RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 HIP1O00291 1037 aa18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 ATP2B1P20020 1258 aa18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 CREB3L3Q68CJ9 461 aa18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
SMARCD1-202ENST00000394963 GJB2P29033 226 aa18.94■□□□□ 0.62
SMARCD1-202ENST00000394963 PAG1Q9NWQ8 432 aa18.94■□□□□ 0.62
SMARCD1-202ENST00000394963 ATP2B3Q16720 1220 aa18.94■□□□□ 0.62
SMARCD1-202ENST00000394963 ATG3Q9NT62 314 aa18.94■□□□□ 0.62
SMARCD1-202ENST00000394963 MCM2P49736 904 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 RAB3GAP1Q15042 981 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 TTC41PQ6P2S7 1318 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 GREM2Q9H772 168 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 WWC3Q9ULE0 1092 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 EYA2O00167 538 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 TRDNQ13061 729 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 CWC22Q9HCG8 908 aaKnown RBP18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 LRP2BPQ9P2M1 347 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 CIZ1Q9ULV3 898 aaPredicted RBP18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 HEG1Q9ULI3 1381 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 TCIRG1Q13488 830 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 PIBF1Q8WXW3 757 aa18.93■□□□□ 0.62
SMARCD1-202ENST00000394963 MON2Q7Z3U7 1717 aa18.92■□□□□ 0.62
SMARCD1-202ENST00000394963 BICD2Q8TD16 824 aa18.92■□□□□ 0.62
SMARCD1-202ENST00000394963 OSBPL3Q9H4L5 887 aa18.92■□□□□ 0.62
SMARCD1-202ENST00000394963 CCDC171Q6TFL3 1326 aa18.92■□□□□ 0.62
SMARCD1-202ENST00000394963 IL15P40933 162 aaPredicted RBP18.92■□□□□ 0.62
SMARCD1-202ENST00000394963 SKOR2Q2VWA4 1001 aaPredicted RBP18.92■□□□□ 0.62
SMARCD1-202ENST00000394963 ANKRD26Q9UPS8 1709 aa18.92■□□□□ 0.62
SMARCD1-202ENST00000394963 TTLL5Q6EMB2 1281 aa18.92■□□□□ 0.62
SMARCD1-202ENST00000394963 CCDC191Q8NCU4 936 aa18.92■□□□□ 0.62
SMARCD1-202ENST00000394963 RXRAP19793 462 aa18.91■□□□□ 0.62
SMARCD1-202ENST00000394963 SETD1AO15047 1707 aaKnown RBP18.91■□□□□ 0.62
SMARCD1-202ENST00000394963 NAP1L5Q96NT1 182 aaPredicted RBP18.91■□□□□ 0.62
SMARCD1-202ENST00000394963 STAP2Q9UGK3 403 aa18.91■□□□□ 0.62
SMARCD1-202ENST00000394963 RAI14Q9P0K7 980 aa18.9■□□□□ 0.62
SMARCD1-202ENST00000394963 CAMK4Q16566 473 aa18.9■□□□□ 0.62
SMARCD1-202ENST00000394963 SLC9C2Q5TAH2 1124 aa18.9■□□□□ 0.62
SMARCD1-202ENST00000394963 XAGE2Q96GT9 111 aa18.9■□□□□ 0.62
SMARCD1-202ENST00000394963 TEX13AQ9BXU3 409 aaPredicted RBP18.9■□□□□ 0.62
SMARCD1-202ENST00000394963 GRPEL1Q9HAV7 217 aa18.9■□□□□ 0.62
SMARCD1-202ENST00000394963 CNPY2Q9Y2B0 182 aa18.9■□□□□ 0.62
SMARCD1-202ENST00000394963 IGHMBP2P38935 993 aaKnown RBP18.89■□□□□ 0.62
SMARCD1-202ENST00000394963 SF3A1Q15459 793 aaKnown RBP18.89■□□□□ 0.62
SMARCD1-202ENST00000394963 VPS53Q5VIR6 699 aa18.89■□□□□ 0.62
SMARCD1-202ENST00000394963 MIGA1Q8NAN2 632 aa18.89■□□□□ 0.62
SMARCD1-202ENST00000394963 KDM6AO15550 1401 aaPredicted RBP18.89■□□□□ 0.61
SMARCD1-202ENST00000394963 MINDY4BA8MYZ0 360 aa18.89■□□□□ 0.61
SMARCD1-202ENST00000394963 ZAP70P43403 619 aa18.89■□□□□ 0.61
SMARCD1-202ENST00000394963 NASPP49321 788 aaPredicted RBP18.89■□□□□ 0.61
SMARCD1-202ENST00000394963 SEC31BQ9NQW1 1179 aa18.89■□□□□ 0.61
SMARCD1-202ENST00000394963 RAD50Q92878 1312 aa18.89■□□□□ 0.61
SMARCD1-202ENST00000394963 LARGE1O95461 756 aa18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 HSPA4P34932 840 aa18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 DNTTIP2Q5QJE6 756 aaKnown RBP18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 NEK1Q96PY6 1258 aa18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 TAF6LQ9Y6J9 622 aa18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 MCMDC2Q4G0Z9 681 aa18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 ZRSR1Q15695 479 aaKnown RBP18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 Q6ZUG5 572 aa18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 AIDAQ96BJ3 306 aa18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 NCOA5Q9HCD5 579 aaKnown RBP18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 ZNF219Q9P2Y4 722 aaPredicted RBP18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 WDR33Q9C0J8 1336 aaKnown RBP18.88■□□□□ 0.61
SMARCD1-202ENST00000394963 SLC27A2O14975 620 aa18.87■□□□□ 0.61
SMARCD1-202ENST00000394963 ZPR1O75312 459 aa18.87■□□□□ 0.61
SMARCD1-202ENST00000394963 AKAP2Q9Y2D5 859 aa18.87■□□□□ 0.61
SMARCD1-202ENST00000394963 STX6O43752 255 aa18.87■□□□□ 0.61
SMARCD1-202ENST00000394963 XRCC6P12956 609 aaKnown RBP eCLIP18.87■□□□□ 0.61
SMARCD1-202ENST00000394963 LSG1Q9H089 658 aaKnown RBP18.87■□□□□ 0.61
SMARCD1-202ENST00000394963 LOC102724428A0A0B4J2F2 783 aa18.86■□□□□ 0.61
SMARCD1-202ENST00000394963 GNPATO15228 680 aa18.86■□□□□ 0.61
SMARCD1-202ENST00000394963 SIK1P57059 783 aa18.86■□□□□ 0.61
SMARCD1-202ENST00000394963 APOBRQ0VD83 1088 aa18.86■□□□□ 0.61
SMARCD1-202ENST00000394963 RAD21O60216 631 aa18.86■□□□□ 0.61
SMARCD1-202ENST00000394963 DNM1Q05193 864 aaKnown RBP18.86■□□□□ 0.61
SMARCD1-202ENST00000394963 CRKLP46109 303 aaKnown RBP18.85■□□□□ 0.61
SMARCD1-202ENST00000394963 TDO2P48775 406 aa18.85■□□□□ 0.61
SMARCD1-202ENST00000394963 LRRFIP1Q32MZ4 808 aaKnown RBP18.85■□□□□ 0.61
SMARCD1-202ENST00000394963 DRC7Q8IY82 874 aa18.85■□□□□ 0.61
SMARCD1-202ENST00000394963 NUP133Q8WUM0 1156 aa18.85■□□□□ 0.61
SMARCD1-202ENST00000394963 COPRSQ9NQ92 184 aa18.85■□□□□ 0.61
SMARCD1-202ENST00000394963 SOS2Q07890 1332 aaPredicted RBP18.85■□□□□ 0.61
SMARCD1-202ENST00000394963 RUFY3Q7L099 469 aa18.85■□□□□ 0.61
SMARCD1-202ENST00000394963 ATP6V1DQ9Y5K8 247 aa18.85■□□□□ 0.61
SMARCD1-202ENST00000394963 AKAP12Q02952 1782 aa18.85■□□□□ 0.61
SMARCD1-202ENST00000394963 SYT1P21579 422 aa18.84■□□□□ 0.61
SMARCD1-202ENST00000394963 SYAP1Q96A49 352 aaPredicted RBP18.84■□□□□ 0.61
SMARCD1-202ENST00000394963 BCL11BQ9C0K0 894 aaPredicted RBP18.84■□□□□ 0.61
SMARCD1-202ENST00000394963 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.84■□□□□ 0.61
SMARCD1-202ENST00000394963 JAK2O60674 1132 aa18.83■□□□□ 0.61
SMARCD1-202ENST00000394963 MRE11P49959 708 aa18.83■□□□□ 0.61
SMARCD1-202ENST00000394963 NBPF5PQ86XG9 351 aaPredicted RBP18.83■□□□□ 0.61
SMARCD1-202ENST00000394963 ME3Q16798 604 aa18.83■□□□□ 0.6
SMARCD1-202ENST00000394963 UTP14AQ9BVJ6 771 aaKnown RBP18.83■□□□□ 0.6
SMARCD1-202ENST00000394963 G3V3G9 751 aa18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 GADD45BO75293 160 aaPredicted RBP18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 DCAF8Q5TAQ9 597 aa18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 USP48Q86UV5 1035 aa18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 ARID3AQ99856 593 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms