RNA–Protein interactions for RNA: ENST00000393544.2

ATF4P4-201, Transcript of activating transcription factor 4 pseudogene 4, humanhuman

BASIC

Gene ATF4P4, Length 1,930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P4-201ENST00000393544 RPGRQ92834 1020 aaKnown RBP16.6■□□□□ 0.25
ATF4P4-201ENST00000393544 CNKSR1Q969H4 720 aa16.6■□□□□ 0.25
ATF4P4-201ENST00000393544 WWC3Q9ULE0 1092 aa16.6■□□□□ 0.25
ATF4P4-201ENST00000393544 ARFGEF1Q9Y6D6 1849 aa16.6■□□□□ 0.25
ATF4P4-201ENST00000393544 CACNA1SQ13698 1873 aa16.6■□□□□ 0.25
ATF4P4-201ENST00000393544 GRM8O00222 908 aa16.59■□□□□ 0.25
ATF4P4-201ENST00000393544 PDE8AO60658 829 aa16.59■□□□□ 0.25
ATF4P4-201ENST00000393544 HOXA10P31260 410 aaPredicted RBP16.59■□□□□ 0.25
ATF4P4-201ENST00000393544 CASP7P55210 303 aa16.59■□□□□ 0.25
ATF4P4-201ENST00000393544 C9orf78Q9NZ63 289 aaPredicted RBP16.59■□□□□ 0.25
ATF4P4-201ENST00000393544 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
ATF4P4-201ENST00000393544 ABCC4O15439 1325 aa16.59■□□□□ 0.25
ATF4P4-201ENST00000393544 YBX3P16989 372 aaKnown RBP eCLIP16.58■□□□□ 0.25
ATF4P4-201ENST00000393544 ALDH1B1P30837 517 aa16.58■□□□□ 0.25
ATF4P4-201ENST00000393544 SF3B3Q15393 1217 aaKnown RBP16.58■□□□□ 0.25
ATF4P4-201ENST00000393544 RBM17Q96I25 401 aaKnown RBP16.58■□□□□ 0.24
ATF4P4-201ENST00000393544 INTS3Q68E01 1043 aaKnown RBP16.57■□□□□ 0.24
ATF4P4-201ENST00000393544 CRAMP1Q96RY5 1269 aa16.57■□□□□ 0.24
ATF4P4-201ENST00000393544 PLA2G12BQ9BX93 195 aa16.57■□□□□ 0.24
ATF4P4-201ENST00000393544 UTYO14607 1347 aa16.57■□□□□ 0.24
ATF4P4-201ENST00000393544 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
ATF4P4-201ENST00000393544 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
ATF4P4-201ENST00000393544 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
ATF4P4-201ENST00000393544 PRPF40BQ6NWY9 871 aaKnown RBP16.56■□□□□ 0.24
ATF4P4-201ENST00000393544 DDX46Q7L014 1031 aaKnown RBP16.56■□□□□ 0.24
ATF4P4-201ENST00000393544 CLUAP1Q96AJ1 413 aa16.56■□□□□ 0.24
ATF4P4-201ENST00000393544 USP44Q9H0E7 712 aa16.56■□□□□ 0.24
ATF4P4-201ENST00000393544 CTSWP56202 376 aa16.55■□□□□ 0.24
ATF4P4-201ENST00000393544 CCDC152Q4G0S7 254 aa16.55■□□□□ 0.24
ATF4P4-201ENST00000393544 NBPF7P0C2Y1 421 aaPredicted RBP16.55■□□□□ 0.24
ATF4P4-201ENST00000393544 FTSJ3Q8IY81 847 aaKnown RBP16.55■□□□□ 0.24
ATF4P4-201ENST00000393544 DZIP1LQ8IYY4 767 aaKnown RBP16.55■□□□□ 0.24
ATF4P4-201ENST00000393544 TTLL11Q8NHH1 800 aa16.54■□□□□ 0.24
ATF4P4-201ENST00000393544 TAF1P21675 1872 aa16.54■□□□□ 0.24
ATF4P4-201ENST00000393544 UTRNP46939 3433 aa16.53■□□□□ 0.24
ATF4P4-201ENST00000393544 FOXO4P98177 505 aa16.53■□□□□ 0.24
ATF4P4-201ENST00000393544 GRAPQ13588 217 aa16.53■□□□□ 0.24
ATF4P4-201ENST00000393544 TMEM57Q8N5G2 664 aa16.53■□□□□ 0.24
ATF4P4-201ENST00000393544 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.53■□□□□ 0.24
ATF4P4-201ENST00000393544 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
ATF4P4-201ENST00000393544 CRBNQ96SW2 442 aa16.53■□□□□ 0.24
ATF4P4-201ENST00000393544 RTL9Q8NET4 1388 aa16.52■□□□□ 0.24
ATF4P4-201ENST00000393544 C21orf2O43822 256 aa16.52■□□□□ 0.23
ATF4P4-201ENST00000393544 BBOX1O75936 387 aa16.52■□□□□ 0.23
ATF4P4-201ENST00000393544 CSF1RP07333 972 aa16.52■□□□□ 0.23
ATF4P4-201ENST00000393544 C7orf43Q8WVR3 580 aa16.52■□□□□ 0.23
ATF4P4-201ENST00000393544 SUCLG2Q96I99 432 aa16.52■□□□□ 0.23
ATF4P4-201ENST00000393544 RLBP1P12271 317 aa16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 SOGA3Q5TF21 947 aa16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 DDRGK1Q96HY6 314 aa16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 CCDC85AQ96PX6 553 aaPredicted RBP16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 PPEF1O14829 653 aaPredicted RBP16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 UBTFL1P0CB47 393 aaPredicted RBP16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 EPHA10Q5JZY3 1008 aa16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 KAZALD1Q96I82 304 aa16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 GREM2Q9H772 168 aa16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 HDAC5Q9UQL6 1122 aa16.51■□□□□ 0.23
ATF4P4-201ENST00000393544 PLIN1O60240 522 aa16.5■□□□□ 0.23
ATF4P4-201ENST00000393544 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
ATF4P4-201ENST00000393544 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
ATF4P4-201ENST00000393544 CELF1Q92879 486 aaKnown RBP16.5■□□□□ 0.23
ATF4P4-201ENST00000393544 MEIS3Q99687 375 aa16.5■□□□□ 0.23
ATF4P4-201ENST00000393544 SEC31BQ9NQW1 1179 aa16.5■□□□□ 0.23
ATF4P4-201ENST00000393544 KDM2BQ8NHM5 1336 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 FER1L6Q2WGJ9 1857 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 GNAI3P08754 354 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 RPS8P62241 208 aaKnown RBP16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 LMBR1LQ6UX01 489 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 COL4A1P02462 1669 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 FAM161AQ3B820 660 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 CCDC93Q567U6 631 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 ITPRIPQ8IWB1 547 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 PANK1Q8TE04 598 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 CDC5LQ99459 802 aaKnown RBP16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 ATP6V0A2Q9Y487 856 aa16.49■□□□□ 0.23
ATF4P4-201ENST00000393544 CHD4Q14839 1912 aa16.48■□□□□ 0.23
ATF4P4-201ENST00000393544 RABL6Q3YEC7 729 aaPredicted RBP16.48■□□□□ 0.23
ATF4P4-201ENST00000393544 SP8Q8IXZ3 490 aa16.48■□□□□ 0.23
ATF4P4-201ENST00000393544 ITGA6P23229 1130 aa16.47■□□□□ 0.23
ATF4P4-201ENST00000393544 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
ATF4P4-201ENST00000393544 GRIPAP1Q4V328 841 aa16.47■□□□□ 0.23
ATF4P4-201ENST00000393544 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
ATF4P4-201ENST00000393544 TMX4Q9H1E5 349 aaPredicted RBP16.47■□□□□ 0.23
ATF4P4-201ENST00000393544 CHMP3Q9Y3E7 222 aa16.47■□□□□ 0.23
ATF4P4-201ENST00000393544 LRRC37AA6NMS7 1700 aa16.47■□□□□ 0.23
ATF4P4-201ENST00000393544 OLFM4Q6UX06 510 aa16.47■□□□□ 0.23
ATF4P4-201ENST00000393544 RTKN2Q8IZC4 609 aa16.47■□□□□ 0.23
ATF4P4-201ENST00000393544 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
ATF4P4-201ENST00000393544 SPEF2Q9C093 1822 aa16.46■□□□□ 0.23
ATF4P4-201ENST00000393544 ANKRD18BA2A2Z9 1011 aa16.46■□□□□ 0.23
ATF4P4-201ENST00000393544 IFIT5Q13325 482 aaKnown RBP16.46■□□□□ 0.23
ATF4P4-201ENST00000393544 LRRFIP2Q9Y608 721 aaKnown RBP16.46■□□□□ 0.23
ATF4P4-201ENST00000393544 SBF1O95248 1867 aa16.45■□□□□ 0.22
ATF4P4-201ENST00000393544 NFKBIEO00221 500 aa16.45■□□□□ 0.22
ATF4P4-201ENST00000393544 CCDC57Q2TAC2 916 aa16.45■□□□□ 0.22
ATF4P4-201ENST00000393544 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
ATF4P4-201ENST00000393544 MVPQ14764 893 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms