RNA–Protein interactions for RNA: ENST00000392789.2

SC5D-202, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-202ENST00000392789 TSGA10IPQ3SY00 556 aa17.47■□□□□ 0.39
SC5D-202ENST00000392789 ZNF589Q86UQ0 364 aaPredicted RBP17.47■□□□□ 0.39
SC5D-202ENST00000392789 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
SC5D-202ENST00000392789 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
SC5D-202ENST00000392789 RPS6KB1P23443 525 aa17.46■□□□□ 0.39
SC5D-202ENST00000392789 MSNP26038 577 aaKnown RBP17.46■□□□□ 0.39
SC5D-202ENST00000392789 CCDC183Q5T5S1 534 aa17.46■□□□□ 0.39
SC5D-202ENST00000392789 NAP1L5Q96NT1 182 aaPredicted RBP17.46■□□□□ 0.39
SC5D-202ENST00000392789 TAF5LO75529 589 aa17.46■□□□□ 0.39
SC5D-202ENST00000392789 ZCRB1Q8TBF4 217 aaKnown RBP17.46■□□□□ 0.39
SC5D-202ENST00000392789 EDC3Q96F86 508 aaKnown RBP17.46■□□□□ 0.39
SC5D-202ENST00000392789 PAPPAQ13219 1627 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 NBPF26B4DH59 902 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 ERVV-2B6SEH9 535 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
SC5D-202ENST00000392789 KRT32Q14532 448 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 NBPF14Q5TI25 921 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 USPL1Q5W0Q7 1092 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 NBPF10Q6P3W6 841 aaKnown RBP17.45■□□□□ 0.38
SC5D-202ENST00000392789 LMBR1LQ6UX01 489 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 NBPF15Q8N660 670 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 PRDM11Q9NQV5 511 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 XIRP1Q702N8 1843 aaKnown RBP17.45■□□□□ 0.38
SC5D-202ENST00000392789 H7C1W4 665 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 FIBPO43427 364 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 TOM1L2Q6ZVM7 507 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 NECAB1Q8N987 351 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 RNF214Q8ND24 703 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 HAUS7Q99871 368 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 DBNDD2Q9BQY9 259 aa17.45■□□□□ 0.38
SC5D-202ENST00000392789 TJP1Q07157 1748 aa17.44■□□□□ 0.38
SC5D-202ENST00000392789 BRINP3Q76B58 766 aa17.44■□□□□ 0.38
SC5D-202ENST00000392789 CWC25Q9NXE8 425 aaPredicted RBP17.44■□□□□ 0.38
SC5D-202ENST00000392789 KCPQ6ZWJ8 1503 aa17.44■□□□□ 0.38
SC5D-202ENST00000392789 VPS37CA5D8V6 355 aaPredicted RBP17.44■□□□□ 0.38
SC5D-202ENST00000392789 PDCP20941 246 aa17.44■□□□□ 0.38
SC5D-202ENST00000392789 FOXO4P98177 505 aa17.44■□□□□ 0.38
SC5D-202ENST00000392789 FAM184AQ8NB25 1140 aa17.44■□□□□ 0.38
SC5D-202ENST00000392789 DNAJC2Q99543 621 aaKnown RBP17.44■□□□□ 0.38
SC5D-202ENST00000392789 COL5A2P05997 1499 aaPredicted RBP17.43■□□□□ 0.38
SC5D-202ENST00000392789 KLHL34Q8N239 644 aa17.43■□□□□ 0.38
SC5D-202ENST00000392789 ZNF609O15014 1411 aa17.43■□□□□ 0.38
SC5D-202ENST00000392789 LARP1BQ659C4 914 aaKnown RBP17.42■□□□□ 0.38
SC5D-202ENST00000392789 NOL7Q9UMY1 257 aaKnown RBP17.42■□□□□ 0.38
SC5D-202ENST00000392789 CHMP3Q9Y3E7 222 aa17.42■□□□□ 0.38
SC5D-202ENST00000392789 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
SC5D-202ENST00000392789 DNM1Q05193 864 aaKnown RBP17.42■□□□□ 0.38
SC5D-202ENST00000392789 TOB2Q14106 344 aaPredicted RBP17.42■□□□□ 0.38
SC5D-202ENST00000392789 NKX1-1Q15270 411 aaPredicted RBP17.42■□□□□ 0.38
SC5D-202ENST00000392789 TAF6LQ9Y6J9 622 aa17.42■□□□□ 0.38
SC5D-202ENST00000392789 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
SC5D-202ENST00000392789 TTLL7Q6ZT98 887 aa17.41■□□□□ 0.38
SC5D-202ENST00000392789 GPR108Q9NPR9 543 aa17.41■□□□□ 0.38
SC5D-202ENST00000392789 COL9A3Q14050 684 aaPredicted RBP17.41■□□□□ 0.38
SC5D-202ENST00000392789 TCEANC2Q96MN5 208 aa17.41■□□□□ 0.38
SC5D-202ENST00000392789 CCDC39Q9UFE4 941 aa17.41■□□□□ 0.38
SC5D-202ENST00000392789 PALLDQ8WX93 1383 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 SH3TC1Q8TE82 1336 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 UVSSAQ2YD98 709 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 ATG9AQ7Z3C6 839 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 TICAM2Q86XR7 235 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 KBTBD3Q8NAB2 608 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 CCDC191Q8NCU4 936 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 NDUFB9Q9Y6M9 179 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 SHANK3Q9BYB0 1731 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 IL2RBP14784 551 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 IL15P40933 162 aaPredicted RBP17.4■□□□□ 0.38
SC5D-202ENST00000392789 DDX46Q7L014 1031 aaKnown RBP17.4■□□□□ 0.38
SC5D-202ENST00000392789 NEK1Q96PY6 1258 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 TNS2Q63HR2 1409 aa17.4■□□□□ 0.38
SC5D-202ENST00000392789 SOS2Q07890 1332 aaPredicted RBP17.39■□□□□ 0.37
SC5D-202ENST00000392789 ABCA3Q99758 1704 aa17.39■□□□□ 0.37
SC5D-202ENST00000392789 DTNBO60941 627 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 A1BGP04217 495 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 KRT85P78386 507 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 CARD10Q9BWT7 1032 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 MCM5P33992 734 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 CCDC129Q6ZRS4 1044 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 CDC37L1Q7L3B6 337 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 NEUROD6Q96NK8 337 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 ATG3Q9NT62 314 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 ZKSCAN5Q9Y2L8 839 aa17.38■□□□□ 0.37
SC5D-202ENST00000392789 SEC62Q99442 399 aaKnown RBP17.37■□□□□ 0.37
SC5D-202ENST00000392789 PAG1Q9NWQ8 432 aa17.37■□□□□ 0.37
SC5D-202ENST00000392789 RRP9O43818 475 aaKnown RBP17.37■□□□□ 0.37
SC5D-202ENST00000392789 ZNF500O60304 480 aaPredicted RBP17.37■□□□□ 0.37
SC5D-202ENST00000392789 HSPA2P54652 639 aa17.37■□□□□ 0.37
SC5D-202ENST00000392789 TPRNQ4KMQ1 711 aa17.37■□□□□ 0.37
SC5D-202ENST00000392789 HELLSQ9NRZ9 838 aa17.37■□□□□ 0.37
SC5D-202ENST00000392789 ELP1O95163 1332 aa17.37■□□□□ 0.37
SC5D-202ENST00000392789 SPEF2Q9C093 1822 aa17.36■□□□□ 0.37
SC5D-202ENST00000392789 EYA2O00167 538 aa17.36■□□□□ 0.37
SC5D-202ENST00000392789 CIAO1O76071 339 aa17.36■□□□□ 0.37
SC5D-202ENST00000392789 CYP21A2P08686 494 aa17.36■□□□□ 0.37
SC5D-202ENST00000392789 GTF3C6Q969F1 213 aa17.36■□□□□ 0.37
SC5D-202ENST00000392789 GOLIM4O00461 696 aa17.36■□□□□ 0.37
SC5D-202ENST00000392789 STK3Q13188 491 aa17.36■□□□□ 0.37
SC5D-202ENST00000392789 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.36■□□□□ 0.37
SC5D-202ENST00000392789 CHGBP05060 677 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms