RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 TSGA10IPQ3SY00 556 aa14.7□□□□□ -0.06
RFC5-201ENST00000392542 NECAB1Q8N987 351 aa14.7□□□□□ -0.06
RFC5-201ENST00000392542 EDC3Q96F86 508 aaKnown RBP14.7□□□□□ -0.06
RFC5-201ENST00000392542 UBR2Q8IWV8 1755 aa14.69□□□□□ -0.06
RFC5-201ENST00000392542 FIBPO43427 364 aa14.69□□□□□ -0.06
RFC5-201ENST00000392542 TAF5LO75529 589 aa14.69□□□□□ -0.06
RFC5-201ENST00000392542 NOL7Q9UMY1 257 aaKnown RBP14.69□□□□□ -0.06
RFC5-201ENST00000392542 NUP188Q5SRE5 1749 aa14.69□□□□□ -0.06
RFC5-201ENST00000392542 LETM1O95202 739 aaPredicted RBP14.68□□□□□ -0.06
RFC5-201ENST00000392542 PDIA4P13667 645 aaKnown RBP14.68□□□□□ -0.06
RFC5-201ENST00000392542 USPL1Q5W0Q7 1092 aa14.68□□□□□ -0.06
RFC5-201ENST00000392542 COL9A3Q14050 684 aaPredicted RBP14.68□□□□□ -0.06
RFC5-201ENST00000392542 DBNDD2Q9BQY9 259 aa14.68□□□□□ -0.06
RFC5-201ENST00000392542 TAF6LQ9Y6J9 622 aa14.68□□□□□ -0.06
RFC5-201ENST00000392542 VPS37CA5D8V6 355 aaPredicted RBP14.67□□□□□ -0.06
RFC5-201ENST00000392542 NBPF26B4DH59 902 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 H7C1W4 665 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 DNM1Q05193 864 aaKnown RBP14.67□□□□□ -0.06
RFC5-201ENST00000392542 NBPF14Q5TI25 921 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 NBPF10Q6P3W6 841 aaKnown RBP14.67□□□□□ -0.06
RFC5-201ENST00000392542 NBPF15Q8N660 670 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 FAM184AQ8NB25 1140 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 TJP1Q07157 1748 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 PCDH11XQ9BZA7 1347 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 PCDH11YQ9BZA8 1340 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 DTNBO60941 627 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 KRT32Q14532 448 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 LMBR1LQ6UX01 489 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 HAUS7Q99871 368 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 ZNF609O15014 1411 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 WDR17Q8IZU2 1322 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 PAPPAQ13219 1627 aa14.67□□□□□ -0.06
RFC5-201ENST00000392542 FOXO4P98177 505 aa14.66□□□□□ -0.06
RFC5-201ENST00000392542 TOB2Q14106 344 aaPredicted RBP14.66□□□□□ -0.06
RFC5-201ENST00000392542 UVSSAQ2YD98 709 aa14.66□□□□□ -0.06
RFC5-201ENST00000392542 LARP1BQ659C4 914 aaKnown RBP14.66□□□□□ -0.06
RFC5-201ENST00000392542 CCDC39Q9UFE4 941 aa14.66□□□□□ -0.06
RFC5-201ENST00000392542 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
RFC5-201ENST00000392542 PDCP20941 246 aa14.66□□□□□ -0.06
RFC5-201ENST00000392542 KLHL34Q8N239 644 aa14.66□□□□□ -0.06
RFC5-201ENST00000392542 ZCRB1Q8TBF4 217 aaKnown RBP14.66□□□□□ -0.06
RFC5-201ENST00000392542 TCEANC2Q96MN5 208 aa14.66□□□□□ -0.06
RFC5-201ENST00000392542 DNAJC2Q99543 621 aaKnown RBP14.66□□□□□ -0.06
RFC5-201ENST00000392542 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.66□□□□□ -0.06
RFC5-201ENST00000392542 KCPQ6ZWJ8 1503 aa14.66□□□□□ -0.06
RFC5-201ENST00000392542 ERVV-2B6SEH9 535 aa14.65□□□□□ -0.06
RFC5-201ENST00000392542 CWC25Q9NXE8 425 aaPredicted RBP14.65□□□□□ -0.06
RFC5-201ENST00000392542 NDUFB9Q9Y6M9 179 aa14.65□□□□□ -0.06
RFC5-201ENST00000392542 TTLL7Q6ZT98 887 aa14.65□□□□□ -0.06
RFC5-201ENST00000392542 ZKSCAN5Q9Y2L8 839 aa14.65□□□□□ -0.06
RFC5-201ENST00000392542 U3KPZ7 1027 aaPredicted RBP14.65□□□□□ -0.06
RFC5-201ENST00000392542 ZNF500O60304 480 aaPredicted RBP14.64□□□□□ -0.07
RFC5-201ENST00000392542 MCMDC2Q4G0Z9 681 aa14.64□□□□□ -0.07
RFC5-201ENST00000392542 GPR108Q9NPR9 543 aa14.64□□□□□ -0.07
RFC5-201ENST00000392542 CHMP3Q9Y3E7 222 aa14.64□□□□□ -0.07
RFC5-201ENST00000392542 MCM5P33992 734 aa14.64□□□□□ -0.07
RFC5-201ENST00000392542 TOM1L2Q6ZVM7 507 aa14.64□□□□□ -0.07
RFC5-201ENST00000392542 ATG9AQ7Z3C6 839 aa14.64□□□□□ -0.07
RFC5-201ENST00000392542 KBTBD3Q8NAB2 608 aa14.64□□□□□ -0.07
RFC5-201ENST00000392542 PRDM11Q9NQV5 511 aa14.64□□□□□ -0.07
RFC5-201ENST00000392542 OFD1O75665 1012 aa14.63□□□□□ -0.07
RFC5-201ENST00000392542 TPRNQ4KMQ1 711 aa14.63□□□□□ -0.07
RFC5-201ENST00000392542 CCDC129Q6ZRS4 1044 aa14.63□□□□□ -0.07
RFC5-201ENST00000392542 BRINP3Q76B58 766 aa14.63□□□□□ -0.07
RFC5-201ENST00000392542 DDX46Q7L014 1031 aaKnown RBP14.63□□□□□ -0.07
RFC5-201ENST00000392542 CDC37L1Q7L3B6 337 aa14.63□□□□□ -0.07
RFC5-201ENST00000392542 NEK1Q96PY6 1258 aa14.63□□□□□ -0.07
RFC5-201ENST00000392542 SH3TC1Q8TE82 1336 aa14.63□□□□□ -0.07
RFC5-201ENST00000392542 PALLDQ8WX93 1383 aa14.63□□□□□ -0.07
RFC5-201ENST00000392542 NKX1-1Q15270 411 aaPredicted RBP14.63□□□□□ -0.07
RFC5-201ENST00000392542 SEC62Q99442 399 aaKnown RBP14.63□□□□□ -0.07
RFC5-201ENST00000392542 COL5A2P05997 1499 aaPredicted RBP14.63□□□□□ -0.07
RFC5-201ENST00000392542 SHANK3Q9BYB0 1731 aa14.62□□□□□ -0.07
RFC5-201ENST00000392542 CHGBP05060 677 aa14.62□□□□□ -0.07
RFC5-201ENST00000392542 IL15P40933 162 aaPredicted RBP14.62□□□□□ -0.07
RFC5-201ENST00000392542 KRT85P78386 507 aa14.62□□□□□ -0.07
RFC5-201ENST00000392542 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.62□□□□□ -0.07
RFC5-201ENST00000392542 A1BGP04217 495 aa14.62□□□□□ -0.07
RFC5-201ENST00000392542 CCDC191Q8NCU4 936 aa14.62□□□□□ -0.07
RFC5-201ENST00000392542 TNS2Q63HR2 1409 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 ELP1O95163 1332 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 CYP21A2P08686 494 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 STK3Q13188 491 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 TICAM2Q86XR7 235 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 GTF3C6Q969F1 213 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 FUCA2Q9BTY2 467 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 TTC6Q86TZ1 520 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 FERMT3Q86UX7 667 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 PAG1Q9NWQ8 432 aa14.61□□□□□ -0.07
RFC5-201ENST00000392542 LAMA4Q16363 1823 aa14.6□□□□□ -0.07
RFC5-201ENST00000392542 EYA2O00167 538 aa14.6□□□□□ -0.07
RFC5-201ENST00000392542 HCLS1P14317 486 aaPredicted RBP14.6□□□□□ -0.07
RFC5-201ENST00000392542 IL2RBP14784 551 aa14.6□□□□□ -0.07
RFC5-201ENST00000392542 Q6ZUG5 572 aa14.6□□□□□ -0.07
RFC5-201ENST00000392542 ZBTB3Q9H5J0 574 aa14.6□□□□□ -0.07
RFC5-201ENST00000392542 HELLSQ9NRZ9 838 aa14.6□□□□□ -0.07
RFC5-201ENST00000392542 SPEF2Q9C093 1822 aa14.6□□□□□ -0.07
RFC5-201ENST00000392542 ABCA3Q99758 1704 aa14.6□□□□□ -0.07
RFC5-201ENST00000392542 GIMAP6Q6P9H5 292 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms