RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 CERS3Q8IU89 383 aa20.89■□□□□ 0.93
TFRC-202ENST00000392396 ERMNQ8TAM6 284 aa20.89■□□□□ 0.93
TFRC-202ENST00000392396 SLC52A2Q9HAB3 445 aa20.89■□□□□ 0.93
TFRC-202ENST00000392396 SLC9C2Q5TAH2 1124 aa20.89■□□□□ 0.93
TFRC-202ENST00000392396 DEKP35659 375 aaKnown RBP20.88■□□□□ 0.93
TFRC-202ENST00000392396 TNNT3P45378 269 aaPredicted RBP20.88■□□□□ 0.93
TFRC-202ENST00000392396 CCDC148Q8NFR7 591 aa20.88■□□□□ 0.93
TFRC-202ENST00000392396 CALML4Q96GE6 196 aa20.88■□□□□ 0.93
TFRC-202ENST00000392396 WTAPQ15007 396 aa20.88■□□□□ 0.93
TFRC-202ENST00000392396 CNKSR1Q969H4 720 aa20.88■□□□□ 0.93
TFRC-202ENST00000392396 TNMDQ9H2S6 317 aa20.88■□□□□ 0.93
TFRC-202ENST00000392396 PDE8AO60658 829 aa20.88■□□□□ 0.93
TFRC-202ENST00000392396 MAST1Q9Y2H9 1570 aa20.88■□□□□ 0.93
TFRC-202ENST00000392396 CA8P35219 290 aa20.88■□□□□ 0.93
TFRC-202ENST00000392396 FGFR1OPO95684 399 aaKnown RBP20.87■□□□□ 0.93
TFRC-202ENST00000392396 NBPF7P0C2Y1 421 aaPredicted RBP20.87■□□□□ 0.93
TFRC-202ENST00000392396 NCBP1Q09161 790 aaKnown RBP20.87■□□□□ 0.93
TFRC-202ENST00000392396 PLEKHG1Q9ULL1 1385 aa20.87■□□□□ 0.93
TFRC-202ENST00000392396 CCP110O43303 1012 aa20.87■□□□□ 0.93
TFRC-202ENST00000392396 HIBADHP31937 336 aaKnown RBP20.87■□□□□ 0.93
TFRC-202ENST00000392396 CCDC191Q8NCU4 936 aa20.87■□□□□ 0.93
TFRC-202ENST00000392396 HOXB7P09629 217 aa20.87■□□□□ 0.93
TFRC-202ENST00000392396 LIG1P18858 919 aa20.87■□□□□ 0.93
TFRC-202ENST00000392396 CETN2P41208 172 aa20.87■□□□□ 0.93
TFRC-202ENST00000392396 CETN1Q12798 172 aa20.87■□□□□ 0.93
TFRC-202ENST00000392396 SMARCC2Q8TAQ2 1214 aa20.87■□□□□ 0.93
TFRC-202ENST00000392396 FBXO3Q9UK99 471 aa20.87■□□□□ 0.93
TFRC-202ENST00000392396 MCM9Q9NXL9 1143 aa20.86■□□□□ 0.93
TFRC-202ENST00000392396 HELBQ8NG08 1087 aaPredicted RBP20.86■□□□□ 0.93
TFRC-202ENST00000392396 PPIP5K2O43314 1243 aa20.86■□□□□ 0.93
TFRC-202ENST00000392396 IFIT1BQ5T764 474 aaKnown RBP20.86■□□□□ 0.93
TFRC-202ENST00000392396 MCM5P33992 734 aa20.86■□□□□ 0.93
TFRC-202ENST00000392396 MAP3K9P80192 1104 aa20.86■□□□□ 0.93
TFRC-202ENST00000392396 MPNDQ8N594 471 aa20.86■□□□□ 0.93
TFRC-202ENST00000392396 MNS1Q8NEH6 495 aa20.86■□□□□ 0.93
TFRC-202ENST00000392396 CBFA2T2O43439 604 aa20.85■□□□□ 0.93
TFRC-202ENST00000392396 AMPD3Q01432 767 aa20.85■□□□□ 0.93
TFRC-202ENST00000392396 DNAJC10Q8IXB1 793 aa20.85■□□□□ 0.93
TFRC-202ENST00000392396 LRRC27Q9C0I9 530 aa20.85■□□□□ 0.93
TFRC-202ENST00000392396 PRPF40AO75400 957 aaKnown RBP20.85■□□□□ 0.93
TFRC-202ENST00000392396 CCDC192P0DO97 292 aa20.85■□□□□ 0.93
TFRC-202ENST00000392396 HAND2P61296 217 aa20.85■□□□□ 0.93
TFRC-202ENST00000392396 ARHGEF6Q15052 776 aa20.85■□□□□ 0.93
TFRC-202ENST00000392396 RBM27Q9P2N5 1060 aaKnown RBP20.85■□□□□ 0.93
TFRC-202ENST00000392396 POLR3AO14802 1390 aaPredicted RBP20.84■□□□□ 0.93
TFRC-202ENST00000392396 METAP2P50579 478 aaKnown RBP eCLIP20.84■□□□□ 0.93
TFRC-202ENST00000392396 WDR66Q8TBY9 1149 aa20.84■□□□□ 0.93
TFRC-202ENST00000392396 USP16Q9Y5T5 823 aa20.84■□□□□ 0.93
TFRC-202ENST00000392396 TNFAIP1Q13829 316 aa20.84■□□□□ 0.93
TFRC-202ENST00000392396 PYM1Q9BRP8 204 aaKnown RBP20.84■□□□□ 0.93
TFRC-202ENST00000392396 NLRP1Q9C000 1473 aa20.83■□□□□ 0.93
TFRC-202ENST00000392396 CCDC181Q5TID7 509 aa20.83■□□□□ 0.93
TFRC-202ENST00000392396 MICU3Q86XE3 530 aa20.83■□□□□ 0.93
TFRC-202ENST00000392396 ZNF335Q9H4Z2 1342 aaPredicted RBP20.83■□□□□ 0.92
TFRC-202ENST00000392396 MSL1Q68DK7 614 aa20.83■□□□□ 0.92
TFRC-202ENST00000392396 TEX11Q8IYF3 940 aa20.83■□□□□ 0.92
TFRC-202ENST00000392396 PTPRKQ15262 1439 aa20.83■□□□□ 0.92
TFRC-202ENST00000392396 TTLL5Q6EMB2 1281 aa20.83■□□□□ 0.92
TFRC-202ENST00000392396 TRIM37O94972 964 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 KIF22Q14807 665 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 FAM89AQ96GI7 184 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 UGGT1Q9NYU2 1555 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 HCLS1P14317 486 aaPredicted RBP20.82■□□□□ 0.92
TFRC-202ENST00000392396 TRMT1LQ7Z2T5 733 aaKnown RBP20.82■□□□□ 0.92
TFRC-202ENST00000392396 CCDC83Q8IWF9 413 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 ACBD3Q9H3P7 528 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 EIF5P55010 431 aaKnown RBP20.82■□□□□ 0.92
TFRC-202ENST00000392396 CCDC184Q52MB2 194 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 C2CD5Q86YS7 1000 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 DLGAP5Q15398 846 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 TBC1D22AQ8WUA7 517 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 ARHGEF10LQ9HCE6 1279 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 NOD1Q9Y239 953 aa20.82■□□□□ 0.92
TFRC-202ENST00000392396 HSP90AA2PQ14568 343 aaPredicted RBP20.81■□□□□ 0.92
TFRC-202ENST00000392396 EFCAB6Q5THR3 1501 aa20.81■□□□□ 0.92
TFRC-202ENST00000392396 ATP8B2P98198 1209 aa20.81■□□□□ 0.92
TFRC-202ENST00000392396 CALM1P0DP23 149 aa20.81■□□□□ 0.92
TFRC-202ENST00000392396 CALM2P0DP24 149 aa20.81■□□□□ 0.92
TFRC-202ENST00000392396 CALM3P0DP25 149 aa20.81■□□□□ 0.92
TFRC-202ENST00000392396 PPM1FP49593 454 aaPredicted RBP20.81■□□□□ 0.92
TFRC-202ENST00000392396 NEK1Q96PY6 1258 aa20.81■□□□□ 0.92
TFRC-202ENST00000392396 C8orf58Q8NAV2 365 aa20.81■□□□□ 0.92
TFRC-202ENST00000392396 UNC5CLQ8IV45 518 aa20.8■□□□□ 0.92
TFRC-202ENST00000392396 UPF3BQ9BZI7 483 aaKnown RBP20.8■□□□□ 0.92
TFRC-202ENST00000392396 C6orf50Q9HD87 102 aa20.8■□□□□ 0.92
TFRC-202ENST00000392396 SPDYE3A6NKU9 549 aa20.8■□□□□ 0.92
TFRC-202ENST00000392396 TSHZ2Q9NRE2 1034 aa20.8■□□□□ 0.92
TFRC-202ENST00000392396 ERLIN2O94905 339 aa20.8■□□□□ 0.92
TFRC-202ENST00000392396 UBA7P41226 1012 aa20.8■□□□□ 0.92
TFRC-202ENST00000392396 ITGA6P23229 1130 aa20.79■□□□□ 0.92
TFRC-202ENST00000392396 TSPY26PQ9H489 355 aa20.79■□□□□ 0.92
TFRC-202ENST00000392396 PAG1Q9NWQ8 432 aa20.79■□□□□ 0.92
TFRC-202ENST00000392396 CWF19L2Q2TBE0 894 aaKnown RBP20.79■□□□□ 0.92
TFRC-202ENST00000392396 USP48Q86UV5 1035 aa20.79■□□□□ 0.92
TFRC-202ENST00000392396 METTL22Q9BUU2 404 aaPredicted RBP20.79■□□□□ 0.92
TFRC-202ENST00000392396 GPHNQ9NQX3 736 aaPredicted RBP20.79■□□□□ 0.92
TFRC-202ENST00000392396 CSADQ9Y600 493 aa20.79■□□□□ 0.92
TFRC-202ENST00000392396 TBCAO75347 108 aaKnown RBP20.79■□□□□ 0.92
TFRC-202ENST00000392396 PUM3Q15397 648 aaKnown RBP20.79■□□□□ 0.92
TFRC-202ENST00000392396 IL27Q8NEV9 243 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 853.8 ms