RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 PPP1R13BQ96KQ4 1090 aa19.64■□□□□ 0.73
TRAF3IP1-202ENST00000391993 A0A1W2PP64 1363 aa19.64■□□□□ 0.73
TRAF3IP1-202ENST00000391993 WDHD1O75717 1129 aaPredicted RBP19.64■□□□□ 0.73
TRAF3IP1-202ENST00000391993 MATR3P43243 847 aaKnown RBP eCLIP19.64■□□□□ 0.73
TRAF3IP1-202ENST00000391993 BANK1Q8NDB2 785 aa19.64■□□□□ 0.73
TRAF3IP1-202ENST00000391993 RALYLQ86SE5 291 aaKnown RBP19.63■□□□□ 0.73
TRAF3IP1-202ENST00000391993 SLC26A8Q96RN1 970 aa19.63■□□□□ 0.73
TRAF3IP1-202ENST00000391993 CAVIN2O95810 425 aa19.63■□□□□ 0.73
TRAF3IP1-202ENST00000391993 ADGRL2O95490 1459 aa19.63■□□□□ 0.73
TRAF3IP1-202ENST00000391993 NCKAP5LQ9HCH0 1330 aa19.63■□□□□ 0.73
TRAF3IP1-202ENST00000391993 HSP90AB2PQ58FF8 381 aa19.63■□□□□ 0.73
TRAF3IP1-202ENST00000391993 PI4KAP2A4QPH2 592 aa19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 HAND2P61296 217 aa19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 PI4KAP1Q8N8J0 262 aa19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 MRPS27Q92552 414 aaKnown RBP19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 TICAM2Q86XR7 235 aa19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 NEK1Q96PY6 1258 aa19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 HYPKQ9NX55 129 aa19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 CYP2C19P33261 490 aa19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 LONRF3Q496Y0 759 aa19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 TDRD7Q8NHU6 1098 aaKnown RBP19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 IL25Q9H293 177 aa19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 RGS12O14924 1447 aa19.62■□□□□ 0.73
TRAF3IP1-202ENST00000391993 CDR1P51861 262 aa19.61■□□□□ 0.73
TRAF3IP1-202ENST00000391993 SSBP05455 408 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRAF3IP1-202ENST00000391993 USP8P40818 1118 aa19.61■□□□□ 0.73
TRAF3IP1-202ENST00000391993 RIC3Q7Z5B4 369 aa19.61■□□□□ 0.73
TRAF3IP1-202ENST00000391993 C8orf76Q96K31 380 aa19.61■□□□□ 0.73
TRAF3IP1-202ENST00000391993 ZNF569Q5MCW4 686 aa19.61■□□□□ 0.73
TRAF3IP1-202ENST00000391993 CEP57Q86XR8 500 aa19.61■□□□□ 0.73
TRAF3IP1-202ENST00000391993 LRRN4CLQ8ND94 238 aa19.61■□□□□ 0.73
TRAF3IP1-202ENST00000391993 PLA2R1Q13018 1463 aa19.61■□□□□ 0.73
TRAF3IP1-202ENST00000391993 CPLX2Q6PUV4 134 aaKnown RBP19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 ANKRD20A12PQ8NF67 263 aa19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 ADAM21Q9UKJ8 722 aa19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 APOBRQ0VD83 1088 aa19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 EDC3Q96F86 508 aaKnown RBP19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 MYCBPQ99417 103 aaPredicted RBP19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 PHAXQ9H814 394 aaKnown RBP19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 SHTN1A0MZ66 631 aa19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 ADKP55263 362 aaKnown RBP19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 FANCCQ00597 558 aa19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 CAPZA3Q96KX2 299 aa19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 ERC1Q8IUD2 1116 aa19.6■□□□□ 0.73
TRAF3IP1-202ENST00000391993 ITSN2Q9NZM3 1697 aa19.59■□□□□ 0.73
TRAF3IP1-202ENST00000391993 TDO2P48775 406 aa19.59■□□□□ 0.73
TRAF3IP1-202ENST00000391993 LRRFIP1Q32MZ4 808 aaKnown RBP19.59■□□□□ 0.73
TRAF3IP1-202ENST00000391993 ICE2Q659A1 982 aa19.59■□□□□ 0.73
TRAF3IP1-202ENST00000391993 USHBP1Q8N6Y0 703 aa19.59■□□□□ 0.73
TRAF3IP1-202ENST00000391993 HIP1O00291 1037 aa19.59■□□□□ 0.73
TRAF3IP1-202ENST00000391993 DHX16O60231 1041 aaKnown RBP19.59■□□□□ 0.73
TRAF3IP1-202ENST00000391993 SYCP1Q15431 976 aa19.59■□□□□ 0.73
TRAF3IP1-202ENST00000391993 CCDC129Q6ZRS4 1044 aa19.59■□□□□ 0.73
TRAF3IP1-202ENST00000391993 FAN1Q9Y2M0 1017 aa19.59■□□□□ 0.73
TRAF3IP1-202ENST00000391993 SYNMO15061 1565 aa19.58■□□□□ 0.73
TRAF3IP1-202ENST00000391993 ZEB2O60315 1214 aa19.58■□□□□ 0.73
TRAF3IP1-202ENST00000391993 CNNM3Q8NE01 707 aa19.58■□□□□ 0.73
TRAF3IP1-202ENST00000391993 DDX46Q7L014 1031 aaKnown RBP19.58■□□□□ 0.72
TRAF3IP1-202ENST00000391993 SYCP2Q9BX26 1530 aa19.58■□□□□ 0.72
TRAF3IP1-202ENST00000391993 STX17P56962 302 aa19.58■□□□□ 0.72
TRAF3IP1-202ENST00000391993 TTC19Q6DKK2 380 aaPredicted RBP19.58■□□□□ 0.72
TRAF3IP1-202ENST00000391993 CHMP4BP1P59074 171 aa19.57■□□□□ 0.72
TRAF3IP1-202ENST00000391993 SF3A3Q12874 501 aaKnown RBP eCLIP19.57■□□□□ 0.72
TRAF3IP1-202ENST00000391993 MTX1Q13505 466 aa19.57■□□□□ 0.72
TRAF3IP1-202ENST00000391993 NBPF11Q86T75 865 aa19.57■□□□□ 0.72
TRAF3IP1-202ENST00000391993 SECISBP2LQ93073 1101 aaKnown RBP19.57■□□□□ 0.72
TRAF3IP1-202ENST00000391993 USP28Q96RU2 1077 aa19.57■□□□□ 0.72
TRAF3IP1-202ENST00000391993 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.57■□□□□ 0.72
TRAF3IP1-202ENST00000391993 TRDNQ13061 729 aa19.57■□□□□ 0.72
TRAF3IP1-202ENST00000391993 NEXNQ0ZGT2 675 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 FILIP1LQ4L180 1135 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 MRFAP1L1Q96HT8 127 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 BAG1Q99933 345 aaPredicted RBP19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 CD109Q6YHK3 1445 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 FAM160A1Q05DH4 1040 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 DPCR1Q3MIW9 517 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 GOLGA5Q8TBA6 731 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 EVI5LQ96CN4 794 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 ZSCAN16Q9H4T2 348 aaPredicted RBP19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 ORC3Q9UBD5 711 aaPredicted RBP19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 EBAG9O00559 213 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 ACTN2P35609 894 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 PARD6BQ9BYG5 372 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 LCMT1Q9UIC8 334 aa19.56■□□□□ 0.72
TRAF3IP1-202ENST00000391993 MYL6BP14649 208 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 MAP2K2P36507 400 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 SYKP43405 635 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 LONRF2Q1L5Z9 754 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 CCDC91Q7Z6B0 441 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 GBP3Q9H0R5 595 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 SOS1Q07889 1333 aaPredicted RBP19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 PTPDC1A2A3K4 754 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 CTAGE15A4D2H0 777 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 CTAGE8P0CG41 777 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 SPECC1Q5M775 1068 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 HDXQ7Z353 690 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 CTAGE6Q86UF2 777 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 CTAGE4Q8IX94 777 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms