RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 NUP98P52948 1817 aa8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 H7C1D1 291 aa8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 KIAA2012Q0VF49 1180 aa8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 RBM26Q5T8P6 1007 aaKnown RBP8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 SUSD4Q5VX71 490 aa8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 MOB2Q70IA6 237 aa8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 NGEFQ8N5V2 710 aa8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 RTFDC1Q9BY42 306 aaPredicted RBP8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 R3HDMLQ9H3Y0 253 aa8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 ABCC4O15439 1325 aa8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 CENPFP49454 3210 aa8.46□□□□□ -1.06
TRAV1-2-201ENST00000390423 RGL2O15211 777 aa8.45□□□□□ -1.06
TRAV1-2-201ENST00000390423 SNRPA1P09661 255 aaKnown RBP8.45□□□□□ -1.06
TRAV1-2-201ENST00000390423 TNIP1Q15025 636 aa8.45□□□□□ -1.06
TRAV1-2-201ENST00000390423 CDCA5Q96FF9 252 aa8.45□□□□□ -1.06
TRAV1-2-201ENST00000390423 NYXQ9GZU5 481 aa8.45□□□□□ -1.06
TRAV1-2-201ENST00000390423 LAMB2P55268 1798 aa8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 GPR25O00155 361 aa8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 PSMD14O00487 310 aa8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 NTSR2O95665 410 aa8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 DPP8Q6V1X1 898 aaPredicted RBP8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 TTLL7Q6ZT98 887 aa8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 DCPSQ96C86 337 aaKnown RBP8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 VPS33BQ9H267 617 aa8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 KCNQ5Q9NR82 932 aa8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 GGA3Q9NZ52 723 aa8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 SCAF8Q9UPN6 1271 aaKnown RBP8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 TRIOBPQ9H2D6 2365 aa8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 TAF1P21675 1872 aa8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 COL3A1P02461 1466 aaPredicted RBP8.44□□□□□ -1.06
TRAV1-2-201ENST00000390423 LAMB4A4D0S4 1761 aa8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 RBBP6Q7Z6E9 1792 aaKnown RBP8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 DIAPH1O60610 1272 aaKnown RBP8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 EN2P19622 333 aaPredicted RBP8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 MKRN3Q13064 507 aaKnown RBP8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 MPNDQ8N594 471 aa8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 SUPT20HQ8NEM7 779 aa8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 PHACTR3Q96KR7 559 aa8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 DBNDD1Q9H9R9 158 aa8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 RTL9Q8NET4 1388 aa8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 IBTKQ9P2D0 1353 aaPredicted RBP8.43□□□□□ -1.06
TRAV1-2-201ENST00000390423 UBE2Q2LH0YL09 131 aa8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 KIF4BQ2VIQ3 1234 aa8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 AMER1Q5JTC6 1135 aaPredicted RBP8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 MCM10Q7L590 875 aa8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 SULF1Q8IWU6 871 aa8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 REM2Q8IYK8 340 aaPredicted RBP8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 SLC17A8Q8NDX2 589 aa8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 GAS2L2Q8NHY3 880 aa8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 DPF2Q92785 391 aa8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 MAP3K15Q6ZN16 1313 aa8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 COL4A1P02462 1669 aa8.42□□□□□ -1.06
TRAV1-2-201ENST00000390423 LRRC37AA6NMS7 1700 aa8.41□□□□□ -1.06
TRAV1-2-201ENST00000390423 ERVV-1B6SEH8 477 aa8.41□□□□□ -1.06
TRAV1-2-201ENST00000390423 H0YGN5 161 aa8.41□□□□□ -1.06
TRAV1-2-201ENST00000390423 U2SURPO15042 1029 aaKnown RBP8.41□□□□□ -1.06
TRAV1-2-201ENST00000390423 FKTNO75072 461 aa8.41□□□□□ -1.06
TRAV1-2-201ENST00000390423 ANGEL2Q5VTE6 544 aaKnown RBP8.41□□□□□ -1.06
TRAV1-2-201ENST00000390423 SP8Q8IXZ3 490 aa8.41□□□□□ -1.06
TRAV1-2-201ENST00000390423 ZNF34Q8IZ26 560 aa8.41□□□□□ -1.06
TRAV1-2-201ENST00000390423 TMX4Q9H1E5 349 aaPredicted RBP8.41□□□□□ -1.06
TRAV1-2-201ENST00000390423 SCN9AQ15858 1988 aa8.41□□□□□ -1.06
TRAV1-2-201ENST00000390423 KIAA0100Q14667 2235 aaKnown RBP8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 RIMBP2O15034 1052 aa8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 TM4SF4P48230 202 aa8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 DCTN1Q14203 1278 aa8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 DOK7Q18PE1 504 aa8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 NOM1Q5C9Z4 860 aaKnown RBP8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 PRAMEF18Q5VWM3 479 aa8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 OTOP1Q7RTM1 612 aa8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 OTUD5Q96G74 571 aa8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 NLRP3Q96P20 1036 aa8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 MIS18AQ9NYP9 233 aa8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 TRIM17Q9Y577 477 aa8.4□□□□□ -1.06
TRAV1-2-201ENST00000390423 COL6A3P12111 3177 aa8.4□□□□□ -1.07
TRAV1-2-201ENST00000390423 BBOX1O75936 387 aa8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 HCLS1P14317 486 aaPredicted RBP8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 MYL6BP14649 208 aa8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 CAP1Q01518 475 aa8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 KIF6Q6ZMV9 814 aa8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 ZNF428Q96B54 188 aa8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 RRP7AQ9Y3A4 280 aaKnown RBP8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 KNSTRNQ9Y448 316 aa8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 ANKRD36CQ5JPF3 1778 aa8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 KDM3BQ7LBC6 1761 aa8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 RANBP2P49792 3224 aaKnown RBP8.39□□□□□ -1.07
TRAV1-2-201ENST00000390423 ECE2O60344 883 aa8.38□□□□□ -1.07
TRAV1-2-201ENST00000390423 RPS12P25398 132 aaKnown RBP8.38□□□□□ -1.07
TRAV1-2-201ENST00000390423 PRKAR2BP31323 418 aa8.38□□□□□ -1.07
TRAV1-2-201ENST00000390423 FKBP1BP68106 108 aa8.38□□□□□ -1.07
TRAV1-2-201ENST00000390423 SCARF1Q14162 830 aa8.38□□□□□ -1.07
TRAV1-2-201ENST00000390423 SLC10A5Q5PT55 438 aa8.38□□□□□ -1.07
TRAV1-2-201ENST00000390423 INTS3Q68E01 1043 aaKnown RBP8.38□□□□□ -1.07
TRAV1-2-201ENST00000390423 CHRDL2Q6WN34 429 aa8.38□□□□□ -1.07
TRAV1-2-201ENST00000390423 CEP290O15078 2479 aa8.38□□□□□ -1.07
TRAV1-2-201ENST00000390423 A0A0C4DFX4 3053 aa8.38□□□□□ -1.07
TRAV1-2-201ENST00000390423 DDX60Q8IY21 1712 aaKnown RBP8.37□□□□□ -1.07
TRAV1-2-201ENST00000390423 GRAPQ13588 217 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms