RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 PODXL2Q9NZ53 605 aa12.75□□□□□ -0.37
LAMA4-205ENST00000389463 TNNI2P48788 182 aa12.74□□□□□ -0.37
LAMA4-205ENST00000389463 TSHZ3Q63HK5 1081 aa12.74□□□□□ -0.37
LAMA4-205ENST00000389463 SCAND2PQ9GZW5 306 aaPredicted RBP12.74□□□□□ -0.37
LAMA4-205ENST00000389463 TCP11L1Q9NUJ3 509 aa12.74□□□□□ -0.37
LAMA4-205ENST00000389463 APBA3O96018 575 aa12.74□□□□□ -0.37
LAMA4-205ENST00000389463 IFIT1BQ5T764 474 aaKnown RBP12.74□□□□□ -0.37
LAMA4-205ENST00000389463 TTC22Q5TAA0 569 aa12.74□□□□□ -0.37
LAMA4-205ENST00000389463 ZNF397Q8NF99 534 aaPredicted RBP12.74□□□□□ -0.37
LAMA4-205ENST00000389463 DDX17Q92841 729 aaKnown RBP12.74□□□□□ -0.37
LAMA4-205ENST00000389463 FGFR1OPO95684 399 aaKnown RBP12.74□□□□□ -0.37
LAMA4-205ENST00000389463 SLC9C2Q5TAH2 1124 aa12.74□□□□□ -0.37
LAMA4-205ENST00000389463 COL17A1Q9UMD9 1497 aaPredicted RBP12.74□□□□□ -0.37
LAMA4-205ENST00000389463 SOS1Q07889 1333 aaPredicted RBP12.74□□□□□ -0.37
LAMA4-205ENST00000389463 MAP3K11Q16584 847 aa12.74□□□□□ -0.37
LAMA4-205ENST00000389463 TMTC2Q8N394 836 aa12.74□□□□□ -0.37
LAMA4-205ENST00000389463 SLC26A6Q9BXS9 759 aa12.74□□□□□ -0.37
LAMA4-205ENST00000389463 GJA3Q9Y6H8 435 aa12.74□□□□□ -0.37
LAMA4-205ENST00000389463 FAM43AQ8N2R8 423 aa12.73□□□□□ -0.37
LAMA4-205ENST00000389463 LDHBP07195 334 aaKnown RBP12.73□□□□□ -0.37
LAMA4-205ENST00000389463 HELBQ8NG08 1087 aaPredicted RBP12.73□□□□□ -0.37
LAMA4-205ENST00000389463 SSR1P43307 286 aaKnown RBP12.73□□□□□ -0.37
LAMA4-205ENST00000389463 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
LAMA4-205ENST00000389463 CWF19L2Q2TBE0 894 aaKnown RBP12.73□□□□□ -0.37
LAMA4-205ENST00000389463 FKBP15Q5T1M5 1219 aa12.73□□□□□ -0.37
LAMA4-205ENST00000389463 ZNF790Q6PG37 636 aa12.73□□□□□ -0.37
LAMA4-205ENST00000389463 TRMT1LQ7Z2T5 733 aaKnown RBP12.73□□□□□ -0.37
LAMA4-205ENST00000389463 AMPD3Q01432 767 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 ORC3Q9UBD5 711 aaPredicted RBP12.72□□□□□ -0.37
LAMA4-205ENST00000389463 PIK3C2GO75747 1445 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 GNAT2P19087 354 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 GNAQP50148 359 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 MCMDC2Q4G0Z9 681 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
LAMA4-205ENST00000389463 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 VTI1AQ96AJ9 217 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 PAG1Q9NWQ8 432 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 B4DLN1 442 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 MRPL12P52815 198 aaKnown RBP12.72□□□□□ -0.37
LAMA4-205ENST00000389463 BMP2KLQ5H9B9 411 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 ARHGEF12Q9NZN5 1544 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
LAMA4-205ENST00000389463 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
LAMA4-205ENST00000389463 H0YIN7 160 aa12.71□□□□□ -0.37
LAMA4-205ENST00000389463 CCDC87Q9NVE4 849 aa12.71□□□□□ -0.37
LAMA4-205ENST00000389463 PA2G4Q9UQ80 394 aaKnown RBP12.71□□□□□ -0.37
LAMA4-205ENST00000389463 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.37
LAMA4-205ENST00000389463 RAB11FIP4Q86YS3 637 aa12.71□□□□□ -0.37
LAMA4-205ENST00000389463 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
LAMA4-205ENST00000389463 TESK2Q96S53 571 aa12.71□□□□□ -0.37
LAMA4-205ENST00000389463 UFL1O94874 794 aa12.71□□□□□ -0.38
LAMA4-205ENST00000389463 PLBD2Q8NHP8 589 aa12.71□□□□□ -0.38
LAMA4-205ENST00000389463 PLS1Q14651 629 aa12.71□□□□□ -0.38
LAMA4-205ENST00000389463 CAMK4Q16566 473 aa12.71□□□□□ -0.38
LAMA4-205ENST00000389463 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.38
LAMA4-205ENST00000389463 CCDC148Q8NFR7 591 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 CNNM3Q8NE01 707 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
LAMA4-205ENST00000389463 ZBTB43O43298 467 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 CETN2P41208 172 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 SKIDA1Q1XH10 827 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 CFAP100Q494V2 611 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 PYM1Q9BRP8 204 aaKnown RBP12.7□□□□□ -0.38
LAMA4-205ENST00000389463 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 CKAP2LQ8IYA6 745 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 MAGEB6Q8N7X4 407 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 MCM9Q9NXL9 1143 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 DENND2AQ9ULE3 1009 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 SH3TC1Q8TE82 1336 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 KIAA1328Q86T90 577 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 ERMNQ8TAM6 284 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
LAMA4-205ENST00000389463 EPB41L2O43491 1005 aaKnown RBP12.69□□□□□ -0.38
LAMA4-205ENST00000389463 NBPF7P0C2Y1 421 aaPredicted RBP12.69□□□□□ -0.38
LAMA4-205ENST00000389463 EIF6P56537 245 aaKnown RBP12.69□□□□□ -0.38
LAMA4-205ENST00000389463 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 GJB2P29033 226 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 UBA7P41226 1012 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
LAMA4-205ENST00000389463 ANO10Q9NW15 660 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 RTN1Q16799 776 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 JAKMIP3Q5VZ66 844 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 CACNA2D4Q7Z3S7 1137 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 CETN1Q12798 172 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 GGA1Q9UJY5 639 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 PARD3Q8TEW0 1356 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 NEFHP12036 1026 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 NUCB1Q02818 461 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 TFCP2Q12800 502 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 TAF4BQ92750 862 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 DRC1Q96MC2 740 aa12.69□□□□□ -0.38
LAMA4-205ENST00000389463 HEATR3Q7Z4Q2 680 aa12.68□□□□□ -0.38
LAMA4-205ENST00000389463 SYCP3Q8IZU3 236 aa12.68□□□□□ -0.38
LAMA4-205ENST00000389463 RNF113AO15541 343 aaKnown RBP12.68□□□□□ -0.38
LAMA4-205ENST00000389463 IDEP14735 1019 aa12.68□□□□□ -0.38
LAMA4-205ENST00000389463 LTKP29376 864 aa12.68□□□□□ -0.38
LAMA4-205ENST00000389463 VPS36Q86VN1 386 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms