RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 CCDC102BQ68D86 513 aa17.74■□□□□ 0.43
ALK-201ENST00000389048 USP48Q86UV5 1035 aa17.74■□□□□ 0.43
ALK-201ENST00000389048 CCDC25Q86WR0 208 aa17.74■□□□□ 0.43
ALK-201ENST00000389048 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 CCDC174Q6PII3 467 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 FAM114A1Q8IWE2 563 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 EHMT1Q9H9B1 1298 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 TBCAO75347 108 aaKnown RBP17.73■□□□□ 0.43
ALK-201ENST00000389048 SF3A3Q12874 501 aaKnown RBP eCLIP17.73■□□□□ 0.43
ALK-201ENST00000389048 TBC1D5Q92609 795 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 EVI5LQ96CN4 794 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 TRIM27P14373 513 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 PICALMQ13492 652 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 MRRFQ96E11 262 aaKnown RBP17.73■□□□□ 0.43
ALK-201ENST00000389048 CKAP4Q07065 602 aaKnown RBP17.73■□□□□ 0.43
ALK-201ENST00000389048 ZBTB21Q9ULJ3 1066 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 KIF21BO75037 1637 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 KLF18A0A0U1RQI7 1052 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 STX17P56962 302 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 STX8Q9UNK0 236 aa17.73■□□□□ 0.43
ALK-201ENST00000389048 RAB3IL1Q8TBN0 382 aa17.72■□□□□ 0.43
ALK-201ENST00000389048 RABEP2Q9H5N1 569 aa17.72■□□□□ 0.43
ALK-201ENST00000389048 TTC12Q9H892 705 aaPredicted RBP17.72■□□□□ 0.43
ALK-201ENST00000389048 GAPVD1Q14C86 1478 aa17.72■□□□□ 0.43
ALK-201ENST00000389048 RNF41Q9H4P4 317 aaPredicted RBP17.72■□□□□ 0.43
ALK-201ENST00000389048 LZTFL1Q9NQ48 299 aa17.72■□□□□ 0.43
ALK-201ENST00000389048 FBLN1P23142 703 aa17.72■□□□□ 0.43
ALK-201ENST00000389048 ZNF622Q969S3 477 aaKnown RBP eCLIP17.71■□□□□ 0.43
ALK-201ENST00000389048 DHX58Q96C10 678 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 CTAGE15A4D2H0 777 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 CTAGE8P0CG41 777 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 UBE2HP62256 183 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 TTF1Q15361 905 aaPredicted RBP17.71■□□□□ 0.43
ALK-201ENST00000389048 CTAGE6Q86UF2 777 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 CTAGE4Q8IX94 777 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 BRF1Q92994 677 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 PLEKHH1Q9ULM0 1364 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 CALM1P0DP23 149 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 CALM2P0DP24 149 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 CALM3P0DP25 149 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 DAAM2Q86T65 1068 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.43
ALK-201ENST00000389048 HGSO14964 777 aaPredicted RBP17.71■□□□□ 0.43
ALK-201ENST00000389048 GPIHBP1Q8IV16 184 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 ZBTB16Q05516 673 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 KRT222Q8N1A0 295 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 KCNK9Q9NPC2 374 aa17.71■□□□□ 0.43
ALK-201ENST00000389048 NEMFO60524 1076 aa17.7■□□□□ 0.42
ALK-201ENST00000389048 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.42
ALK-201ENST00000389048 NAP1L3Q99457 506 aaPredicted RBP17.7■□□□□ 0.42
ALK-201ENST00000389048 CLGNO14967 610 aa17.7■□□□□ 0.42
ALK-201ENST00000389048 LDHAL6AQ6ZMR3 332 aa17.7■□□□□ 0.42
ALK-201ENST00000389048 SPAG5Q96R06 1193 aa17.7■□□□□ 0.42
ALK-201ENST00000389048 TLDC2A0PJX2 215 aa17.7■□□□□ 0.42
ALK-201ENST00000389048 NAA25Q14CX7 972 aa17.7■□□□□ 0.42
ALK-201ENST00000389048 VTI1AQ96AJ9 217 aa17.7■□□□□ 0.42
ALK-201ENST00000389048 TMX3Q96JJ7 454 aa17.7■□□□□ 0.42
ALK-201ENST00000389048 SYT1P21579 422 aa17.7■□□□□ 0.42
ALK-201ENST00000389048 IRX3P78415 501 aaPredicted RBP17.7■□□□□ 0.42
ALK-201ENST00000389048 NCOA7Q8NI08 942 aa17.7■□□□□ 0.42
ALK-201ENST00000389048 TPD52P55327 224 aaPredicted RBP17.69■□□□□ 0.42
ALK-201ENST00000389048 ALG1Q9BT22 464 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 GUCA1BQ9UMX6 200 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 PAXBP1Q9Y5B6 917 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 ZWINTO95229 277 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 CAPN2P17655 700 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 PLCB3Q01970 1234 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 LRSAM1Q6UWE0 723 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 UBE3BQ7Z3V4 1068 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 NDC80O14777 642 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
ALK-201ENST00000389048 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 TSPY3P0CV98 308 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 TSPY8P0CW00 308 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 PPP1R42Q7Z4L9 355 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 DYNC1I1O14576 645 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 RXRAP19793 462 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 DNM1Q05193 864 aaKnown RBP17.69■□□□□ 0.42
ALK-201ENST00000389048 THEMISQ8N1K5 641 aaPredicted RBP17.69■□□□□ 0.42
ALK-201ENST00000389048 PPP1R9BQ96SB3 815 aa17.69■□□□□ 0.42
ALK-201ENST00000389048 ZSCAN22P10073 491 aaPredicted RBP17.68■□□□□ 0.42
ALK-201ENST00000389048 IRX5P78411 483 aaPredicted RBP17.68■□□□□ 0.42
ALK-201ENST00000389048 STAC3Q96MF2 364 aa17.68■□□□□ 0.42
ALK-201ENST00000389048 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
ALK-201ENST00000389048 ERCC5P28715 1186 aaPredicted RBP17.68■□□□□ 0.42
ALK-201ENST00000389048 LMOD1P29536 600 aaPredicted RBP17.68■□□□□ 0.42
ALK-201ENST00000389048 Q6ZUG5 572 aa17.68■□□□□ 0.42
ALK-201ENST00000389048 KIF5BP33176 963 aa17.68■□□□□ 0.42
ALK-201ENST00000389048 PDE4BQ07343 736 aa17.68■□□□□ 0.42
ALK-201ENST00000389048 PROCA1Q8NCQ7 364 aaPredicted RBP17.68■□□□□ 0.42
ALK-201ENST00000389048 ARFGAP3Q9NP61 516 aa17.68■□□□□ 0.42
ALK-201ENST00000389048 UAP1Q16222 522 aaPredicted RBP17.67■□□□□ 0.42
ALK-201ENST00000389048 IFIT1BQ5T764 474 aaKnown RBP17.67■□□□□ 0.42
ALK-201ENST00000389048 JAG2Q9Y219 1238 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 RNASE9P60153 205 aaKnown RBP17.67■□□□□ 0.42
ALK-201ENST00000389048 ASIC1P78348 528 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 SP4Q02446 784 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 TTC22Q5TAA0 569 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 C16orf71Q8IYS4 520 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms