RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 SETSIPP0DME0 302 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 JAKMIP3Q5VZ66 844 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 MYCBPQ99417 103 aaPredicted RBP6.59□□□□□ -1.35
RFC1-202ENST00000381897 GBP3Q9H0R5 595 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 LIMCH1Q9UPQ0 1083 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 H3BRB1 525 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 MAP3K7O43318 606 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 CCDC186Q7Z3E2 898 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 MAATS1Q7Z4T9 603 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 CHCHD4Q8N4Q1 142 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 SPATA32Q96LK8 384 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 FSD1Q9BTV5 496 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 TUT1Q9H6E5 874 aaKnown RBP6.59□□□□□ -1.35
RFC1-202ENST00000381897 CYP46A1Q9Y6A2 500 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 HIP1O00291 1037 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 ELL2O00472 640 aaPredicted RBP6.59□□□□□ -1.35
RFC1-202ENST00000381897 SNW1Q13573 536 aaKnown RBP6.59□□□□□ -1.35
RFC1-202ENST00000381897 ATP2B3Q16720 1220 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 CFAP70Q5T0N1 1121 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 PLEKHM2Q8IWE5 1019 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 TRERF1Q96PN7 1200 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 DCTPP1Q9H773 170 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 TOMM22Q9NS69 142 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 CD109Q6YHK3 1445 aa6.59□□□□□ -1.35
RFC1-202ENST00000381897 GNAI2P04899 355 aa6.59□□□□□ -1.36
RFC1-202ENST00000381897 SDSP20132 328 aa6.59□□□□□ -1.36
RFC1-202ENST00000381897 CCDC70Q6NSX1 233 aa6.59□□□□□ -1.36
RFC1-202ENST00000381897 KIAA1524Q8TCG1 905 aa6.59□□□□□ -1.36
RFC1-202ENST00000381897 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.59□□□□□ -1.361e-8■■■■■ 60
RFC1-202ENST00000381897 KLHL42Q9P2K6 505 aa6.59□□□□□ -1.36
RFC1-202ENST00000381897 CFAP45Q9UL16 551 aa6.59□□□□□ -1.36
RFC1-202ENST00000381897 TTC37Q6PGP7 1564 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 GOLGA6BA6NDN3 693 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 ZSCAN12O43309 604 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 NFE2L2Q16236 605 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 ANKRD7Q92527 254 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 AFG3L2Q9Y4W6 797 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 MAST1Q9Y2H9 1570 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 ATP10BO94823 1461 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 GOLGA6CA6NDK9 693 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 GOLGA6L9A6NEM1 432 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 F13A1P00488 732 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 GOLGA6DP0CG33 693 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 PTGS1P23219 599 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 SART3Q15020 963 aaKnown RBP6.58□□□□□ -1.36
RFC1-202ENST00000381897 ANKLE2Q86XL3 938 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 ZNF396Q96N95 335 aaPredicted RBP6.58□□□□□ -1.36
RFC1-202ENST00000381897 SLC26A8Q96RN1 970 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 CFAP74Q9C0B2 1584 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 ANO10Q9NW15 660 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 SSH2Q76I76 1423 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 TRAPPC8Q9Y2L5 1435 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 A0A1B0GUL7 405 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 VGLL3A8MV65 326 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 GTPBP6O43824 516 aaPredicted RBP6.58□□□□□ -1.36
RFC1-202ENST00000381897 UBE4AQ14139 1066 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 TAF12Q16514 161 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 STX1AQ16623 288 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 LARP1BQ659C4 914 aaKnown RBP6.58□□□□□ -1.36
RFC1-202ENST00000381897 CCAR2Q8N163 923 aaKnown RBP6.58□□□□□ -1.36
RFC1-202ENST00000381897 MRGBPQ9NV56 204 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 DDX41Q9UJV9 622 aaKnown RBP6.58□□□□□ -1.36
RFC1-202ENST00000381897 SFPQP23246 707 aaKnown RBP eCLIP6.58□□□□□ -1.36
RFC1-202ENST00000381897 GBP2P32456 591 aaPredicted RBP6.58□□□□□ -1.36
RFC1-202ENST00000381897 TERF2Q15554 542 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 GIMAP6Q6P9H5 292 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 ANKRD44Q8N8A2 993 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
RFC1-202ENST00000381897 POM121Q96HA1 1249 aa6.58□□□□□ -1.36
RFC1-202ENST00000381897 PTPRCP08575 1304 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 SMC2O95347 1197 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 PRKAR2BP31323 418 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 TUBB4BP68371 445 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 SLC12A5Q9H2X9 1139 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 PDRG1Q9NUG6 133 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 SWAP70Q9UH65 585 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 CNPY2Q9Y2B0 182 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 MORC2Q9Y6X9 1032 aaPredicted RBP6.57□□□□□ -1.36
RFC1-202ENST00000381897 ELP1O95163 1332 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 FAM177BA6PVY3 158 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 ZBTB7BO15156 539 aaPredicted RBP6.57□□□□□ -1.36
RFC1-202ENST00000381897 CYP2E1P05181 493 aaPredicted RBP6.57□□□□□ -1.36
RFC1-202ENST00000381897 GTF2E1P29083 439 aaPredicted RBP6.57□□□□□ -1.36
RFC1-202ENST00000381897 CTHP32929 405 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 SLFNL1Q499Z3 407 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 EP400NLQ6ZTU2 488 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 MICALL1Q8N3F8 863 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 MRPL50Q8N5N7 158 aaKnown RBP6.57□□□□□ -1.36
RFC1-202ENST00000381897 YEATS2Q9ULM3 1422 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 RPGRIP1LQ68CZ1 1315 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 ATP8B1O43520 1251 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 PAX3P23760 479 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 ZNF165P49910 485 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 TYRO3Q06418 890 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 TTC31Q49AM3 519 aaPredicted RBP6.57□□□□□ -1.36
RFC1-202ENST00000381897 CCDC92Q53HC0 331 aaPredicted RBP6.57□□□□□ -1.36
RFC1-202ENST00000381897 TNIP3Q96KP6 325 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 ESYT1Q9BSJ8 1104 aa6.57□□□□□ -1.36
RFC1-202ENST00000381897 HOOK1Q9UJC3 728 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms