RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 TTLL7Q6ZT98 887 aa23.98■■□□□ 1.43
EBF1-202ENST00000380654 DNAJC2Q99543 621 aaKnown RBP23.98■■□□□ 1.43
EBF1-202ENST00000380654 CHMP3Q9Y3E7 222 aa23.98■■□□□ 1.43
EBF1-202ENST00000380654 TAF5LO75529 589 aa23.97■■□□□ 1.43
EBF1-202ENST00000380654 DNM1Q05193 864 aaKnown RBP23.97■■□□□ 1.43
EBF1-202ENST00000380654 VPS37CA5D8V6 355 aaPredicted RBP23.96■■□□□ 1.43
EBF1-202ENST00000380654 SEC62Q99442 399 aaKnown RBP23.96■■□□□ 1.43
EBF1-202ENST00000380654 PSMA5P28066 241 aa23.96■■□□□ 1.43
EBF1-202ENST00000380654 BLOC1S2Q6QNY1 142 aa23.96■■□□□ 1.43
EBF1-202ENST00000380654 CCDC129Q6ZRS4 1044 aa23.96■■□□□ 1.43
EBF1-202ENST00000380654 RNF20Q5VTR2 975 aa23.95■■□□□ 1.43
EBF1-202ENST00000380654 JCADQ9P266 1359 aa23.95■■□□□ 1.42
EBF1-202ENST00000380654 A1BGP04217 495 aa23.95■■□□□ 1.42
EBF1-202ENST00000380654 FOXO4P98177 505 aa23.95■■□□□ 1.42
EBF1-202ENST00000380654 TOM1L2Q6ZVM7 507 aa23.95■■□□□ 1.42
EBF1-202ENST00000380654 PARP4Q9UKK3 1724 aaKnown RBP23.94■■□□□ 1.42
EBF1-202ENST00000380654 RPS6KB1P23443 525 aa23.94■■□□□ 1.42
EBF1-202ENST00000380654 BRINP3Q76B58 766 aa23.94■■□□□ 1.42
EBF1-202ENST00000380654 PRDM11Q9NQV5 511 aa23.94■■□□□ 1.42
EBF1-202ENST00000380654 ZNF609O15014 1411 aa23.94■■□□□ 1.42
EBF1-202ENST00000380654 TOB2Q14106 344 aaPredicted RBP23.94■■□□□ 1.42
EBF1-202ENST00000380654 DDX46Q7L014 1031 aaKnown RBP23.94■■□□□ 1.42
EBF1-202ENST00000380654 ZCRB1Q8TBF4 217 aaKnown RBP23.94■■□□□ 1.42
EBF1-202ENST00000380654 UBE2HP62256 183 aa23.93■■□□□ 1.42
EBF1-202ENST00000380654 ATP6V1DQ9Y5K8 247 aa23.93■■□□□ 1.42
EBF1-202ENST00000380654 PLEKHG2Q9H7P9 1386 aa23.93■■□□□ 1.42
EBF1-202ENST00000380654 PHF14O94880 888 aa23.92■■□□□ 1.42
EBF1-202ENST00000380654 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.92■■□□□ 1.42
EBF1-202ENST00000380654 WDR17Q8IZU2 1322 aa23.92■■□□□ 1.42
EBF1-202ENST00000380654 XIRP1Q702N8 1843 aaKnown RBP23.92■■□□□ 1.42
EBF1-202ENST00000380654 H7C1W4 665 aa23.92■■□□□ 1.42
EBF1-202ENST00000380654 MSNP26038 577 aaKnown RBP23.92■■□□□ 1.42
EBF1-202ENST00000380654 STK3Q13188 491 aa23.92■■□□□ 1.42
EBF1-202ENST00000380654 SLFNL1Q499Z3 407 aa23.92■■□□□ 1.42
EBF1-202ENST00000380654 CCDC183Q5T5S1 534 aa23.92■■□□□ 1.42
EBF1-202ENST00000380654 ZBTB3Q9H5J0 574 aa23.92■■□□□ 1.42
EBF1-202ENST00000380654 PCDH11XQ9BZA7 1347 aa23.92■■□□□ 1.42
EBF1-202ENST00000380654 PCDH11YQ9BZA8 1340 aa23.92■■□□□ 1.42
EBF1-202ENST00000380654 LARP1BQ659C4 914 aaKnown RBP23.91■■□□□ 1.42
EBF1-202ENST00000380654 FERMT3Q86UX7 667 aa23.91■■□□□ 1.42
EBF1-202ENST00000380654 HAUS7Q99871 368 aa23.91■■□□□ 1.42
EBF1-202ENST00000380654 USPL1Q5W0Q7 1092 aa23.9■■□□□ 1.42
EBF1-202ENST00000380654 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
EBF1-202ENST00000380654 ATG9AQ7Z3C6 839 aa23.9■■□□□ 1.42
EBF1-202ENST00000380654 NUP188Q5SRE5 1749 aa23.9■■□□□ 1.42
EBF1-202ENST00000380654 HS1BP3Q53T59 392 aa23.89■■□□□ 1.42
EBF1-202ENST00000380654 FAM173BQ6P4H8 233 aa23.89■■□□□ 1.42
EBF1-202ENST00000380654 NEUROD6Q96NK8 337 aa23.89■■□□□ 1.42
EBF1-202ENST00000380654 CWC25Q9NXE8 425 aaPredicted RBP23.89■■□□□ 1.42
EBF1-202ENST00000380654 HMG20BQ9P0W2 317 aa23.89■■□□□ 1.42
EBF1-202ENST00000380654 UBR2Q8IWV8 1755 aa23.89■■□□□ 1.42
EBF1-202ENST00000380654 TJP1Q07157 1748 aa23.89■■□□□ 1.41
EBF1-202ENST00000380654 TIMM10P62072 90 aa23.89■■□□□ 1.41
EBF1-202ENST00000380654 TSGA10IPQ3SY00 556 aa23.89■■□□□ 1.41
EBF1-202ENST00000380654 ZNF594Q96JF6 807 aaPredicted RBP23.89■■□□□ 1.41
EBF1-202ENST00000380654 KCPQ6ZWJ8 1503 aa23.88■■□□□ 1.41
EBF1-202ENST00000380654 NOL7Q9UMY1 257 aaKnown RBP23.88■■□□□ 1.41
EBF1-202ENST00000380654 ANKRD1Q15327 319 aa23.88■■□□□ 1.41
EBF1-202ENST00000380654 COL5A2P05997 1499 aaPredicted RBP23.87■■□□□ 1.41
EBF1-202ENST00000380654 LRRC24Q50LG9 513 aa23.87■■□□□ 1.41
EBF1-202ENST00000380654 ERVV-2B6SEH9 535 aa23.86■■□□□ 1.41
EBF1-202ENST00000380654 CYP21A2P08686 494 aa23.86■■□□□ 1.41
EBF1-202ENST00000380654 MCMDC2Q4G0Z9 681 aa23.86■■□□□ 1.41
EBF1-202ENST00000380654 ALDH8A1Q9H2A2 487 aaPredicted RBP23.86■■□□□ 1.41
EBF1-202ENST00000380654 GOLIM4O00461 696 aa23.85■■□□□ 1.41
EBF1-202ENST00000380654 NEK1Q96PY6 1258 aa23.85■■□□□ 1.41
EBF1-202ENST00000380654 HCLS1P14317 486 aaPredicted RBP23.85■■□□□ 1.41
EBF1-202ENST00000380654 GIMAP6Q6P9H5 292 aa23.85■■□□□ 1.41
EBF1-202ENST00000380654 KBTBD3Q8NAB2 608 aa23.85■■□□□ 1.41
EBF1-202ENST00000380654 STRN4Q9NRL3 753 aa23.85■■□□□ 1.41
EBF1-202ENST00000380654 LRRC2Q9BYS8 371 aa23.84■■□□□ 1.41
EBF1-202ENST00000380654 RFX7Q2KHR2 1363 aa23.83■■□□□ 1.41
EBF1-202ENST00000380654 IL2RBP14784 551 aa23.83■■□□□ 1.41
EBF1-202ENST00000380654 TTC6Q86TZ1 520 aa23.83■■□□□ 1.41
EBF1-202ENST00000380654 SHANK3Q9BYB0 1731 aa23.83■■□□□ 1.41
EBF1-202ENST00000380654 JAK2O60674 1132 aa23.83■■□□□ 1.4
EBF1-202ENST00000380654 Q6ZUG5 572 aa23.83■■□□□ 1.4
EBF1-202ENST00000380654 PUS3Q9BZE2 481 aaKnown RBP23.83■■□□□ 1.4
EBF1-202ENST00000380654 PAG1Q9NWQ8 432 aa23.83■■□□□ 1.4
EBF1-202ENST00000380654 ZNF330Q9Y3S2 320 aaPredicted RBP23.83■■□□□ 1.4
EBF1-202ENST00000380654 U3KPZ7 1027 aaPredicted RBP23.83■■□□□ 1.4
EBF1-202ENST00000380654 PAPPAQ13219 1627 aa23.82■■□□□ 1.4
EBF1-202ENST00000380654 KRT32Q14532 448 aa23.82■■□□□ 1.4
EBF1-202ENST00000380654 CSPP1Q1MSJ5 1256 aa23.82■■□□□ 1.4
EBF1-202ENST00000380654 STOX1Q6ZVD7 989 aa23.82■■□□□ 1.4
EBF1-202ENST00000380654 ZKSCAN5Q9Y2L8 839 aa23.82■■□□□ 1.4
EBF1-202ENST00000380654 NKX1-1Q15270 411 aaPredicted RBP23.82■■□□□ 1.4
EBF1-202ENST00000380654 CCDC191Q8NCU4 936 aa23.82■■□□□ 1.4
EBF1-202ENST00000380654 USP25Q9UHP3 1055 aa23.81■■□□□ 1.4
EBF1-202ENST00000380654 A0A0G2JLW4 131 aa23.81■■□□□ 1.4
EBF1-202ENST00000380654 PDCP20941 246 aa23.81■■□□□ 1.4
EBF1-202ENST00000380654 IL15P40933 162 aaPredicted RBP23.81■■□□□ 1.4
EBF1-202ENST00000380654 MPNDQ8N594 471 aa23.81■■□□□ 1.4
EBF1-202ENST00000380654 CCDC39Q9UFE4 941 aa23.81■■□□□ 1.4
EBF1-202ENST00000380654 LAMA4Q16363 1823 aa23.8■■□□□ 1.4
EBF1-202ENST00000380654 EYA2O00167 538 aa23.8■■□□□ 1.4
EBF1-202ENST00000380654 LETM1O95202 739 aaPredicted RBP23.8■■□□□ 1.4
EBF1-202ENST00000380654 KRT85P78386 507 aa23.8■■□□□ 1.4
EBF1-202ENST00000380654 GTF3C6Q969F1 213 aa23.8■■□□□ 1.4
EBF1-202ENST00000380654 SH3TC1Q8TE82 1336 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms