RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 PGBD1Q96JS3 809 aa10.35□□□□□ -0.75
TRIM6-203ENST00000380107 PRIMPOLQ96LW4 560 aa10.35□□□□□ -0.75
TRIM6-203ENST00000380107 DNAJC2Q99543 621 aaKnown RBP10.35□□□□□ -0.75
TRIM6-203ENST00000380107 DNAJC25Q9H1X3 360 aa10.35□□□□□ -0.75
TRIM6-203ENST00000380107 HOXB7P09629 217 aa10.35□□□□□ -0.75
TRIM6-203ENST00000380107 ATP2B3Q16720 1220 aa10.35□□□□□ -0.75
TRIM6-203ENST00000380107 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
TRIM6-203ENST00000380107 ERC1Q8IUD2 1116 aa10.35□□□□□ -0.75
TRIM6-203ENST00000380107 LEO1Q8WVC0 666 aaPredicted RBP10.35□□□□□ -0.75
TRIM6-203ENST00000380107 ERCC4Q92889 916 aaPredicted RBP10.35□□□□□ -0.75
TRIM6-203ENST00000380107 C16orf45Q96MC5 204 aaPredicted RBP10.35□□□□□ -0.75
TRIM6-203ENST00000380107 TRIM5Q9C035 493 aa10.35□□□□□ -0.75
TRIM6-203ENST00000380107 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
TRIM6-203ENST00000380107 ALDH1L1O75891 902 aa10.34□□□□□ -0.75
TRIM6-203ENST00000380107 HSP90B1P14625 803 aaKnown RBP10.34□□□□□ -0.75
TRIM6-203ENST00000380107 HMGN5P82970 282 aaKnown RBP10.34□□□□□ -0.75
TRIM6-203ENST00000380107 LINS1Q8NG48 757 aa10.34□□□□□ -0.75
TRIM6-203ENST00000380107 MYD88Q99836 296 aa10.34□□□□□ -0.75
TRIM6-203ENST00000380107 CCDC94Q9BW85 323 aaPredicted RBP10.34□□□□□ -0.75
TRIM6-203ENST00000380107 ZHX1Q9UKY1 873 aaPredicted RBP10.34□□□□□ -0.75
TRIM6-203ENST00000380107 PSMA5P28066 241 aa10.34□□□□□ -0.75
TRIM6-203ENST00000380107 NAA30Q147X3 362 aaPredicted RBP10.34□□□□□ -0.75
TRIM6-203ENST00000380107 BRF1Q92994 677 aa10.34□□□□□ -0.75
TRIM6-203ENST00000380107 PRDM4Q9UKN5 801 aa10.34□□□□□ -0.75
TRIM6-203ENST00000380107 A0A0G2JLW4 131 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 TAF5LO75529 589 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 ARID5BQ14865 1188 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 PDIA6Q15084 440 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 DDX46Q7L014 1031 aaKnown RBP10.33□□□□□ -0.76
TRIM6-203ENST00000380107 THEMISQ8N1K5 641 aaPredicted RBP10.33□□□□□ -0.76
TRIM6-203ENST00000380107 ORAI2Q96SN7 254 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 NAP1L2Q9ULW6 460 aaPredicted RBP10.33□□□□□ -0.76
TRIM6-203ENST00000380107 MED1Q15648 1581 aaPredicted RBP10.33□□□□□ -0.76
TRIM6-203ENST00000380107 ATP5J2-PTCD1G3V325 749 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 PTCD1O75127 700 aaKnown RBP10.33□□□□□ -0.76
TRIM6-203ENST00000380107 TFCP2Q12800 502 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 RNF20Q5VTR2 975 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 Q6ZUG5 572 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 ANKRD24Q8TF21 1146 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 XAGE3Q8WTP9 111 aa10.33□□□□□ -0.76
TRIM6-203ENST00000380107 DBNLQ9UJU6 430 aaKnown RBP10.33□□□□□ -0.76
TRIM6-203ENST00000380107 IGSF3O75054 1194 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 GUCY1B3Q02153 619 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 COPS6Q7L5N1 327 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 CHST3Q7LGC8 479 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 H3BQV1 296 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 GCP02774 474 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 PDCP20941 246 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 U2AF2P26368 475 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRIM6-203ENST00000380107 GTF2F1P35269 517 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRIM6-203ENST00000380107 ZNF165P49910 485 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 CCT2P78371 535 aaKnown RBP10.32□□□□□ -0.76
TRIM6-203ENST00000380107 FGD1P98174 961 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 CCDC144BQ3MJ40 725 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 IFFO2Q5TF58 517 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 MTERF4Q7Z6M4 381 aaKnown RBP10.32□□□□□ -0.76
TRIM6-203ENST00000380107 CCDC144CPQ8IYA2 1237 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 TAOK2Q9UL54 1235 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 USP16Q9Y5T5 823 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 MED23Q9ULK4 1368 aa10.32□□□□□ -0.76
TRIM6-203ENST00000380107 NEURL1BA8MQ27 555 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 GOLGA6L6A8MZA4 724 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 ZC3H6P61129 1189 aaKnown RBP10.31□□□□□ -0.76
TRIM6-203ENST00000380107 UBE3BQ7Z3V4 1068 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 DBNDD2Q9BQY9 259 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 DDX21Q9NR30 783 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRIM6-203ENST00000380107 ANKARQ7Z5J8 1434 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 CYP21A2P08686 494 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 ZNF75DP51815 510 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 CHAF1AQ13111 956 aaPredicted RBP10.31□□□□□ -0.76
TRIM6-203ENST00000380107 C11orf57Q6ZUT1 292 aaPredicted RBP10.31□□□□□ -0.76
TRIM6-203ENST00000380107 NFATC2IPQ8NCF5 419 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 ZNF592Q92610 1267 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 NEK1Q96PY6 1258 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 SCAND2PQ9GZW5 306 aaPredicted RBP10.31□□□□□ -0.76
TRIM6-203ENST00000380107 CLSTN2Q9H4D0 955 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 NCOA5Q9HCD5 579 aaKnown RBP10.31□□□□□ -0.76
TRIM6-203ENST00000380107 NFAT5O94916 1531 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 ELP1O95163 1332 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 NPHP3Q7Z494 1330 aa10.31□□□□□ -0.76
TRIM6-203ENST00000380107 HIP1O00291 1037 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 DDX58O95786 925 aaKnown RBP10.3□□□□□ -0.76
TRIM6-203ENST00000380107 SCRN1Q12765 414 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 GCKRQ14397 625 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 ZSCAN25Q6NSZ9 544 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 STOX1Q6ZVD7 989 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 PDCL2Q8N4E4 241 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 CACTINQ8WUQ7 758 aaKnown RBP10.3□□□□□ -0.76
TRIM6-203ENST00000380107 GTF3C6Q969F1 213 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 APOBRQ0VD83 1088 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 RESTQ13127 1097 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 ANKRD1Q15327 319 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 CLIP2Q9UDT6 1046 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 ARHGAP23Q9P227 1491 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 ZNF609O15014 1411 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 SLIT1O75093 1534 aa10.3□□□□□ -0.76
TRIM6-203ENST00000380107 USP27XA6NNY8 438 aa10.29□□□□□ -0.76
TRIM6-203ENST00000380107 AMOTQ4VCS5 1084 aa10.29□□□□□ -0.76
TRIM6-203ENST00000380107 TNNI3KQ59H18 835 aa10.29□□□□□ -0.76
TRIM6-203ENST00000380107 FPGT-TNNI3KV9GXZ4 949 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms