RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 FAM89AQ96GI7 184 aa30.08■■■□□ 2.41
NDEL1-202ENST00000380025 ARXQ96QS3 562 aa30.08■■■□□ 2.41
NDEL1-202ENST00000380025 DNAJC2Q99543 621 aaKnown RBP30.07■■■□□ 2.4
NDEL1-202ENST00000380025 TM6SF1Q9BZW5 370 aa30.07■■■□□ 2.4
NDEL1-202ENST00000380025 CREB3L3Q68CJ9 461 aa30.07■■■□□ 2.4
NDEL1-202ENST00000380025 ZNF589Q86UQ0 364 aaPredicted RBP30.07■■■□□ 2.4
NDEL1-202ENST00000380025 PUS3Q9BZE2 481 aaKnown RBP30.07■■■□□ 2.4
NDEL1-202ENST00000380025 CPA1P15085 419 aa30.06■■■□□ 2.4
NDEL1-202ENST00000380025 NEUROD6Q96NK8 337 aa30.06■■■□□ 2.4
NDEL1-202ENST00000380025 DDB1Q16531 1140 aa30.05■■■□□ 2.4
NDEL1-202ENST00000380025 JAKMIP1Q96N16 626 aaKnown RBP30.05■■■□□ 2.4
NDEL1-202ENST00000380025 TIMM10P62072 90 aa30.05■■■□□ 2.4
NDEL1-202ENST00000380025 RUFY3Q7L099 469 aa30.05■■■□□ 2.4
NDEL1-202ENST00000380025 ZSWIM6Q9HCJ5 1215 aa30.05■■■□□ 2.4
NDEL1-202ENST00000380025 NUP98P52948 1817 aa30.04■■■□□ 2.4
NDEL1-202ENST00000380025 CCDC57Q2TAC2 916 aa30.04■■■□□ 2.4
NDEL1-202ENST00000380025 NLRP10Q86W26 655 aa30.04■■■□□ 2.4
NDEL1-202ENST00000380025 ZKSCAN1P17029 563 aaPredicted RBP30.04■■■□□ 2.4
NDEL1-202ENST00000380025 KCNJ4P48050 445 aa30.04■■■□□ 2.4
NDEL1-202ENST00000380025 NWD2Q9ULI1 1742 aa30.04■■■□□ 2.4
NDEL1-202ENST00000380025 CDHR2Q9BYE9 1310 aa30.03■■■□□ 2.4
NDEL1-202ENST00000380025 CSF1RP07333 972 aa30.03■■■□□ 2.4
NDEL1-202ENST00000380025 HSP90AB3PQ58FF7 597 aa30.03■■■□□ 2.4
NDEL1-202ENST00000380025 MCTP1Q6DN14 999 aa30.03■■■□□ 2.4
NDEL1-202ENST00000380025 LIMCH1Q9UPQ0 1083 aa30.03■■■□□ 2.4
NDEL1-202ENST00000380025 CCDC9Q9Y3X0 531 aaKnown RBP30.03■■■□□ 2.4
NDEL1-202ENST00000380025 FSD2A1L4K1 749 aa30.03■■■□□ 2.4
NDEL1-202ENST00000380025 SLC27A2O14975 620 aa30.03■■■□□ 2.4
NDEL1-202ENST00000380025 GPTP24298 496 aa30.03■■■□□ 2.4
NDEL1-202ENST00000380025 SPATA31A5Q5VU36 1347 aa30.02■■■□□ 2.4
NDEL1-202ENST00000380025 SPATA31A7Q8IWB4 1347 aa30.02■■■□□ 2.4
NDEL1-202ENST00000380025 BRD1O95696 1058 aa30.02■■■□□ 2.4
NDEL1-202ENST00000380025 VPS53Q5VIR6 699 aa30.02■■■□□ 2.4
NDEL1-202ENST00000380025 DDX46Q7L014 1031 aaKnown RBP30.02■■■□□ 2.4
NDEL1-202ENST00000380025 RPAP1Q9BWH6 1393 aaPredicted RBP30.02■■■□□ 2.4
NDEL1-202ENST00000380025 NUTM2BA6NNL0 878 aaPredicted RBP30.01■■■□□ 2.4
NDEL1-202ENST00000380025 NUTM2EB1AL46 878 aaPredicted RBP30.01■■■□□ 2.4
NDEL1-202ENST00000380025 TAF5LO75529 589 aa30.01■■■□□ 2.4
NDEL1-202ENST00000380025 NUTM2AQ8IVF1 878 aaPredicted RBP30.01■■■□□ 2.4
NDEL1-202ENST00000380025 SYNE4Q8N205 404 aa30.01■■■□□ 2.4
NDEL1-202ENST00000380025 FBXO3Q9UK99 471 aa30.01■■■□□ 2.4
NDEL1-202ENST00000380025 A0A1B0GUL7 405 aa30.01■■■□□ 2.39
NDEL1-202ENST00000380025 IL6STP40189 918 aaPredicted RBP30.01■■■□□ 2.39
NDEL1-202ENST00000380025 KBTBD3Q8NAB2 608 aa30.01■■■□□ 2.39
NDEL1-202ENST00000380025 CYP46A1Q9Y6A2 500 aa30.01■■■□□ 2.39
NDEL1-202ENST00000380025 CHGBP05060 677 aa30■■■□□ 2.39
NDEL1-202ENST00000380025 PDRG1Q9NUG6 133 aa30■■■□□ 2.39
NDEL1-202ENST00000380025 PALLDQ8WX93 1383 aa30■■■□□ 2.39
NDEL1-202ENST00000380025 MARCH10Q8NA82 808 aaPredicted RBP30■■■□□ 2.39
NDEL1-202ENST00000380025 CCDC85AQ96PX6 553 aaPredicted RBP30■■■□□ 2.39
NDEL1-202ENST00000380025 LARP6Q9BRS8 491 aaKnown RBP30■■■□□ 2.39
NDEL1-202ENST00000380025 SLIT2O94813 1529 aa29.99■■■□□ 2.39
NDEL1-202ENST00000380025 L1TD1Q5T7N2 865 aaKnown RBP29.99■■■□□ 2.39
NDEL1-202ENST00000380025 CEP126Q9P2H0 1117 aa29.99■■■□□ 2.39
NDEL1-202ENST00000380025 MYH3P11055 1940 aa29.99■■■□□ 2.39
NDEL1-202ENST00000380025 GOLGA6L3A6NEY3 463 aa29.98■■■□□ 2.39
NDEL1-202ENST00000380025 ERVV-1B6SEH8 477 aa29.98■■■□□ 2.39
NDEL1-202ENST00000380025 LMBRD1Q9NUN5 540 aa29.98■■■□□ 2.39
NDEL1-202ENST00000380025 PAG1Q9NWQ8 432 aa29.98■■■□□ 2.39
NDEL1-202ENST00000380025 RNF20Q5VTR2 975 aa29.97■■■□□ 2.39
NDEL1-202ENST00000380025 DZIP3Q86Y13 1208 aaKnown RBP29.97■■■□□ 2.39
NDEL1-202ENST00000380025 IFIT5Q13325 482 aaKnown RBP29.97■■■□□ 2.39
NDEL1-202ENST00000380025 KLHL40Q2TBA0 621 aa29.97■■■□□ 2.39
NDEL1-202ENST00000380025 USPL1Q5W0Q7 1092 aa29.97■■■□□ 2.39
NDEL1-202ENST00000380025 ACSBG1Q96GR2 724 aa29.97■■■□□ 2.39
NDEL1-202ENST00000380025 SPEF2Q9C093 1822 aa29.97■■■□□ 2.39
NDEL1-202ENST00000380025 GOLIM4O00461 696 aa29.96■■■□□ 2.39
NDEL1-202ENST00000380025 PIP4K2BP78356 416 aa29.96■■■□□ 2.39
NDEL1-202ENST00000380025 FOXD4L5Q5VV16 416 aaPredicted RBP29.96■■■□□ 2.39
NDEL1-202ENST00000380025 FOXD4L4Q8WXT5 416 aaPredicted RBP29.96■■■□□ 2.39
NDEL1-202ENST00000380025 SEC62Q99442 399 aaKnown RBP29.96■■■□□ 2.39
NDEL1-202ENST00000380025 BRPF3Q9ULD4 1205 aa29.96■■■□□ 2.39
NDEL1-202ENST00000380025 TBC1D2BQ9UPU7 963 aa29.96■■■□□ 2.39
NDEL1-202ENST00000380025 LARGE1O95461 756 aa29.96■■■□□ 2.39
NDEL1-202ENST00000380025 TAF6LQ9Y6J9 622 aa29.96■■■□□ 2.39
NDEL1-202ENST00000380025 MCMDC2Q4G0Z9 681 aa29.95■■■□□ 2.38
NDEL1-202ENST00000380025 BARGINQ6ZT62 677 aa29.95■■■□□ 2.38
NDEL1-202ENST00000380025 TTLL11Q8NHH1 800 aa29.95■■■□□ 2.38
NDEL1-202ENST00000380025 HMG20BQ9P0W2 317 aa29.95■■■□□ 2.38
NDEL1-202ENST00000380025 SH3TC1Q8TE82 1336 aa29.95■■■□□ 2.38
NDEL1-202ENST00000380025 PSMA5P28066 241 aa29.94■■■□□ 2.38
NDEL1-202ENST00000380025 CCDC129Q6ZRS4 1044 aa29.94■■■□□ 2.38
NDEL1-202ENST00000380025 CHAMP1Q96JM3 812 aa29.94■■■□□ 2.38
NDEL1-202ENST00000380025 DDX49Q9Y6V7 483 aaKnown RBP29.94■■■□□ 2.38
NDEL1-202ENST00000380025 RREB1Q92766 1687 aa29.94■■■□□ 2.38
NDEL1-202ENST00000380025 CICQ96RK0 1608 aaPredicted RBP29.94■■■□□ 2.38
NDEL1-202ENST00000380025 COL9A3Q14050 684 aaPredicted RBP29.94■■■□□ 2.38
NDEL1-202ENST00000380025 TSGA10IPQ3SY00 556 aa29.94■■■□□ 2.38
NDEL1-202ENST00000380025 TAF7LQ5H9L4 462 aa29.94■■■□□ 2.38
NDEL1-202ENST00000380025 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.94■■■□□ 2.38
NDEL1-202ENST00000380025 RIC1Q4ADV7 1423 aa29.93■■■□□ 2.38
NDEL1-202ENST00000380025 IFIT1P09914 478 aaKnown RBP29.93■■■□□ 2.38
NDEL1-202ENST00000380025 CTSWP56202 376 aa29.93■■■□□ 2.38
NDEL1-202ENST00000380025 INTS5Q6P9B9 1019 aaKnown RBP29.93■■■□□ 2.38
NDEL1-202ENST00000380025 AKAP2Q9Y2D5 859 aa29.93■■■□□ 2.38
NDEL1-202ENST00000380025 UBN2Q6ZU65 1347 aa29.93■■■□□ 2.38
NDEL1-202ENST00000380025 A0A0G2JS52 829 aa29.93■■■□□ 2.38
NDEL1-202ENST00000380025 TOM1O60784 492 aa29.93■■■□□ 2.38
NDEL1-202ENST00000380025 EIF5P55010 431 aaKnown RBP29.93■■■□□ 2.38
NDEL1-202ENST00000380025 TICAM2Q86XR7 235 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms