RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 LSG1Q9H089 658 aaKnown RBP8.42□□□□□ -1.06
DDX58-202ENST00000379883 ARHGEF40Q8TER5 1519 aa8.42□□□□□ -1.06
DDX58-202ENST00000379883 PLEKHG2Q9H7P9 1386 aa8.42□□□□□ -1.06
DDX58-202ENST00000379883 HSP90B1P14625 803 aaKnown RBP8.41□□□□□ -1.06
DDX58-202ENST00000379883 MCM3P25205 808 aa8.41□□□□□ -1.06
DDX58-202ENST00000379883 MAP2K2P36507 400 aa8.41□□□□□ -1.06
DDX58-202ENST00000379883 KRT32Q14532 448 aa8.41□□□□□ -1.06
DDX58-202ENST00000379883 SF3A1Q15459 793 aaKnown RBP8.41□□□□□ -1.06
DDX58-202ENST00000379883 DNAJC21Q5F1R6 531 aaKnown RBP8.41□□□□□ -1.06
DDX58-202ENST00000379883 CEP112Q8N8E3 955 aa8.41□□□□□ -1.06
DDX58-202ENST00000379883 TACO1Q9BSH4 297 aaKnown RBP8.41□□□□□ -1.06
DDX58-202ENST00000379883 A0A087WUV0 522 aaPredicted RBP8.41□□□□□ -1.06
DDX58-202ENST00000379883 ST5P78524 1137 aa8.41□□□□□ -1.06
DDX58-202ENST00000379883 TTLL5Q6EMB2 1281 aa8.41□□□□□ -1.06
DDX58-202ENST00000379883 SUGP1Q8IWZ8 645 aaKnown RBP8.41□□□□□ -1.06
DDX58-202ENST00000379883 CEP89Q96ST8 783 aa8.41□□□□□ -1.06
DDX58-202ENST00000379883 MYO1BO43795 1136 aa8.41□□□□□ -1.06
DDX58-202ENST00000379883 SURF6O75683 361 aaKnown RBP8.41□□□□□ -1.06
DDX58-202ENST00000379883 RDXP35241 583 aaKnown RBP8.41□□□□□ -1.06
DDX58-202ENST00000379883 CDC37L1Q7L3B6 337 aa8.41□□□□□ -1.06
DDX58-202ENST00000379883 LARP6Q9BRS8 491 aaKnown RBP8.41□□□□□ -1.06
DDX58-202ENST00000379883 LRRC7Q96NW7 1537 aa8.41□□□□□ -1.06
DDX58-202ENST00000379883 EIF3CLB5ME19 914 aaKnown RBP8.4□□□□□ -1.06
DDX58-202ENST00000379883 TXLNAP40222 546 aa8.4□□□□□ -1.06
DDX58-202ENST00000379883 FAM160A1Q05DH4 1040 aa8.4□□□□□ -1.06
DDX58-202ENST00000379883 CCDC102AQ96A19 550 aa8.4□□□□□ -1.06
DDX58-202ENST00000379883 EIF3CQ99613 913 aaKnown RBP8.4□□□□□ -1.06
DDX58-202ENST00000379883 BCCIPQ9P287 314 aaKnown RBP eCLIP8.4□□□□□ -1.06
DDX58-202ENST00000379883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.4□□□□□ -1.06
DDX58-202ENST00000379883 RPS6KA5O75582 802 aa8.4□□□□□ -1.06
DDX58-202ENST00000379883 SEC31AO94979 1220 aaKnown RBP8.4□□□□□ -1.06
DDX58-202ENST00000379883 CCDC30Q5VVM6 783 aa8.4□□□□□ -1.06
DDX58-202ENST00000379883 GNG11P61952 73 aa8.4□□□□□ -1.06
DDX58-202ENST00000379883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.4□□□□□ -1.06
DDX58-202ENST00000379883 NECAB1Q8N987 351 aa8.4□□□□□ -1.06
DDX58-202ENST00000379883 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.06
DDX58-202ENST00000379883 CTCFLQ8NI51 663 aaPredicted RBP8.4□□□□□ -1.06
DDX58-202ENST00000379883 FAM71BQ8TC56 605 aa8.4□□□□□ -1.06
DDX58-202ENST00000379883 SERPINC1P01008 464 aa8.4□□□□□ -1.07
DDX58-202ENST00000379883 TDO2P48775 406 aa8.4□□□□□ -1.07
DDX58-202ENST00000379883 MNAT1P51948 309 aa8.4□□□□□ -1.07
DDX58-202ENST00000379883 ARID5BQ14865 1188 aa8.4□□□□□ -1.07
DDX58-202ENST00000379883 E4F1Q66K89 784 aaPredicted RBP8.4□□□□□ -1.07
DDX58-202ENST00000379883 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.07
DDX58-202ENST00000379883 BPIFA3Q9BQP9 254 aa8.4□□□□□ -1.07
DDX58-202ENST00000379883 MED4Q9NPJ6 270 aa8.4□□□□□ -1.07
DDX58-202ENST00000379883 IFNKQ9P0W0 207 aa8.4□□□□□ -1.07
DDX58-202ENST00000379883 HMG20BQ9P0W2 317 aa8.4□□□□□ -1.07
DDX58-202ENST00000379883 STK26Q9P289 416 aa8.4□□□□□ -1.07
DDX58-202ENST00000379883 CDC42BPGQ6DT37 1551 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 SOS1Q07889 1333 aaPredicted RBP8.39□□□□□ -1.07
DDX58-202ENST00000379883 SALL3Q9BXA9 1300 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 TBC1D8O95759 1140 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 ME1P48163 572 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 ME3Q16798 604 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 LONRF2Q1L5Z9 754 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 ZBTB9Q96C00 473 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 ARHGEF10O15013 1369 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 CHL1O00533 1208 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 ARHGAP6O43182 974 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 TOP1P11387 765 aaKnown RBP8.39□□□□□ -1.07
DDX58-202ENST00000379883 CORO7P57737 925 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 MAP9Q49MG5 647 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 SWT1Q5T5J6 900 aaKnown RBP8.39□□□□□ -1.07
DDX58-202ENST00000379883 OLFM4Q6UX06 510 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 C11orf57Q6ZUT1 292 aaPredicted RBP8.39□□□□□ -1.07
DDX58-202ENST00000379883 POTEDQ86YR6 584 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 MICALL1Q8N3F8 863 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 MSL3Q8N5Y2 521 aaKnown RBP8.39□□□□□ -1.07
DDX58-202ENST00000379883 COG3Q96JB2 828 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 SPG7Q9UQ90 795 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 TRDNQ13061 729 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 CLASRPQ8N2M8 674 aaKnown RBP8.39□□□□□ -1.07
DDX58-202ENST00000379883 FSIP1Q8NA03 581 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 UBXN6Q9BZV1 441 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 IL1RAPL2Q9NP60 686 aa8.39□□□□□ -1.07
DDX58-202ENST00000379883 MAP4K4O95819 1239 aaPredicted RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 IFIT2P09913 472 aaKnown RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 RASEFQ8IZ41 740 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 TSPYL4Q9UJ04 414 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 MCM6Q14566 821 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 LARP1Q6PKG0 1096 aaKnown RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 AFAP1Q8N556 730 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 CEP120Q8N960 986 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 EVI5LQ96CN4 794 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 UTP14AQ9BVJ6 771 aaKnown RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 PARD6BQ9BYG5 372 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 RBM28Q9NW13 759 aaKnown RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 MINK1Q8N4C8 1332 aaPredicted RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 SHTN1A0MZ66 631 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 PPFIA4O75335 1185 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 IL13P35225 146 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 ALDH8A1Q9H2A2 487 aaPredicted RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 ZCCHC17Q9NP64 241 aaKnown RBP8.38□□□□□ -1.07
DDX58-202ENST00000379883 DONSONQ9NYP3 566 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 ERLIN2O94905 339 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 GYS2P54840 703 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 APOBRQ0VD83 1088 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 KRT24Q2M2I5 525 aa8.38□□□□□ -1.07
DDX58-202ENST00000379883 TADA2BQ86TJ2 420 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms