RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 IFIT5Q13325 482 aaKnown RBP18.2■□□□□ 0.5
SNX2-201ENST00000379516 TAF7LQ5H9L4 462 aa18.2■□□□□ 0.5
SNX2-201ENST00000379516 EDC3Q96F86 508 aaKnown RBP18.2■□□□□ 0.5
SNX2-201ENST00000379516 FAM227BQ96M60 508 aa18.2■□□□□ 0.5
SNX2-201ENST00000379516 NMIQ13287 307 aaPredicted RBP18.2■□□□□ 0.5
SNX2-201ENST00000379516 IL17RAQ96F46 866 aa18.2■□□□□ 0.5
SNX2-201ENST00000379516 IRS4O14654 1257 aaPredicted RBP18.19■□□□□ 0.5
SNX2-201ENST00000379516 ZNF34Q8IZ26 560 aa18.19■□□□□ 0.5
SNX2-201ENST00000379516 DNAJC2Q99543 621 aaKnown RBP18.19■□□□□ 0.5
SNX2-201ENST00000379516 UBN2Q6ZU65 1347 aa18.19■□□□□ 0.5
SNX2-201ENST00000379516 CEP126Q9P2H0 1117 aa18.19■□□□□ 0.5
SNX2-201ENST00000379516 NDUFB9Q9Y6M9 179 aa18.19■□□□□ 0.5
SNX2-201ENST00000379516 PTH1RQ03431 593 aa18.18■□□□□ 0.5
SNX2-201ENST00000379516 HAUS7Q99871 368 aa18.18■□□□□ 0.5
SNX2-201ENST00000379516 FBXO3Q9UK99 471 aa18.18■□□□□ 0.5
SNX2-201ENST00000379516 MCM2P49736 904 aa18.17■□□□□ 0.5
SNX2-201ENST00000379516 CTSWP56202 376 aa18.17■□□□□ 0.5
SNX2-201ENST00000379516 TTLL11Q8NHH1 800 aa18.17■□□□□ 0.5
SNX2-201ENST00000379516 UPF3BQ9BZI7 483 aaKnown RBP18.17■□□□□ 0.5
SNX2-201ENST00000379516 SNX14Q9Y5W7 946 aa18.17■□□□□ 0.5
SNX2-201ENST00000379516 A0A1B0GUL7 405 aa18.17■□□□□ 0.5
SNX2-201ENST00000379516 CERKQ8TCT0 537 aa18.17■□□□□ 0.5
SNX2-201ENST00000379516 A0A0D9SFI3 127 aa18.16■□□□□ 0.5
SNX2-201ENST00000379516 ITGA6P23229 1130 aa18.16■□□□□ 0.5
SNX2-201ENST00000379516 GREM2Q9H772 168 aa18.16■□□□□ 0.5
SNX2-201ENST00000379516 ZNF609O15014 1411 aa18.16■□□□□ 0.5
SNX2-201ENST00000379516 PDE8AO60658 829 aa18.16■□□□□ 0.5
SNX2-201ENST00000379516 DEKP35659 375 aaKnown RBP18.16■□□□□ 0.5
SNX2-201ENST00000379516 MEX3CQ5U5Q3 659 aaKnown RBP18.16■□□□□ 0.5
SNX2-201ENST00000379516 RASEFQ8IZ41 740 aa18.16■□□□□ 0.5
SNX2-201ENST00000379516 CCDC171Q6TFL3 1326 aa18.15■□□□□ 0.5
SNX2-201ENST00000379516 ANKRD18BA2A2Z9 1011 aa18.15■□□□□ 0.5
SNX2-201ENST00000379516 CAMTA2O94983 1202 aa18.15■□□□□ 0.5
SNX2-201ENST00000379516 AKAP2Q9Y2D5 859 aa18.15■□□□□ 0.5
SNX2-201ENST00000379516 ANKRD36CQ5JPF3 1778 aa18.14■□□□□ 0.5
SNX2-201ENST00000379516 FAM177BA6PVY3 158 aa18.14■□□□□ 0.5
SNX2-201ENST00000379516 MCM4P33991 863 aa18.14■□□□□ 0.5
SNX2-201ENST00000379516 RAB3GAP1Q15042 981 aa18.14■□□□□ 0.5
SNX2-201ENST00000379516 SUSD4Q5VX71 490 aa18.14■□□□□ 0.5
SNX2-201ENST00000379516 DDX46Q7L014 1031 aaKnown RBP18.14■□□□□ 0.5
SNX2-201ENST00000379516 TMX3Q96JJ7 454 aa18.14■□□□□ 0.5
SNX2-201ENST00000379516 SNRKQ9NRH2 765 aa18.14■□□□□ 0.5
SNX2-201ENST00000379516 NUP98P52948 1817 aa18.14■□□□□ 0.49
SNX2-201ENST00000379516 KCNJ4P48050 445 aa18.14■□□□□ 0.49
SNX2-201ENST00000379516 PRPF40BQ6NWY9 871 aaKnown RBP18.14■□□□□ 0.49
SNX2-201ENST00000379516 LDHAL6AQ6ZMR3 332 aa18.14■□□□□ 0.49
SNX2-201ENST00000379516 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
SNX2-201ENST00000379516 TNPO1Q92973 898 aaKnown RBP18.14■□□□□ 0.49
SNX2-201ENST00000379516 PTF1AQ7RTS3 328 aa18.13■□□□□ 0.49
SNX2-201ENST00000379516 LINC00116Q8NCU8 138 aa18.13■□□□□ 0.49
SNX2-201ENST00000379516 MAP4K1Q92918 833 aa18.13■□□□□ 0.49
SNX2-201ENST00000379516 UTP14AQ9BVJ6 771 aaKnown RBP18.13■□□□□ 0.49
SNX2-201ENST00000379516 RBM8AQ9Y5S9 174 aaKnown RBP18.13■□□□□ 0.49
SNX2-201ENST00000379516 GOLIM4O00461 696 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 IFIT1P09914 478 aaKnown RBP18.12■□□□□ 0.49
SNX2-201ENST00000379516 KCNQ4P56696 695 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 NECTIN1Q15223 517 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 METTL24Q5JXM2 366 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 GORABQ5T7V8 394 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 ZNF589Q86UQ0 364 aaPredicted RBP18.12■□□□□ 0.49
SNX2-201ENST00000379516 ZGPATQ8N5A5 531 aaKnown RBP18.12■□□□□ 0.49
SNX2-201ENST00000379516 KBTBD3Q8NAB2 608 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 IL27Q8NEV9 243 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
SNX2-201ENST00000379516 CNNM1Q9NRU3 951 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 PAG1Q9NWQ8 432 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 RIPOR2Q9Y4F9 1068 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 SH3TC1Q8TE82 1336 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 MED23Q9ULK4 1368 aa18.12■□□□□ 0.49
SNX2-201ENST00000379516 HSPA1LP34931 641 aa18.11■□□□□ 0.49
SNX2-201ENST00000379516 PARP10Q53GL7 1025 aa18.11■□□□□ 0.49
SNX2-201ENST00000379516 XAGE2Q96GT9 111 aa18.11■□□□□ 0.49
SNX2-201ENST00000379516 NIP7Q9Y221 180 aaKnown RBP eCLIP18.11■□□□□ 0.49
SNX2-201ENST00000379516 CICQ96RK0 1608 aaPredicted RBP18.11■□□□□ 0.49
SNX2-201ENST00000379516 RFX7Q2KHR2 1363 aa18.11■□□□□ 0.49
SNX2-201ENST00000379516 RREB1Q92766 1687 aa18.11■□□□□ 0.49
SNX2-201ENST00000379516 HCLS1P14317 486 aaPredicted RBP18.11■□□□□ 0.49
SNX2-201ENST00000379516 CCDC158Q5M9N0 1113 aa18.11■□□□□ 0.49
SNX2-201ENST00000379516 FAM182BQ5T319 152 aa18.11■□□□□ 0.49
SNX2-201ENST00000379516 AK7Q96M32 723 aa18.11■□□□□ 0.49
SNX2-201ENST00000379516 CHGBP05060 677 aa18.1■□□□□ 0.49
SNX2-201ENST00000379516 ZKSCAN1P17029 563 aaPredicted RBP18.1■□□□□ 0.49
SNX2-201ENST00000379516 ADORA1P30542 326 aa18.1■□□□□ 0.49
SNX2-201ENST00000379516 KCNB2Q92953 911 aa18.1■□□□□ 0.49
SNX2-201ENST00000379516 CASTP20810 708 aaKnown RBP18.1■□□□□ 0.49
SNX2-201ENST00000379516 TTC39AQ5SRH9 613 aa18.1■□□□□ 0.49
SNX2-201ENST00000379516 CREB3L3Q68CJ9 461 aa18.1■□□□□ 0.49
SNX2-201ENST00000379516 GJD4Q96KN9 370 aaPredicted RBP18.1■□□□□ 0.49
SNX2-201ENST00000379516 ZNF652Q9Y2D9 606 aa18.1■□□□□ 0.49
SNX2-201ENST00000379516 MYH14Q7Z406 1995 aaKnown RBP18.09■□□□□ 0.49
SNX2-201ENST00000379516 SSFA2P28290 1259 aa18.09■□□□□ 0.49
SNX2-201ENST00000379516 AEBP2Q6ZN18 517 aaPredicted RBP18.09■□□□□ 0.49
SNX2-201ENST00000379516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.09■□□□□ 0.49
SNX2-201ENST00000379516 TAF5LO75529 589 aa18.08■□□□□ 0.49
SNX2-201ENST00000379516 NUCB2P80303 420 aa18.08■□□□□ 0.49
SNX2-201ENST00000379516 CUL4AQ13619 759 aa18.08■□□□□ 0.49
SNX2-201ENST00000379516 ATP2B3Q16720 1220 aa18.08■□□□□ 0.49
SNX2-201ENST00000379516 ADCK5Q3MIX3 580 aa18.08■□□□□ 0.49
SNX2-201ENST00000379516 JAKMIP1Q96N16 626 aaKnown RBP18.08■□□□□ 0.49
SNX2-201ENST00000379516 GBP4Q96PP9 640 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms