RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 PLA2G12BQ9BX93 195 aa17.83■□□□□ 0.45
RAB3IP-203ENST00000378809 KCNJ4P48050 445 aa17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 PTH1RQ03431 593 aa17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 ITPK1Q13572 414 aa17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 CEP126Q9P2H0 1117 aa17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 CDHR2Q9BYE9 1310 aa17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 IRS4O14654 1257 aaPredicted RBP17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 MCM4P33991 863 aa17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 SMARCC1Q92922 1105 aaPredicted RBP17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 GPR108Q9NPR9 543 aa17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 SNX14Q9Y5W7 946 aa17.82■□□□□ 0.44
RAB3IP-203ENST00000378809 A0A0D9SFI3 127 aa17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 EIF5P55010 431 aaKnown RBP17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 RAB3GAP1Q15042 981 aa17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 TNPO1Q92973 898 aaKnown RBP17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 USP21Q9UK80 565 aa17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 A0A1B0GUL7 405 aa17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 CSF1RP07333 972 aa17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 CTSWP56202 376 aa17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 DDX46Q7L014 1031 aaKnown RBP17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 TMX3Q96JJ7 454 aa17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 HAUS7Q99871 368 aa17.81■□□□□ 0.44
RAB3IP-203ENST00000378809 UBN2Q6ZU65 1347 aa17.8■□□□□ 0.44
RAB3IP-203ENST00000378809 FAM177BA6PVY3 158 aa17.8■□□□□ 0.44
RAB3IP-203ENST00000378809 ITGA6P23229 1130 aa17.8■□□□□ 0.44
RAB3IP-203ENST00000378809 PRPF40BQ6NWY9 871 aaKnown RBP17.8■□□□□ 0.44
RAB3IP-203ENST00000378809 RASEFQ8IZ41 740 aa17.8■□□□□ 0.44
RAB3IP-203ENST00000378809 GREM2Q9H772 168 aa17.8■□□□□ 0.44
RAB3IP-203ENST00000378809 GORABQ5T7V8 394 aa17.79■□□□□ 0.44
RAB3IP-203ENST00000378809 ZGPATQ8N5A5 531 aaKnown RBP17.79■□□□□ 0.44
RAB3IP-203ENST00000378809 IL17RAQ96F46 866 aa17.79■□□□□ 0.44
RAB3IP-203ENST00000378809 ZNF609O15014 1411 aa17.79■□□□□ 0.44
RAB3IP-203ENST00000378809 GSE1Q14687 1217 aa17.79■□□□□ 0.44
RAB3IP-203ENST00000378809 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
RAB3IP-203ENST00000378809 FNBP4Q8N3X1 1017 aaPredicted RBP17.79■□□□□ 0.44
RAB3IP-203ENST00000378809 TTLL11Q8NHH1 800 aa17.79■□□□□ 0.44
RAB3IP-203ENST00000378809 GBP4Q96PP9 640 aa17.79■□□□□ 0.44
RAB3IP-203ENST00000378809 ANKRD18BA2A2Z9 1011 aa17.78■□□□□ 0.44
RAB3IP-203ENST00000378809 GOLIM4O00461 696 aa17.78■□□□□ 0.44
RAB3IP-203ENST00000378809 ZNF34Q8IZ26 560 aa17.78■□□□□ 0.44
RAB3IP-203ENST00000378809 CWC22Q9HCG8 908 aaKnown RBP17.78■□□□□ 0.44
RAB3IP-203ENST00000378809 FBXO3Q9UK99 471 aa17.78■□□□□ 0.44
RAB3IP-203ENST00000378809 AKAP2Q9Y2D5 859 aa17.78■□□□□ 0.44
RAB3IP-203ENST00000378809 SPATA31A6Q5VVP1 1343 aa17.78■□□□□ 0.44
RAB3IP-203ENST00000378809 PDE8AO60658 829 aa17.77■□□□□ 0.44
RAB3IP-203ENST00000378809 ZKSCAN1P17029 563 aaPredicted RBP17.77■□□□□ 0.44
RAB3IP-203ENST00000378809 SSFA2P28290 1259 aa17.77■□□□□ 0.44
RAB3IP-203ENST00000378809 LDHAL6AQ6ZMR3 332 aa17.77■□□□□ 0.44
RAB3IP-203ENST00000378809 RBM8AQ9Y5S9 174 aaKnown RBP17.77■□□□□ 0.44
RAB3IP-203ENST00000378809 IFIT1P09914 478 aaKnown RBP17.77■□□□□ 0.43
RAB3IP-203ENST00000378809 CASTP20810 708 aaKnown RBP17.77■□□□□ 0.43
RAB3IP-203ENST00000378809 METTL24Q5JXM2 366 aa17.77■□□□□ 0.43
RAB3IP-203ENST00000378809 ZNF589Q86UQ0 364 aaPredicted RBP17.77■□□□□ 0.43
RAB3IP-203ENST00000378809 CNNM1Q9NRU3 951 aa17.77■□□□□ 0.43
RAB3IP-203ENST00000378809 PAG1Q9NWQ8 432 aa17.77■□□□□ 0.43
RAB3IP-203ENST00000378809 DDX11L8A8MPP1 907 aa17.76■□□□□ 0.43
RAB3IP-203ENST00000378809 CAMTA2O94983 1202 aa17.76■□□□□ 0.43
RAB3IP-203ENST00000378809 KCNQ4P56696 695 aa17.76■□□□□ 0.43
RAB3IP-203ENST00000378809 NUCB2P80303 420 aa17.76■□□□□ 0.43
RAB3IP-203ENST00000378809 CCDC158Q5M9N0 1113 aa17.76■□□□□ 0.43
RAB3IP-203ENST00000378809 TTC39AQ5SRH9 613 aa17.76■□□□□ 0.43
RAB3IP-203ENST00000378809 SUSD4Q5VX71 490 aa17.76■□□□□ 0.43
RAB3IP-203ENST00000378809 KBTBD3Q8NAB2 608 aa17.76■□□□□ 0.43
RAB3IP-203ENST00000378809 MAP4K1Q92918 833 aa17.76■□□□□ 0.43
RAB3IP-203ENST00000378809 JAKMIP1Q96N16 626 aaKnown RBP17.76■□□□□ 0.43
RAB3IP-203ENST00000378809 MED23Q9ULK4 1368 aa17.75■□□□□ 0.43
RAB3IP-203ENST00000378809 CHGBP05060 677 aa17.75■□□□□ 0.43
RAB3IP-203ENST00000378809 CREB3L3Q68CJ9 461 aa17.75■□□□□ 0.43
RAB3IP-203ENST00000378809 UTP14AQ9BVJ6 771 aaKnown RBP17.75■□□□□ 0.43
RAB3IP-203ENST00000378809 ANKRD36CQ5JPF3 1778 aa17.75■□□□□ 0.43
RAB3IP-203ENST00000378809 SH3TC1Q8TE82 1336 aa17.75■□□□□ 0.43
RAB3IP-203ENST00000378809 HCLS1P14317 486 aaPredicted RBP17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 CPA1P15085 419 aa17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 ADORA1P30542 326 aa17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 NECTIN1Q15223 517 aa17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 XAGE2Q96GT9 111 aa17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 SNRKQ9NRH2 765 aa17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 NIP7Q9Y221 180 aaKnown RBP eCLIP17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 RFX7Q2KHR2 1363 aa17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 FKBP4Q02790 459 aaKnown RBP eCLIP17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 ADCK5Q3MIX3 580 aa17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 FAM182BQ5T319 152 aa17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 RNF20Q5VTR2 975 aa17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 NUP98P52948 1817 aa17.74■□□□□ 0.43
RAB3IP-203ENST00000378809 AK2P54819 239 aa17.73■□□□□ 0.43
RAB3IP-203ENST00000378809 PKP1Q13835 747 aa17.73■□□□□ 0.43
RAB3IP-203ENST00000378809 CCDC129Q6ZRS4 1044 aa17.73■□□□□ 0.43
RAB3IP-203ENST00000378809 LINC00116Q8NCU8 138 aa17.73■□□□□ 0.43
RAB3IP-203ENST00000378809 IL27Q8NEV9 243 aa17.73■□□□□ 0.43
RAB3IP-203ENST00000378809 SEC62Q99442 399 aaKnown RBP17.73■□□□□ 0.43
RAB3IP-203ENST00000378809 SLC27A2O14975 620 aa17.72■□□□□ 0.43
RAB3IP-203ENST00000378809 ATP2B3Q16720 1220 aa17.72■□□□□ 0.43
RAB3IP-203ENST00000378809 MCMDC2Q4G0Z9 681 aa17.72■□□□□ 0.43
RAB3IP-203ENST00000378809 PARP10Q53GL7 1025 aa17.72■□□□□ 0.43
RAB3IP-203ENST00000378809 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
RAB3IP-203ENST00000378809 ZNF652Q9Y2D9 606 aa17.72■□□□□ 0.43
RAB3IP-203ENST00000378809 RIPOR2Q9Y4F9 1068 aa17.72■□□□□ 0.43
RAB3IP-203ENST00000378809 CYP46A1Q9Y6A2 500 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms