RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 PLBD2Q8NHP8 589 aa20.48■□□□□ 0.87
TRIM27-201ENST00000377194 TTC12Q9H892 705 aaPredicted RBP20.48■□□□□ 0.87
TRIM27-201ENST00000377194 DTNBO60941 627 aa20.47■□□□□ 0.87
TRIM27-201ENST00000377194 CASP7P55210 303 aa20.47■□□□□ 0.87
TRIM27-201ENST00000377194 CCDC171Q6TFL3 1326 aa20.47■□□□□ 0.87
TRIM27-201ENST00000377194 A0A0D9SFI3 127 aa20.47■□□□□ 0.87
TRIM27-201ENST00000377194 LARGE1O95461 756 aa20.46■□□□□ 0.87
TRIM27-201ENST00000377194 TFCP2Q12800 502 aa20.46■□□□□ 0.87
TRIM27-201ENST00000377194 TTLL7Q6ZT98 887 aa20.46■□□□□ 0.87
TRIM27-201ENST00000377194 KCNB2Q92953 911 aa20.46■□□□□ 0.87
TRIM27-201ENST00000377194 JAKMIP1Q96N16 626 aaKnown RBP20.46■□□□□ 0.87
TRIM27-201ENST00000377194 SLAIN2Q9P270 581 aa20.46■□□□□ 0.87
TRIM27-201ENST00000377194 DBNLQ9UJU6 430 aaKnown RBP20.46■□□□□ 0.87
TRIM27-201ENST00000377194 LIMCH1Q9UPQ0 1083 aa20.46■□□□□ 0.87
TRIM27-201ENST00000377194 A1BGP04217 495 aa20.46■□□□□ 0.87
TRIM27-201ENST00000377194 SOS2Q07890 1332 aaPredicted RBP20.46■□□□□ 0.87
TRIM27-201ENST00000377194 RBM8AQ9Y5S9 174 aaKnown RBP20.45■□□□□ 0.86
TRIM27-201ENST00000377194 NDUFB9Q9Y6M9 179 aa20.45■□□□□ 0.86
TRIM27-201ENST00000377194 PCDH11XQ9BZA7 1347 aa20.45■□□□□ 0.86
TRIM27-201ENST00000377194 PCDH11YQ9BZA8 1340 aa20.45■□□□□ 0.86
TRIM27-201ENST00000377194 NOLC1Q14978 699 aaKnown RBP eCLIP20.45■□□□□ 0.86
TRIM27-201ENST00000377194 MAP4K1Q92918 833 aa20.45■□□□□ 0.86
TRIM27-201ENST00000377194 FSD1Q9BTV5 496 aa20.45■□□□□ 0.86
TRIM27-201ENST00000377194 GDPD2Q9HCC8 539 aa20.44■□□□□ 0.86
TRIM27-201ENST00000377194 RPAP1Q9BWH6 1393 aaPredicted RBP20.44■□□□□ 0.86
TRIM27-201ENST00000377194 ARFGEF2Q9Y6D5 1785 aa20.44■□□□□ 0.86
TRIM27-201ENST00000377194 TNNI3KQ59H18 835 aa20.44■□□□□ 0.86
TRIM27-201ENST00000377194 ZSWIM6Q9HCJ5 1215 aa20.44■□□□□ 0.86
TRIM27-201ENST00000377194 USP25Q9UHP3 1055 aa20.44■□□□□ 0.86
TRIM27-201ENST00000377194 FPGT-TNNI3KV9GXZ4 949 aa20.44■□□□□ 0.86
TRIM27-201ENST00000377194 AFDNP55196 1824 aaKnown RBP20.44■□□□□ 0.86
TRIM27-201ENST00000377194 COL5A2P05997 1499 aaPredicted RBP20.44■□□□□ 0.86
TRIM27-201ENST00000377194 LMBR1LQ6UX01 489 aa20.43■□□□□ 0.86
TRIM27-201ENST00000377194 CHGBP05060 677 aa20.43■□□□□ 0.86
TRIM27-201ENST00000377194 CREB3L3Q68CJ9 461 aa20.43■□□□□ 0.86
TRIM27-201ENST00000377194 SNRKQ9NRH2 765 aa20.43■□□□□ 0.86
TRIM27-201ENST00000377194 ZNF335Q9H4Z2 1342 aaPredicted RBP20.43■□□□□ 0.86
TRIM27-201ENST00000377194 GADD45BO75293 160 aaPredicted RBP20.42■□□□□ 0.86
TRIM27-201ENST00000377194 ZNF589Q86UQ0 364 aaPredicted RBP20.42■□□□□ 0.86
TRIM27-201ENST00000377194 BBXQ8WY36 941 aaPredicted RBP20.42■□□□□ 0.86
TRIM27-201ENST00000377194 STRN4Q9NRL3 753 aa20.42■□□□□ 0.86
TRIM27-201ENST00000377194 PDRG1Q9NUG6 133 aa20.42■□□□□ 0.86
TRIM27-201ENST00000377194 TAF6LQ9Y6J9 622 aa20.42■□□□□ 0.86
TRIM27-201ENST00000377194 ERVV-2B6SEH9 535 aa20.42■□□□□ 0.86
TRIM27-201ENST00000377194 FOXO4P98177 505 aa20.42■□□□□ 0.86
TRIM27-201ENST00000377194 PIBF1Q8WXW3 757 aa20.42■□□□□ 0.86
TRIM27-201ENST00000377194 BCL2L12Q9HB09 334 aa20.42■□□□□ 0.86
TRIM27-201ENST00000377194 COL15A1P39059 1388 aa20.41■□□□□ 0.86
TRIM27-201ENST00000377194 HIP1O00291 1037 aa20.41■□□□□ 0.86
TRIM27-201ENST00000377194 VPS53Q5VIR6 699 aa20.41■□□□□ 0.86
TRIM27-201ENST00000377194 PRIMPOLQ96LW4 560 aa20.41■□□□□ 0.86
TRIM27-201ENST00000377194 TM6SF1Q9BZW5 370 aa20.41■□□□□ 0.86
TRIM27-201ENST00000377194 KIF3AQ9Y496 699 aa20.41■□□□□ 0.86
TRIM27-201ENST00000377194 H7C1W4 665 aa20.41■□□□□ 0.86
TRIM27-201ENST00000377194 IL2RBP14784 551 aa20.41■□□□□ 0.86
TRIM27-201ENST00000377194 NKX1-1Q15270 411 aaPredicted RBP20.41■□□□□ 0.86
TRIM27-201ENST00000377194 DBNDD2Q9BQY9 259 aa20.41■□□□□ 0.86
TRIM27-201ENST00000377194 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
TRIM27-201ENST00000377194 WDR33Q9C0J8 1336 aaKnown RBP20.41■□□□□ 0.86
TRIM27-201ENST00000377194 KCNJ4P48050 445 aa20.4■□□□□ 0.86
TRIM27-201ENST00000377194 SYAP1Q96A49 352 aaPredicted RBP20.4■□□□□ 0.86
TRIM27-201ENST00000377194 GTPBP4Q9BZE4 634 aaKnown RBP20.4■□□□□ 0.86
TRIM27-201ENST00000377194 CYP46A1Q9Y6A2 500 aa20.4■□□□□ 0.86
TRIM27-201ENST00000377194 PARP4Q9UKK3 1724 aaKnown RBP20.4■□□□□ 0.86
TRIM27-201ENST00000377194 SLC27A2O14975 620 aa20.4■□□□□ 0.86
TRIM27-201ENST00000377194 ATP5JP18859 108 aa20.4■□□□□ 0.86
TRIM27-201ENST00000377194 ZKSCAN1P17029 563 aaPredicted RBP20.4■□□□□ 0.86
TRIM27-201ENST00000377194 SYT1P21579 422 aa20.4■□□□□ 0.86
TRIM27-201ENST00000377194 ST3GAL1Q11201 340 aa20.4■□□□□ 0.86
TRIM27-201ENST00000377194 CCDC83Q8IWF9 413 aa20.4■□□□□ 0.86
TRIM27-201ENST00000377194 CARD10Q9BWT7 1032 aa20.4■□□□□ 0.86
TRIM27-201ENST00000377194 ZBTB3Q9H5J0 574 aa20.4■□□□□ 0.86
TRIM27-201ENST00000377194 MED23Q9ULK4 1368 aa20.39■□□□□ 0.86
TRIM27-201ENST00000377194 HMGN5P82970 282 aaKnown RBP20.39■□□□□ 0.85
TRIM27-201ENST00000377194 CHMP3Q9Y3E7 222 aa20.39■□□□□ 0.85
TRIM27-201ENST00000377194 U2AF2P26368 475 aaKnown RBP eCLIP20.39■□□□□ 0.852e-15■■■■□ 22.7
TRIM27-201ENST00000377194 LAMB4A4D0S4 1761 aa20.38■□□□□ 0.85
TRIM27-201ENST00000377194 TCHHQ07283 1943 aa20.38■□□□□ 0.85
TRIM27-201ENST00000377194 PLCB2Q00722 1185 aa20.38■□□□□ 0.85
TRIM27-201ENST00000377194 ME3Q16798 604 aa20.38■□□□□ 0.85
TRIM27-201ENST00000377194 KCPQ6ZWJ8 1503 aa20.38■□□□□ 0.85
TRIM27-201ENST00000377194 PDCL2Q8N4E4 241 aa20.38■□□□□ 0.85
TRIM27-201ENST00000377194 TCEANC2Q96MN5 208 aa20.38■□□□□ 0.85
TRIM27-201ENST00000377194 CCDC9Q9Y3X0 531 aaKnown RBP20.38■□□□□ 0.85
TRIM27-201ENST00000377194 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.38■□□□□ 0.85
TRIM27-201ENST00000377194 USP48Q86UV5 1035 aa20.37■□□□□ 0.85
TRIM27-201ENST00000377194 CWC25Q9NXE8 425 aaPredicted RBP20.37■□□□□ 0.85
TRIM27-201ENST00000377194 TPCN1Q9ULQ1 816 aa20.37■□□□□ 0.85
TRIM27-201ENST00000377194 SMC3Q9UQE7 1217 aa20.37■□□□□ 0.85
TRIM27-201ENST00000377194 STX6O43752 255 aa20.37■□□□□ 0.85
TRIM27-201ENST00000377194 ADCY5O95622 1261 aa20.37■□□□□ 0.85
TRIM27-201ENST00000377194 GTF2F1P35269 517 aaKnown RBP eCLIP20.37■□□□□ 0.85
TRIM27-201ENST00000377194 ATG9AQ7Z3C6 839 aa20.37■□□□□ 0.85
TRIM27-201ENST00000377194 NECAB1Q8N987 351 aa20.37■□□□□ 0.85
TRIM27-201ENST00000377194 TAF5LO75529 589 aa20.36■□□□□ 0.85
TRIM27-201ENST00000377194 ZSCAN22P10073 491 aaPredicted RBP20.36■□□□□ 0.85
TRIM27-201ENST00000377194 DNAJC2Q99543 621 aaKnown RBP20.36■□□□□ 0.85
TRIM27-201ENST00000377194 STRCQ7RTU9 1775 aa20.36■□□□□ 0.85
TRIM27-201ENST00000377194 KIF20AO95235 890 aa20.36■□□□□ 0.85
TRIM27-201ENST00000377194 EVA1CP58658 441 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms