RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 DEPDC5O75140 1603 aa11.91□□□□□ -0.5
ZNF550-203ENST00000376230 IGKV5-2P06315 115 aa11.9□□□□□ -0.5
ZNF550-203ENST00000376230 RUFY3Q7L099 469 aa11.9□□□□□ -0.5
ZNF550-203ENST00000376230 ZC3H13Q5T200 1668 aaKnown RBP11.9□□□□□ -0.5
ZNF550-203ENST00000376230 MYO5BQ9ULV0 1848 aa11.9□□□□□ -0.5
ZNF550-203ENST00000376230 CFAP74Q9C0B2 1584 aa11.9□□□□□ -0.5
ZNF550-203ENST00000376230 IFIT5Q13325 482 aaKnown RBP11.9□□□□□ -0.5
ZNF550-203ENST00000376230 SASS6Q6UVJ0 657 aa11.9□□□□□ -0.5
ZNF550-203ENST00000376230 MPHOSPH8Q99549 860 aa11.9□□□□□ -0.5
ZNF550-203ENST00000376230 CRB1P82279 1406 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 TAF5LO75529 589 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 KRT85P78386 507 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 COL9A3Q14050 684 aaPredicted RBP11.89□□□□□ -0.51
ZNF550-203ENST00000376230 ME3Q16798 604 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 COL3A1P02461 1466 aaPredicted RBP11.89□□□□□ -0.51
ZNF550-203ENST00000376230 MINDY4BA8MYZ0 360 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 ZSCAN22P10073 491 aaPredicted RBP11.89□□□□□ -0.51
ZNF550-203ENST00000376230 NEK1Q96PY6 1258 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 TNMDQ9H2S6 317 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 GOLGA6L19H0YKK7 550 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 ALDH1L1O75891 902 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 VPS53Q5VIR6 699 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 FILIP1Q7Z7B0 1213 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 DBNLQ9UJU6 430 aaKnown RBP11.89□□□□□ -0.51
ZNF550-203ENST00000376230 ERBB3P21860 1342 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 CCDC171Q6TFL3 1326 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 PPLO60437 1756 aa11.89□□□□□ -0.51
ZNF550-203ENST00000376230 PI4K2BQ8TCG2 481 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 METTL22Q9BUU2 404 aaPredicted RBP11.88□□□□□ -0.51
ZNF550-203ENST00000376230 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
ZNF550-203ENST00000376230 CEP170BQ9Y4F5 1589 aaPredicted RBP11.88□□□□□ -0.51
ZNF550-203ENST00000376230 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 MICU3Q86XE3 530 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 DCAF5Q96JK2 942 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 RIMBP3CA6NJZ7 1639 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 RIMBP3BA6NNM3 1639 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 RIMBP3Q9UFD9 1639 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 MAP2P11137 1827 aaKnown RBP11.88□□□□□ -0.51
ZNF550-203ENST00000376230 SLC27A2O14975 620 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 NCBP3Q53F19 620 aaKnown RBP11.88□□□□□ -0.51
ZNF550-203ENST00000376230 TNNI3KQ59H18 835 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 FPGT-TNNI3KV9GXZ4 949 aa11.88□□□□□ -0.51
ZNF550-203ENST00000376230 A0A1B0GUL7 405 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 HSPA4P34932 840 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
ZNF550-203ENST00000376230 FTOQ9C0B1 505 aaKnown RBP eCLIP11.87□□□□□ -0.51
ZNF550-203ENST00000376230 TPCN1Q9ULQ1 816 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 TMEM131LA2VDJ0 1609 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 ADORA1P30542 326 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 MIGA1Q8NAN2 632 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 MYL10Q9BUA6 226 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 RAD50Q92878 1312 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 IL2RBP14784 551 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 NOLC1Q14978 699 aaKnown RBP eCLIP11.87□□□□□ -0.51
ZNF550-203ENST00000376230 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 DACT1Q9NYF0 836 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 WWC3Q9ULE0 1092 aa11.87□□□□□ -0.51
ZNF550-203ENST00000376230 ARHGEF28Q8N1W1 1705 aaKnown RBP11.87□□□□□ -0.51
ZNF550-203ENST00000376230 NCOA3Q9Y6Q9 1424 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 ZNF335Q9H4Z2 1342 aaPredicted RBP11.86□□□□□ -0.51
ZNF550-203ENST00000376230 MAP7D2Q96T17 732 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 A0A0G2JLW4 131 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 STARD3NLO95772 234 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 F13A1P00488 732 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 GJB4Q9NTQ9 266 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 PREX1Q8TCU6 1659 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 SYNE3Q6ZMZ3 975 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 CCDC73Q6ZRK6 1079 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 LSG1Q9H089 658 aaKnown RBP11.86□□□□□ -0.51
ZNF550-203ENST00000376230 NUP62CLQ9H1M0 184 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 PAG1Q9NWQ8 432 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
ZNF550-203ENST00000376230 LRP2BPQ9P2M1 347 aa11.86□□□□□ -0.51
ZNF550-203ENST00000376230 HIP1O00291 1037 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 EXOC5O00471 708 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 STK38Q15208 465 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 SLAIN2Q9P270 581 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 DYNC1I1O14576 645 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 GOLGA8BA8MQT2 603 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 PES1O00541 588 aaKnown RBP11.85□□□□□ -0.51
ZNF550-203ENST00000376230 SLC9C2Q5TAH2 1124 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 RAI14Q9P0K7 980 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 KIF3AQ9Y496 699 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 OVOS2A0A0J9YW53 1432 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 OVOS2Q6IE36 1432 aa11.85□□□□□ -0.51
ZNF550-203ENST00000376230 ADCY9O60503 1353 aa11.84□□□□□ -0.51
ZNF550-203ENST00000376230 RASSF8Q8NHQ8 419 aa11.84□□□□□ -0.51
ZNF550-203ENST00000376230 ZNF500O60304 480 aaPredicted RBP11.84□□□□□ -0.51
ZNF550-203ENST00000376230 MARCKSP29966 332 aaPredicted RBP11.84□□□□□ -0.51
ZNF550-203ENST00000376230 TDO2P48775 406 aa11.84□□□□□ -0.51
ZNF550-203ENST00000376230 LUZP1Q86V48 1076 aa11.84□□□□□ -0.51
ZNF550-203ENST00000376230 hCG_1642624A0A1W2PR95 340 aa11.84□□□□□ -0.51
ZNF550-203ENST00000376230 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
ZNF550-203ENST00000376230 C16orf45Q96MC5 204 aaPredicted RBP11.84□□□□□ -0.51
ZNF550-203ENST00000376230 BRD1O95696 1058 aa11.83□□□□□ -0.52
ZNF550-203ENST00000376230 ZAP70P43403 619 aa11.83□□□□□ -0.52
ZNF550-203ENST00000376230 MCMDC2Q4G0Z9 681 aa11.83□□□□□ -0.52
ZNF550-203ENST00000376230 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms