RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 BRD1O95696 1058 aa31.61■■■□□ 2.65
CUL4A-202ENST00000375440 PRIM1P49642 420 aaKnown RBP31.61■■■□□ 2.65
CUL4A-202ENST00000375440 HLFQ16534 295 aa31.61■■■□□ 2.65
CUL4A-202ENST00000375440 FAM89AQ96GI7 184 aa31.61■■■□□ 2.65
CUL4A-202ENST00000375440 DNAJC2Q99543 621 aaKnown RBP31.61■■■□□ 2.65
CUL4A-202ENST00000375440 LIMCH1Q9UPQ0 1083 aa31.61■■■□□ 2.65
CUL4A-202ENST00000375440 SPATA31A1Q5TZJ5 1347 aa31.6■■■□□ 2.65
CUL4A-202ENST00000375440 TIMM10P62072 90 aa31.6■■■□□ 2.65
CUL4A-202ENST00000375440 L1TD1Q5T7N2 865 aaKnown RBP31.6■■■□□ 2.65
CUL4A-202ENST00000375440 PUS3Q9BZE2 481 aaKnown RBP31.6■■■□□ 2.65
CUL4A-202ENST00000375440 ZBTB38Q8NAP3 1195 aaPredicted RBP31.6■■■□□ 2.65
CUL4A-202ENST00000375440 NEUROD6Q96NK8 337 aa31.6■■■□□ 2.65
CUL4A-202ENST00000375440 ARXQ96QS3 562 aa31.6■■■□□ 2.65
CUL4A-202ENST00000375440 PLA2G12BQ9BX93 195 aa31.6■■■□□ 2.65
CUL4A-202ENST00000375440 ZNF609O15014 1411 aa31.6■■■□□ 2.65
CUL4A-202ENST00000375440 GOLGA6L3A6NEY3 463 aa31.59■■■□□ 2.65
CUL4A-202ENST00000375440 ZKSCAN1P17029 563 aaPredicted RBP31.59■■■□□ 2.65
CUL4A-202ENST00000375440 KCNJ4P48050 445 aa31.59■■■□□ 2.65
CUL4A-202ENST00000375440 ZBTB1Q9Y2K1 713 aa31.59■■■□□ 2.65
CUL4A-202ENST00000375440 SLC27A2O14975 620 aa31.59■■■□□ 2.65
CUL4A-202ENST00000375440 VPS53Q5VIR6 699 aa31.58■■■□□ 2.65
CUL4A-202ENST00000375440 LARP6Q9BRS8 491 aaKnown RBP31.58■■■□□ 2.65
CUL4A-202ENST00000375440 CDCA7Q9BWT1 371 aaPredicted RBP31.58■■■□□ 2.65
CUL4A-202ENST00000375440 LMBRD1Q9NUN5 540 aa31.58■■■□□ 2.65
CUL4A-202ENST00000375440 CCDC9Q9Y3X0 531 aaKnown RBP31.58■■■□□ 2.65
CUL4A-202ENST00000375440 CCDC57Q2TAC2 916 aa31.57■■■□□ 2.64
CUL4A-202ENST00000375440 CYP46A1Q9Y6A2 500 aa31.57■■■□□ 2.64
CUL4A-202ENST00000375440 RPAP1Q9BWH6 1393 aaPredicted RBP31.57■■■□□ 2.64
CUL4A-202ENST00000375440 TAF5LO75529 589 aa31.57■■■□□ 2.64
CUL4A-202ENST00000375440 KLHL40Q2TBA0 621 aa31.57■■■□□ 2.64
CUL4A-202ENST00000375440 DDX46Q7L014 1031 aaKnown RBP31.57■■■□□ 2.64
CUL4A-202ENST00000375440 PDRG1Q9NUG6 133 aa31.57■■■□□ 2.64
CUL4A-202ENST00000375440 CHGBP05060 677 aa31.56■■■□□ 2.64
CUL4A-202ENST00000375440 CSF1RP07333 972 aa31.56■■■□□ 2.64
CUL4A-202ENST00000375440 ANKRD36CQ5JPF3 1778 aa31.56■■■□□ 2.64
CUL4A-202ENST00000375440 FOXD4L5Q5VV16 416 aaPredicted RBP31.56■■■□□ 2.64
CUL4A-202ENST00000375440 NLRP10Q86W26 655 aa31.56■■■□□ 2.64
CUL4A-202ENST00000375440 FOXD4L4Q8WXT5 416 aaPredicted RBP31.56■■■□□ 2.64
CUL4A-202ENST00000375440 THRAP3Q9Y2W1 955 aaKnown RBP31.56■■■□□ 2.64
CUL4A-202ENST00000375440 SYNE4Q8N205 404 aa31.55■■■□□ 2.64
CUL4A-202ENST00000375440 KBTBD3Q8NAB2 608 aa31.55■■■□□ 2.64
CUL4A-202ENST00000375440 GPTP24298 496 aa31.54■■■□□ 2.64
CUL4A-202ENST00000375440 CHAMP1Q96JM3 812 aa31.54■■■□□ 2.64
CUL4A-202ENST00000375440 DDX49Q9Y6V7 483 aaKnown RBP31.54■■■□□ 2.64
CUL4A-202ENST00000375440 A0A1B0GUL7 405 aa31.54■■■□□ 2.64
CUL4A-202ENST00000375440 CDHR2Q9BYE9 1310 aa31.54■■■□□ 2.64
CUL4A-202ENST00000375440 NUP98P52948 1817 aa31.53■■■□□ 2.64
CUL4A-202ENST00000375440 FBXO3Q9UK99 471 aa31.53■■■□□ 2.64
CUL4A-202ENST00000375440 LARGE1O95461 756 aa31.53■■■□□ 2.64
CUL4A-202ENST00000375440 DDB1Q16531 1140 aa31.53■■■□□ 2.64
CUL4A-202ENST00000375440 HSP90AB3PQ58FF7 597 aa31.53■■■□□ 2.64
CUL4A-202ENST00000375440 TAF6LQ9Y6J9 622 aa31.53■■■□□ 2.64
CUL4A-202ENST00000375440 COL9A3Q14050 684 aaPredicted RBP31.52■■■□□ 2.64
CUL4A-202ENST00000375440 RNF20Q5VTR2 975 aa31.52■■■□□ 2.64
CUL4A-202ENST00000375440 USPL1Q5W0Q7 1092 aa31.52■■■□□ 2.64
CUL4A-202ENST00000375440 CCDC85AQ96PX6 553 aaPredicted RBP31.52■■■□□ 2.64
CUL4A-202ENST00000375440 CEP126Q9P2H0 1117 aa31.52■■■□□ 2.64
CUL4A-202ENST00000375440 PALLDQ8WX93 1383 aa31.52■■■□□ 2.64
CUL4A-202ENST00000375440 SEC62Q99442 399 aaKnown RBP31.51■■■□□ 2.64
CUL4A-202ENST00000375440 PAG1Q9NWQ8 432 aa31.51■■■□□ 2.64
CUL4A-202ENST00000375440 XRCC6P12956 609 aaKnown RBP eCLIP31.51■■■□□ 2.63
CUL4A-202ENST00000375440 GOLIM4O00461 696 aa31.5■■■□□ 2.63
CUL4A-202ENST00000375440 IL6STP40189 918 aaPredicted RBP31.5■■■□□ 2.63
CUL4A-202ENST00000375440 TSGA10IPQ3SY00 556 aa31.5■■■□□ 2.63
CUL4A-202ENST00000375440 MCMDC2Q4G0Z9 681 aa31.5■■■□□ 2.63
CUL4A-202ENST00000375440 HMG20BQ9P0W2 317 aa31.5■■■□□ 2.63
CUL4A-202ENST00000375440 PSMA5P28066 241 aa31.49■■■□□ 2.63
CUL4A-202ENST00000375440 IFIT5Q13325 482 aaKnown RBP31.49■■■□□ 2.63
CUL4A-202ENST00000375440 CCDC129Q6ZRS4 1044 aa31.49■■■□□ 2.63
CUL4A-202ENST00000375440 PRPF40AO75400 957 aaKnown RBP31.49■■■□□ 2.63
CUL4A-202ENST00000375440 SPATA31A5Q5VU36 1347 aa31.49■■■□□ 2.63
CUL4A-202ENST00000375440 SPATA31A7Q8IWB4 1347 aa31.49■■■□□ 2.63
CUL4A-202ENST00000375440 MARCH10Q8NA82 808 aaPredicted RBP31.49■■■□□ 2.63
CUL4A-202ENST00000375440 SH3TC1Q8TE82 1336 aa31.48■■■□□ 2.63
CUL4A-202ENST00000375440 ERVV-1B6SEH8 477 aa31.48■■■□□ 2.63
CUL4A-202ENST00000375440 ZSCAN31Q96LW9 406 aaPredicted RBP31.48■■■□□ 2.63
CUL4A-202ENST00000375440 ISY1Q9ULR0 285 aaKnown RBP31.48■■■□□ 2.63
CUL4A-202ENST00000375440 NUTM2BA6NNL0 878 aaPredicted RBP31.48■■■□□ 2.63
CUL4A-202ENST00000375440 NUTM2EB1AL46 878 aaPredicted RBP31.48■■■□□ 2.63
CUL4A-202ENST00000375440 DZIP3Q86Y13 1208 aaKnown RBP31.48■■■□□ 2.63
CUL4A-202ENST00000375440 NUTM2AQ8IVF1 878 aaPredicted RBP31.48■■■□□ 2.63
CUL4A-202ENST00000375440 TBC1D2BQ9UPU7 963 aa31.48■■■□□ 2.63
CUL4A-202ENST00000375440 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.48■■■□□ 2.63
CUL4A-202ENST00000375440 MYH3P11055 1940 aa31.47■■■□□ 2.63
CUL4A-202ENST00000375440 TTLL11Q8NHH1 800 aa31.47■■■□□ 2.63
CUL4A-202ENST00000375440 SH2B1Q9NRF2 756 aaPredicted RBP31.46■■■□□ 2.63
CUL4A-202ENST00000375440 SPEF2Q9C093 1822 aa31.46■■■□□ 2.63
CUL4A-202ENST00000375440 WDR33Q9C0J8 1336 aaKnown RBP31.46■■■□□ 2.63
CUL4A-202ENST00000375440 IFIT1P09914 478 aaKnown RBP31.46■■■□□ 2.63
CUL4A-202ENST00000375440 GAS2L3Q86XJ1 694 aa31.46■■■□□ 2.63
CUL4A-202ENST00000375440 TICAM2Q86XR7 235 aa31.46■■■□□ 2.63
CUL4A-202ENST00000375440 TAF7LQ5H9L4 462 aa31.45■■■□□ 2.63
CUL4A-202ENST00000375440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.45■■■□□ 2.63
CUL4A-202ENST00000375440 AKAP2Q9Y2D5 859 aa31.45■■■□□ 2.63
CUL4A-202ENST00000375440 NWD2Q9ULI1 1742 aa31.45■■■□□ 2.63
CUL4A-202ENST00000375440 BLOC1S2Q6QNY1 142 aa31.45■■■□□ 2.62
CUL4A-202ENST00000375440 ACSBG1Q96GR2 724 aa31.45■■■□□ 2.62
CUL4A-202ENST00000375440 ST3GAL1Q11201 340 aa31.44■■■□□ 2.62
CUL4A-202ENST00000375440 ME3Q16798 604 aa31.44■■■□□ 2.62
CUL4A-202ENST00000375440 GREM2Q9H772 168 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms