RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 GKAP1Q5VSY0 366 aaPredicted RBP6.77□□□□□ -1.33
SCN2A-202ENST00000375427 CPLX4Q7Z7G2 160 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 SYCP3Q8IZU3 236 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 CAPN2P17655 700 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 ARFGAP3Q9NP61 516 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 TSC22D4Q9Y3Q8 395 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 RWDD3Q9Y3V2 267 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 CDC40O60508 579 aaKnown RBP eCLIP6.77□□□□□ -1.33
SCN2A-202ENST00000375427 PYGLP06737 847 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 GRAMD4Q6IC98 578 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 RPAP2Q8IXW5 612 aaPredicted RBP6.77□□□□□ -1.33
SCN2A-202ENST00000375427 LRRD1A4D1F6 860 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 GOLGA8BA8MQT2 603 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 HNRNPCL2B2RXH8 293 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 GOLGA8RI6L899 631 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 HNRNPCL1O60812 293 aaKnown RBP6.77□□□□□ -1.33
SCN2A-202ENST00000375427 INTS8Q75QN2 995 aaKnown RBP6.77□□□□□ -1.33
SCN2A-202ENST00000375427 TBC1D2Q9BYX2 928 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 NFKBIL1Q9UBC1 381 aaPredicted RBP6.77□□□□□ -1.33
SCN2A-202ENST00000375427 MICAL3Q7RTP6 2002 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 PPP1R15AO75807 674 aaPredicted RBP6.77□□□□□ -1.33
SCN2A-202ENST00000375427 TEKT2Q9UIF3 430 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 RASSF2P50749 326 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 SART3Q15020 963 aaKnown RBP6.77□□□□□ -1.33
SCN2A-202ENST00000375427 AFAP1Q8N556 730 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 CCDC77Q9BR77 488 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 NOL7Q9UMY1 257 aaKnown RBP6.77□□□□□ -1.33
SCN2A-202ENST00000375427 ANGPTL3Q9Y5C1 460 aa6.77□□□□□ -1.33
SCN2A-202ENST00000375427 CCDC62Q6P9F0 684 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 KIAA2013Q8IYS2 634 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 AFAP1L2Q8N4X5 818 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 MPHOSPH8Q99549 860 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 VPS37AQ8NEZ2 397 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 ZNF396Q96N95 335 aaPredicted RBP6.76□□□□□ -1.33
SCN2A-202ENST00000375427 GMEB1Q9Y692 573 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 BZW2Q9Y6E2 419 aaKnown RBP6.76□□□□□ -1.33
SCN2A-202ENST00000375427 ATP2A1O14983 1001 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 HNRNPCP07910 306 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCN2A-202ENST00000375427 CUL4BQ13620 913 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 CTTNQ14247 550 aaKnown RBP6.76□□□□□ -1.33
SCN2A-202ENST00000375427 NECAB1Q8N987 351 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 CCDC150Q8NCX0 1101 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 ZHX3Q9H4I2 956 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 YY1AP1Q9H869 796 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 ELL2O00472 640 aaPredicted RBP6.76□□□□□ -1.33
SCN2A-202ENST00000375427 MUM1Q2TAK8 710 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 TTC16Q8NEE8 873 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 MCUR1Q96AQ8 359 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 PPP1R9AQ9ULJ8 1098 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 MIS12Q9H081 205 aa6.76□□□□□ -1.33
SCN2A-202ENST00000375427 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.76□□□□□ -1.33
SCN2A-202ENST00000375427 MBD2Q9UBB5 411 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 CCDC180Q9P1Z9 1646 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 KRT73Q86Y46 540 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 CCT6BQ92526 530 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 SYNCQ9H7C4 482 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 CNGB3Q9NQW8 809 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 GOLGA8AA7E2F4 631 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 BZW1Q7L1Q6 419 aaKnown RBP6.75□□□□□ -1.33
SCN2A-202ENST00000375427 RASAL2Q9UJF2 1139 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 CCDC15Q0P6D6 951 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 ZKSCAN8Q15776 578 aaPredicted RBP6.75□□□□□ -1.33
SCN2A-202ENST00000375427 RASIP1Q5U651 963 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 ATF7IPQ6VMQ6 1270 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 ANKRD12Q6UB98 2062 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 EIF3DO15371 548 aaKnown RBP eCLIP6.75□□□□□ -1.33
SCN2A-202ENST00000375427 CSB-PGBD3P0DP91 1061 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 MCCD1P59942 119 aaPredicted RBP6.75□□□□□ -1.33
SCN2A-202ENST00000375427 MRPS15P82914 257 aaKnown RBP6.75□□□□□ -1.33
SCN2A-202ENST00000375427 ARHGAP44Q17R89 818 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 KCTD17Q8N5Z5 321 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 KDM2AQ9Y2K7 1162 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 SFPQP23246 707 aaKnown RBP eCLIP6.75□□□□□ -1.33
SCN2A-202ENST00000375427 SP100P23497 879 aaPredicted RBP6.75□□□□□ -1.33
SCN2A-202ENST00000375427 KRT72Q14CN4 511 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 ISM2Q6H9L7 571 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 SDCCAG3Q96C92 435 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 IQCDQ96DY2 449 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 ANO2Q9NQ90 1003 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 CCDC171Q6TFL3 1326 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 KRT6AP02538 564 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 KRT6BP04259 564 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 KRT6CP48668 564 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 KRT77Q7Z794 578 aa6.75□□□□□ -1.33
SCN2A-202ENST00000375427 DNAJC17Q9NVM6 304 aaKnown RBP6.75□□□□□ -1.33
SCN2A-202ENST00000375427 FOSL1P15407 271 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 G3BP1Q13283 466 aaKnown RBP eCLIP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 NFKBIBQ15653 356 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 RILPL2Q969X0 211 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 RIOK1Q9BRS2 568 aaKnown RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 HDAC9Q9UKV0 1011 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 ZNF777Q9ULD5 760 aaPredicted RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 KRT10P13645 584 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 MAP3K10Q02779 954 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 DENND2CQ68D51 928 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 ZSCAN30Q86W11 494 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 HAUS1Q96CS2 278 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 PHBP35232 272 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 PHLDB3Q6NSJ2 640 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 CCDC82Q8N4S0 544 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms