RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 SUPT20HQ8NEM7 779 aa13.74□□□□□ -0.21
HLA-DRA-201ENST00000374982 CDCA5Q96FF9 252 aa13.74□□□□□ -0.21
HLA-DRA-201ENST00000374982 RBM17Q96I25 401 aaKnown RBP13.74□□□□□ -0.21
HLA-DRA-201ENST00000374982 RTFDC1Q9BY42 306 aaPredicted RBP13.74□□□□□ -0.21
HLA-DRA-201ENST00000374982 USP16Q9Y5T5 823 aa13.74□□□□□ -0.21
HLA-DRA-201ENST00000374982 CENPFP49454 3210 aa13.73□□□□□ -0.21
HLA-DRA-201ENST00000374982 RGL2O15211 777 aa13.73□□□□□ -0.21
HLA-DRA-201ENST00000374982 TM4SF4P48230 202 aa13.73□□□□□ -0.21
HLA-DRA-201ENST00000374982 KIAA2012Q0VF49 1180 aa13.73□□□□□ -0.21
HLA-DRA-201ENST00000374982 HLFQ16534 295 aa13.73□□□□□ -0.21
HLA-DRA-201ENST00000374982 OTOP1Q7RTM1 612 aa13.73□□□□□ -0.21
HLA-DRA-201ENST00000374982 DPF2Q92785 391 aa13.73□□□□□ -0.21
HLA-DRA-201ENST00000374982 TEFQ10587 303 aa13.72□□□□□ -0.21
HLA-DRA-201ENST00000374982 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
HLA-DRA-201ENST00000374982 SULF1Q8IWU6 871 aa13.72□□□□□ -0.21
HLA-DRA-201ENST00000374982 CFHR5Q9BXR6 569 aa13.72□□□□□ -0.21
HLA-DRA-201ENST00000374982 NYXQ9GZU5 481 aa13.72□□□□□ -0.21
HLA-DRA-201ENST00000374982 GGA3Q9NZ52 723 aa13.72□□□□□ -0.21
HLA-DRA-201ENST00000374982 ATP6V0A2Q9Y487 856 aa13.72□□□□□ -0.21
HLA-DRA-201ENST00000374982 HMOX1P09601 288 aa13.71□□□□□ -0.21
HLA-DRA-201ENST00000374982 ARMC5Q96C12 935 aa13.71□□□□□ -0.21
HLA-DRA-201ENST00000374982 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.21
HLA-DRA-201ENST00000374982 LAMB2P55268 1798 aa13.71□□□□□ -0.22
HLA-DRA-201ENST00000374982 DUOX1Q9NRD9 1551 aa13.71□□□□□ -0.22
HLA-DRA-201ENST00000374982 DDX60Q8IY21 1712 aaKnown RBP13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 CEP290O15078 2479 aa13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 ASTN2O75129 1339 aaPredicted RBP13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 PSMD14O00487 310 aa13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 KCNQ3O43525 872 aa13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 FKBP1BP68106 108 aa13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 DPP8Q6V1X1 898 aaPredicted RBP13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 MOB2Q70IA6 237 aa13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 PTPN22Q9Y2R2 807 aa13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 A0A0C4DFX4 3053 aa13.7□□□□□ -0.22
HLA-DRA-201ENST00000374982 KDM3BQ7LBC6 1761 aa13.69□□□□□ -0.22
HLA-DRA-201ENST00000374982 MKRN3Q13064 507 aaKnown RBP13.69□□□□□ -0.22
HLA-DRA-201ENST00000374982 KIF4BQ2VIQ3 1234 aa13.69□□□□□ -0.22
HLA-DRA-201ENST00000374982 IL17REQ8NFR9 667 aa13.69□□□□□ -0.22
HLA-DRA-201ENST00000374982 TMEM106CQ9BVX2 250 aa13.69□□□□□ -0.22
HLA-DRA-201ENST00000374982 COL25A1Q9BXS0 654 aaPredicted RBP13.69□□□□□ -0.22
HLA-DRA-201ENST00000374982 TAF1P21675 1872 aa13.67□□□□□ -0.22
HLA-DRA-201ENST00000374982 ZNF609O15014 1411 aa13.67□□□□□ -0.22
HLA-DRA-201ENST00000374982 NBPF26B4DH59 902 aa13.67□□□□□ -0.22
HLA-DRA-201ENST00000374982 UBE2Q2LH0YL09 131 aa13.67□□□□□ -0.22
HLA-DRA-201ENST00000374982 SREBF2Q12772 1141 aa13.67□□□□□ -0.22
HLA-DRA-201ENST00000374982 NBPF10Q6P3W6 841 aaKnown RBP13.67□□□□□ -0.22
HLA-DRA-201ENST00000374982 MPNDQ8N594 471 aa13.67□□□□□ -0.22
HLA-DRA-201ENST00000374982 IBTKQ9P2D0 1353 aaPredicted RBP13.67□□□□□ -0.22
HLA-DRA-201ENST00000374982 LRRC37AA6NMS7 1700 aa13.67□□□□□ -0.22
HLA-DRA-201ENST00000374982 LAMB4A4D0S4 1761 aa13.66□□□□□ -0.22
HLA-DRA-201ENST00000374982 LAMB1P07942 1786 aa13.66□□□□□ -0.22
HLA-DRA-201ENST00000374982 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
HLA-DRA-201ENST00000374982 PRO3102Q9H379 93 aa13.66□□□□□ -0.22
HLA-DRA-201ENST00000374982 ABCC4O15439 1325 aa13.65□□□□□ -0.22
HLA-DRA-201ENST00000374982 UBN2Q6ZU65 1347 aa13.65□□□□□ -0.22
HLA-DRA-201ENST00000374982 SOX1O00570 391 aaPredicted RBP13.65□□□□□ -0.22
HLA-DRA-201ENST00000374982 RPS12P25398 132 aaKnown RBP13.65□□□□□ -0.22
HLA-DRA-201ENST00000374982 ANGEL2Q5VTE6 544 aaKnown RBP13.65□□□□□ -0.22
HLA-DRA-201ENST00000374982 ZNF333Q96JL9 665 aa13.65□□□□□ -0.22
HLA-DRA-201ENST00000374982 SCN9AQ15858 1988 aa13.65□□□□□ -0.22
HLA-DRA-201ENST00000374982 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
HLA-DRA-201ENST00000374982 SUSD4Q5VX71 490 aa13.64□□□□□ -0.23
HLA-DRA-201ENST00000374982 SP8Q8IXZ3 490 aa13.64□□□□□ -0.23
HLA-DRA-201ENST00000374982 LRCH3Q96II8 777 aa13.64□□□□□ -0.23
HLA-DRA-201ENST00000374982 RANBP2P49792 3224 aaKnown RBP13.63□□□□□ -0.23
HLA-DRA-201ENST00000374982 RTL9Q8NET4 1388 aa13.63□□□□□ -0.23
HLA-DRA-201ENST00000374982 GNAT3A8MTJ3 354 aa13.63□□□□□ -0.23
HLA-DRA-201ENST00000374982 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
HLA-DRA-201ENST00000374982 GPTP24298 496 aa13.63□□□□□ -0.23
HLA-DRA-201ENST00000374982 CD99L2Q8TCZ2 262 aa13.63□□□□□ -0.23
HLA-DRA-201ENST00000374982 DBNDD1Q9H9R9 158 aa13.63□□□□□ -0.23
HLA-DRA-201ENST00000374982 KCNQ5Q9NR82 932 aa13.63□□□□□ -0.23
HLA-DRA-201ENST00000374982 CEMIPQ8WUJ3 1361 aa13.62□□□□□ -0.23
HLA-DRA-201ENST00000374982 NTSR2O95665 410 aa13.62□□□□□ -0.23
HLA-DRA-201ENST00000374982 ALDH1A1P00352 501 aa13.62□□□□□ -0.23
HLA-DRA-201ENST00000374982 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
HLA-DRA-201ENST00000374982 MORC1Q86VD1 984 aa13.62□□□□□ -0.23
HLA-DRA-201ENST00000374982 ERO1AQ96HE7 468 aa13.62□□□□□ -0.23
HLA-DRA-201ENST00000374982 NLRP3Q96P20 1036 aa13.62□□□□□ -0.23
HLA-DRA-201ENST00000374982 SCAF8Q9UPN6 1271 aaKnown RBP13.62□□□□□ -0.23
HLA-DRA-201ENST00000374982 SCARF1Q14162 830 aa13.61□□□□□ -0.23
HLA-DRA-201ENST00000374982 TTLL12Q14166 644 aaPredicted RBP13.61□□□□□ -0.23
HLA-DRA-201ENST00000374982 DPF3Q92784 378 aa13.61□□□□□ -0.23
HLA-DRA-201ENST00000374982 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
HLA-DRA-201ENST00000374982 PSME4Q14997 1843 aa13.6□□□□□ -0.23
HLA-DRA-201ENST00000374982 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
HLA-DRA-201ENST00000374982 BBOX1O75936 387 aa13.6□□□□□ -0.23
HLA-DRA-201ENST00000374982 CAP1Q01518 475 aa13.6□□□□□ -0.23
HLA-DRA-201ENST00000374982 PRAMEF18Q5VWM3 479 aa13.6□□□□□ -0.23
HLA-DRA-201ENST00000374982 MAP3K15Q6ZN16 1313 aa13.6□□□□□ -0.23
HLA-DRA-201ENST00000374982 ECE2O60344 883 aa13.59□□□□□ -0.23
HLA-DRA-201ENST00000374982 WASHC4Q2M389 1173 aa13.59□□□□□ -0.23
HLA-DRA-201ENST00000374982 IFNL1Q8IU54 200 aa13.59□□□□□ -0.23
HLA-DRA-201ENST00000374982 NGEFQ8N5V2 710 aa13.59□□□□□ -0.23
HLA-DRA-201ENST00000374982 WTIPA6NIX2 430 aaPredicted RBP13.58□□□□□ -0.24
HLA-DRA-201ENST00000374982 RIMBP2O15034 1052 aa13.58□□□□□ -0.24
HLA-DRA-201ENST00000374982 MYCP01106 439 aaPredicted RBP13.58□□□□□ -0.24
HLA-DRA-201ENST00000374982 TCIRG1Q13488 830 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms