RNA–Protein interactions for RNA: ENST00000374945.1

LINC01993-201, Transcript of long intergenic non-protein coding RNA 1993, humanhuman

TSL 2 BASIC

Gene LINC01993, Length 2,934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01993-201ENST00000374945 PPP1R42Q7Z4L9 355 aa15.41■□□□□ 0.06
LINC01993-201ENST00000374945 NUTM1Q86Y26 1132 aa15.41■□□□□ 0.06
LINC01993-201ENST00000374945 SPG7Q9UQ90 795 aa15.41■□□□□ 0.06
LINC01993-201ENST00000374945 USP16Q9Y5T5 823 aa15.41■□□□□ 0.06
LINC01993-201ENST00000374945 COL18A1P39060 1754 aa15.41■□□□□ 0.06
LINC01993-201ENST00000374945 LARP1Q6PKG0 1096 aaKnown RBP15.41■□□□□ 0.06
LINC01993-201ENST00000374945 IFNL2Q8IZJ0 200 aa15.41■□□□□ 0.06
LINC01993-201ENST00000374945 FAM53CQ9NYF3 392 aa15.41■□□□□ 0.06
LINC01993-201ENST00000374945 SOS1Q07889 1333 aaPredicted RBP15.41■□□□□ 0.06
LINC01993-201ENST00000374945 TERF2Q15554 542 aa15.4■□□□□ 0.06
LINC01993-201ENST00000374945 CAMK4Q16566 473 aa15.4■□□□□ 0.06
LINC01993-201ENST00000374945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.4■□□□□ 0.06
LINC01993-201ENST00000374945 CCDC112Q8NEF3 446 aa15.4■□□□□ 0.06
LINC01993-201ENST00000374945 KAT6BQ8WYB5 2073 aa15.4■□□□□ 0.06
LINC01993-201ENST00000374945 SRGAP3O43295 1099 aa15.4■□□□□ 0.06
LINC01993-201ENST00000374945 CASTP20810 708 aaKnown RBP15.4■□□□□ 0.06
LINC01993-201ENST00000374945 ANO6Q4KMQ2 910 aa15.4■□□□□ 0.06
LINC01993-201ENST00000374945 TDRD7Q8NHU6 1098 aaKnown RBP15.4■□□□□ 0.06
LINC01993-201ENST00000374945 CACTINQ8WUQ7 758 aaKnown RBP15.4■□□□□ 0.06
LINC01993-201ENST00000374945 ELP1O95163 1332 aa15.4■□□□□ 0.06
LINC01993-201ENST00000374945 RBM43Q6ZSC3 357 aaKnown RBP15.4■□□□□ 0.06
LINC01993-201ENST00000374945 CAMTA1Q9Y6Y1 1673 aa15.4■□□□□ 0.06
LINC01993-201ENST00000374945 VPS37CA5D8V6 355 aaPredicted RBP15.39■□□□□ 0.05
LINC01993-201ENST00000374945 ZBTB22O15209 634 aa15.39■□□□□ 0.05
LINC01993-201ENST00000374945 CCDC144BQ3MJ40 725 aa15.39■□□□□ 0.05
LINC01993-201ENST00000374945 CCDC144CPQ8IYA2 1237 aa15.39■□□□□ 0.05
LINC01993-201ENST00000374945 SURF6O75683 361 aaKnown RBP15.39■□□□□ 0.05
LINC01993-201ENST00000374945 KMT5BQ4FZB7 885 aa15.39■□□□□ 0.05
LINC01993-201ENST00000374945 SOS2Q07890 1332 aaPredicted RBP15.39■□□□□ 0.05
LINC01993-201ENST00000374945 PDIA6Q15084 440 aa15.38■□□□□ 0.05
LINC01993-201ENST00000374945 ADCK5Q3MIX3 580 aa15.38■□□□□ 0.05
LINC01993-201ENST00000374945 CKAP2LQ8IYA6 745 aa15.38■□□□□ 0.05
LINC01993-201ENST00000374945 CCDC171Q6TFL3 1326 aa15.38■□□□□ 0.05
LINC01993-201ENST00000374945 VPS53Q5VIR6 699 aa15.38■□□□□ 0.05
LINC01993-201ENST00000374945 SSH3Q8TE77 659 aa15.38■□□□□ 0.05
LINC01993-201ENST00000374945 CACNA1FO60840 1977 aa15.38■□□□□ 0.05
LINC01993-201ENST00000374945 PTCD1O75127 700 aaKnown RBP15.37■□□□□ 0.05
LINC01993-201ENST00000374945 CABP4P57796 275 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 DRC7Q8IY82 874 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 ZNF397Q8NF99 534 aaPredicted RBP15.37■□□□□ 0.05
LINC01993-201ENST00000374945 TRIM5Q9C035 493 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 C9orf78Q9NZ63 289 aaPredicted RBP15.37■□□□□ 0.05
LINC01993-201ENST00000374945 PA2G4Q9UQ80 394 aaKnown RBP15.37■□□□□ 0.05
LINC01993-201ENST00000374945 CHMP3Q9Y3E7 222 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 PXDNLA1KZ92 1463 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 HOXB7P09629 217 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 ME3Q16798 604 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 TPD52L1Q16890 204 aaPredicted RBP15.37■□□□□ 0.05
LINC01993-201ENST00000374945 CDC37L1Q7L3B6 337 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 TTC5Q8N0Z6 440 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 KRT222Q8N1A0 295 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 SH2B1Q9NRF2 756 aaPredicted RBP15.37■□□□□ 0.05
LINC01993-201ENST00000374945 EVA1CP58658 441 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 KRT85P78386 507 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 CEP135Q66GS9 1140 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 FAM173BQ6P4H8 233 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 PDRG1Q9NUG6 133 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 DACT1Q9NYF0 836 aa15.37■□□□□ 0.05
LINC01993-201ENST00000374945 COPS6Q7L5N1 327 aa15.36■□□□□ 0.05
LINC01993-201ENST00000374945 XAGE3Q8WTP9 111 aa15.36■□□□□ 0.05
LINC01993-201ENST00000374945 KCNB2Q92953 911 aa15.36■□□□□ 0.05
LINC01993-201ENST00000374945 ZSCAN31Q96LW9 406 aaPredicted RBP15.36■□□□□ 0.05
LINC01993-201ENST00000374945 TNMDQ9H2S6 317 aa15.36■□□□□ 0.05
LINC01993-201ENST00000374945 ZSWIM6Q9HCJ5 1215 aa15.36■□□□□ 0.05
LINC01993-201ENST00000374945 USP27XA6NNY8 438 aa15.36■□□□□ 0.05
LINC01993-201ENST00000374945 CDC25BP30305 580 aa15.36■□□□□ 0.05
LINC01993-201ENST00000374945 CWC27Q6UX04 472 aaKnown RBP15.36■□□□□ 0.05
LINC01993-201ENST00000374945 CLSTN2Q9H4D0 955 aa15.36■□□□□ 0.05
LINC01993-201ENST00000374945 WDR17Q8IZU2 1322 aa15.36■□□□□ 0.05
LINC01993-201ENST00000374945 HEG1Q9ULI3 1381 aa15.36■□□□□ 0.05
LINC01993-201ENST00000374945 PTH1RQ03431 593 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 POLA2Q14181 598 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 NYAP1Q6ZVC0 841 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 CNTROBQ8N137 903 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 NECAB1Q8N987 351 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 DCAF5Q96JK2 942 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 JAKMIP1Q96N16 626 aaKnown RBP15.35■□□□□ 0.05
LINC01993-201ENST00000374945 CLIP2Q9UDT6 1046 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 ZNF215Q9UL58 517 aaPredicted RBP15.35■□□□□ 0.05
LINC01993-201ENST00000374945 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 RHPN1Q8TCX5 695 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 TM6SF1Q9BZW5 370 aa15.35■□□□□ 0.05
LINC01993-201ENST00000374945 RAB11FIP3O75154 756 aa15.34■□□□□ 0.05
LINC01993-201ENST00000374945 IRX5P78411 483 aaPredicted RBP15.34■□□□□ 0.05
LINC01993-201ENST00000374945 FERMT3Q86UX7 667 aa15.34■□□□□ 0.05
LINC01993-201ENST00000374945 KLHDC4Q8TBB5 520 aa15.34■□□□□ 0.05
LINC01993-201ENST00000374945 DDX19AQ9NUU7 478 aaKnown RBP15.34■□□□□ 0.05
LINC01993-201ENST00000374945 CPDO75976 1380 aa15.34■□□□□ 0.05
LINC01993-201ENST00000374945 RBM6P78332 1123 aaKnown RBP15.34■□□□□ 0.05
LINC01993-201ENST00000374945 FBXO38Q6PIJ6 1188 aa15.34■□□□□ 0.05
LINC01993-201ENST00000374945 ZCRB1Q8TBF4 217 aaKnown RBP15.34■□□□□ 0.05
LINC01993-201ENST00000374945 DDX21Q9NR30 783 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC01993-201ENST00000374945 C5P01031 1676 aa15.34■□□□□ 0.05
LINC01993-201ENST00000374945 ATP5J2-PTCD1G3V325 749 aa15.33■□□□□ 0.05
LINC01993-201ENST00000374945 DNAJC25Q9H1X3 360 aa15.33■□□□□ 0.05
LINC01993-201ENST00000374945 SIPA1L3O60292 1781 aaPredicted RBP15.33■□□□□ 0.05
LINC01993-201ENST00000374945 IGKV5-2P06315 115 aa15.33■□□□□ 0.04
LINC01993-201ENST00000374945 ARID5BQ14865 1188 aa15.33■□□□□ 0.04
LINC01993-201ENST00000374945 LARP1BQ659C4 914 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms