RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 DLK2Q6UY11 383 aa12.58□□□□□ -0.4
HLA-DOA-202ENST00000374813 SAMD7Q7Z3H4 446 aa12.58□□□□□ -0.4
HLA-DOA-202ENST00000374813 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
HLA-DOA-202ENST00000374813 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
HLA-DOA-202ENST00000374813 IBTKQ9P2D0 1353 aaPredicted RBP12.57□□□□□ -0.4
HLA-DOA-202ENST00000374813 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
HLA-DOA-202ENST00000374813 PPP1R42Q7Z4L9 355 aa12.57□□□□□ -0.4
HLA-DOA-202ENST00000374813 HTTP42858 3142 aa12.57□□□□□ -0.4
HLA-DOA-202ENST00000374813 CEP290O15078 2479 aa12.56□□□□□ -0.4
HLA-DOA-202ENST00000374813 NUP98P52948 1817 aa12.56□□□□□ -0.4
HLA-DOA-202ENST00000374813 GPR25O00155 361 aa12.56□□□□□ -0.4
HLA-DOA-202ENST00000374813 DLL1O00548 723 aa12.56□□□□□ -0.4
HLA-DOA-202ENST00000374813 TBC1D8O95759 1140 aa12.56□□□□□ -0.4
HLA-DOA-202ENST00000374813 TBC1D10BQ4KMP7 808 aaPredicted RBP12.56□□□□□ -0.4
HLA-DOA-202ENST00000374813 KIF6Q6ZMV9 814 aa12.56□□□□□ -0.4
HLA-DOA-202ENST00000374813 MAP3K15Q6ZN16 1313 aa12.56□□□□□ -0.4
HLA-DOA-202ENST00000374813 SHTN1A0MZ66 631 aa12.55□□□□□ -0.4
HLA-DOA-202ENST00000374813 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
HLA-DOA-202ENST00000374813 SUSD4Q5VX71 490 aa12.55□□□□□ -0.4
HLA-DOA-202ENST00000374813 RASAL3Q86YV0 1011 aa12.55□□□□□ -0.4
HLA-DOA-202ENST00000374813 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
HLA-DOA-202ENST00000374813 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
HLA-DOA-202ENST00000374813 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
HLA-DOA-202ENST00000374813 TRIOBPQ9H2D6 2365 aa12.54□□□□□ -0.4
HLA-DOA-202ENST00000374813 YDJCA8MPS7 323 aa12.54□□□□□ -0.4
HLA-DOA-202ENST00000374813 U2SURPO15042 1029 aaKnown RBP12.54□□□□□ -0.4
HLA-DOA-202ENST00000374813 FKTNO75072 461 aa12.54□□□□□ -0.4
HLA-DOA-202ENST00000374813 GPTP24298 496 aa12.54□□□□□ -0.4
HLA-DOA-202ENST00000374813 TM4SF4P48230 202 aa12.54□□□□□ -0.4
HLA-DOA-202ENST00000374813 SLC10A5Q5PT55 438 aa12.54□□□□□ -0.4
HLA-DOA-202ENST00000374813 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
HLA-DOA-202ENST00000374813 NGEFQ8N5V2 710 aa12.54□□□□□ -0.4
HLA-DOA-202ENST00000374813 COL6A3P12111 3177 aa12.53□□□□□ -0.4
HLA-DOA-202ENST00000374813 PSMD14O00487 310 aa12.53□□□□□ -0.4
HLA-DOA-202ENST00000374813 WASHC4Q2M389 1173 aa12.53□□□□□ -0.4
HLA-DOA-202ENST00000374813 PARP10Q53GL7 1025 aa12.53□□□□□ -0.4
HLA-DOA-202ENST00000374813 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
HLA-DOA-202ENST00000374813 TMC4Q7Z404 712 aa12.53□□□□□ -0.4
HLA-DOA-202ENST00000374813 SLC51AQ86UW1 340 aa12.53□□□□□ -0.4
HLA-DOA-202ENST00000374813 ZNF34Q8IZ26 560 aa12.53□□□□□ -0.4
HLA-DOA-202ENST00000374813 CDCA5Q96FF9 252 aa12.53□□□□□ -0.4
HLA-DOA-202ENST00000374813 ABCC4O15439 1325 aa12.53□□□□□ -0.4
HLA-DOA-202ENST00000374813 NTSR2O95665 410 aa12.52□□□□□ -0.41
HLA-DOA-202ENST00000374813 EGFRP00533 1210 aa12.52□□□□□ -0.41
HLA-DOA-202ENST00000374813 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.41
HLA-DOA-202ENST00000374813 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.41
HLA-DOA-202ENST00000374813 CFHR5Q9BXR6 569 aa12.52□□□□□ -0.41
HLA-DOA-202ENST00000374813 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
HLA-DOA-202ENST00000374813 UBN2Q6ZU65 1347 aa12.52□□□□□ -0.41
HLA-DOA-202ENST00000374813 RANBP2P49792 3224 aaKnown RBP12.52□□□□□ -0.41
HLA-DOA-202ENST00000374813 SREBF2Q12772 1141 aa12.51□□□□□ -0.41
HLA-DOA-202ENST00000374813 KIF4BQ2VIQ3 1234 aa12.51□□□□□ -0.41
HLA-DOA-202ENST00000374813 GIGYF2Q6Y7W6 1299 aaKnown RBP12.51□□□□□ -0.41
HLA-DOA-202ENST00000374813 SLC17A8Q8NDX2 589 aa12.51□□□□□ -0.41
HLA-DOA-202ENST00000374813 UTP14AQ9BVJ6 771 aaKnown RBP12.51□□□□□ -0.41
HLA-DOA-202ENST00000374813 GGA3Q9NZ52 723 aa12.51□□□□□ -0.41
HLA-DOA-202ENST00000374813 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
HLA-DOA-202ENST00000374813 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
HLA-DOA-202ENST00000374813 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
HLA-DOA-202ENST00000374813 EIF4G2P78344 907 aaKnown RBP eCLIP12.5□□□□□ -0.41
HLA-DOA-202ENST00000374813 TAF7Q15545 349 aaPredicted RBP12.5□□□□□ -0.41
HLA-DOA-202ENST00000374813 NECTIN2Q92692 538 aa12.5□□□□□ -0.41
HLA-DOA-202ENST00000374813 ZBTB3Q9H5J0 574 aa12.5□□□□□ -0.41
HLA-DOA-202ENST00000374813 RRP7AQ9Y3A4 280 aaKnown RBP12.5□□□□□ -0.41
HLA-DOA-202ENST00000374813 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
HLA-DOA-202ENST00000374813 GRAPQ13588 217 aa12.49□□□□□ -0.41
HLA-DOA-202ENST00000374813 TTLL7Q6ZT98 887 aa12.49□□□□□ -0.41
HLA-DOA-202ENST00000374813 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
HLA-DOA-202ENST00000374813 PHACTR3Q96KR7 559 aa12.49□□□□□ -0.41
HLA-DOA-202ENST00000374813 SCARF1Q14162 830 aa12.48□□□□□ -0.41
HLA-DOA-202ENST00000374813 MCM10Q7L590 875 aa12.48□□□□□ -0.41
HLA-DOA-202ENST00000374813 EYA3Q99504 573 aa12.48□□□□□ -0.41
HLA-DOA-202ENST00000374813 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
HLA-DOA-202ENST00000374813 TRIM17Q9Y577 477 aa12.48□□□□□ -0.41
HLA-DOA-202ENST00000374813 VIL1P09327 827 aaKnown RBP12.47□□□□□ -0.41
HLA-DOA-202ENST00000374813 MYL6BP14649 208 aa12.47□□□□□ -0.41
HLA-DOA-202ENST00000374813 PRKAR2BP31323 418 aa12.47□□□□□ -0.41
HLA-DOA-202ENST00000374813 INHBEP58166 350 aa12.47□□□□□ -0.41
HLA-DOA-202ENST00000374813 ANGEL2Q5VTE6 544 aaKnown RBP12.47□□□□□ -0.41
HLA-DOA-202ENST00000374813 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
HLA-DOA-202ENST00000374813 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
HLA-DOA-202ENST00000374813 PAPPA2Q9BXP8 1791 aa12.47□□□□□ -0.41
HLA-DOA-202ENST00000374813 PITPNM2Q9BZ72 1349 aa12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 UBE2Q2LH0YL09 131 aa12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 C6orf229H3BNL8 230 aa12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 ECE2O60344 883 aa12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 EN2P19622 333 aaPredicted RBP12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 TCIRG1Q13488 830 aa12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 TTLL12Q14166 644 aaPredicted RBP12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 OTOP1Q7RTM1 612 aa12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 AGBL3Q8NEM8 1001 aa12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
HLA-DOA-202ENST00000374813 ANKRD36CQ5JPF3 1778 aa12.46□□□□□ -0.42
HLA-DOA-202ENST00000374813 RBBP6Q7Z6E9 1792 aaKnown RBP12.46□□□□□ -0.42
HLA-DOA-202ENST00000374813 NF2P35240 595 aa12.45□□□□□ -0.42
HLA-DOA-202ENST00000374813 ZNF280AP59817 542 aaPredicted RBP12.45□□□□□ -0.42
HLA-DOA-202ENST00000374813 KCNQ5Q9NR82 932 aa12.45□□□□□ -0.42
HLA-DOA-202ENST00000374813 G3V3G9 751 aa12.44□□□□□ -0.42
HLA-DOA-202ENST00000374813 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms