RNA–Protein interactions for RNA: ENST00000374737.8

VSIG4-201, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG4, Length 1,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-201ENST00000374737 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
VSIG4-201ENST00000374737 GOLGB1Q14789 3259 aaKnown RBP11.3□□□□□ -0.6
VSIG4-201ENST00000374737 H0YIN7 160 aa11.3□□□□□ -0.6
VSIG4-201ENST00000374737 SRGAP3O43295 1099 aa11.3□□□□□ -0.6
VSIG4-201ENST00000374737 SF3B3Q15393 1217 aaKnown RBP11.3□□□□□ -0.6
VSIG4-201ENST00000374737 CCDC152Q4G0S7 254 aa11.3□□□□□ -0.6
VSIG4-201ENST00000374737 CEP85Q6P2H3 762 aa11.3□□□□□ -0.6
VSIG4-201ENST00000374737 KLHDC4Q8TBB5 520 aa11.3□□□□□ -0.6
VSIG4-201ENST00000374737 RPGRQ92834 1020 aaKnown RBP11.3□□□□□ -0.6
VSIG4-201ENST00000374737 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
VSIG4-201ENST00000374737 N4BP2Q86UW6 1770 aaPredicted RBP11.3□□□□□ -0.6
VSIG4-201ENST00000374737 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
VSIG4-201ENST00000374737 SRGNP10124 158 aa11.29□□□□□ -0.6
VSIG4-201ENST00000374737 DPEP1P16444 411 aa11.29□□□□□ -0.6
VSIG4-201ENST00000374737 ITGA6P23229 1130 aa11.29□□□□□ -0.6
VSIG4-201ENST00000374737 ATP8B2P98198 1209 aa11.29□□□□□ -0.6
VSIG4-201ENST00000374737 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
VSIG4-201ENST00000374737 RABL6Q3YEC7 729 aaPredicted RBP11.29□□□□□ -0.6
VSIG4-201ENST00000374737 SIRT2Q8IXJ6 389 aa11.29□□□□□ -0.6
VSIG4-201ENST00000374737 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
VSIG4-201ENST00000374737 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
VSIG4-201ENST00000374737 KLRG2A4D1S0 409 aaPredicted RBP11.28□□□□□ -0.6
VSIG4-201ENST00000374737 IFIT5Q13325 482 aaKnown RBP11.28□□□□□ -0.6
VSIG4-201ENST00000374737 CRY2Q49AN0 593 aa11.28□□□□□ -0.6
VSIG4-201ENST00000374737 C10orf71Q711Q0 1435 aa11.28□□□□□ -0.6
VSIG4-201ENST00000374737 DDX46Q7L014 1031 aaKnown RBP11.28□□□□□ -0.6
VSIG4-201ENST00000374737 DDX60Q8IY21 1712 aaKnown RBP11.28□□□□□ -0.6
VSIG4-201ENST00000374737 NLGN2Q8NFZ4 835 aa11.28□□□□□ -0.6
VSIG4-201ENST00000374737 CD2APQ9Y5K6 639 aa11.28□□□□□ -0.6
VSIG4-201ENST00000374737 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
VSIG4-201ENST00000374737 CELF1Q92879 486 aaKnown RBP11.28□□□□□ -0.6
VSIG4-201ENST00000374737 RBM17Q96I25 401 aaKnown RBP11.28□□□□□ -0.6
VSIG4-201ENST00000374737 PA2G4Q9UQ80 394 aaKnown RBP11.28□□□□□ -0.6
VSIG4-201ENST00000374737 ANKRD18BA2A2Z9 1011 aa11.27□□□□□ -0.61
VSIG4-201ENST00000374737 NPR1P16066 1061 aa11.27□□□□□ -0.61
VSIG4-201ENST00000374737 KCNA3P22001 575 aa11.27□□□□□ -0.61
VSIG4-201ENST00000374737 TGFB2P61812 414 aa11.27□□□□□ -0.61
VSIG4-201ENST00000374737 TAF7LQ5H9L4 462 aa11.27□□□□□ -0.61
VSIG4-201ENST00000374737 SLC51AQ86UW1 340 aa11.27□□□□□ -0.61
VSIG4-201ENST00000374737 RPAP2Q8IXW5 612 aaPredicted RBP11.27□□□□□ -0.61
VSIG4-201ENST00000374737 MASTLQ96GX5 879 aa11.27□□□□□ -0.61
VSIG4-201ENST00000374737 SYT17Q9BSW7 474 aa11.27□□□□□ -0.61
VSIG4-201ENST00000374737 SIL1Q9H173 461 aa11.27□□□□□ -0.61
VSIG4-201ENST00000374737 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
VSIG4-201ENST00000374737 ANKRD31Q8N7Z5 1873 aa11.26□□□□□ -0.61
VSIG4-201ENST00000374737 HOXA10P31260 410 aaPredicted RBP11.25□□□□□ -0.61
VSIG4-201ENST00000374737 RFX5P48382 616 aaPredicted RBP11.25□□□□□ -0.61
VSIG4-201ENST00000374737 RPS8P62241 208 aaKnown RBP11.25□□□□□ -0.61
VSIG4-201ENST00000374737 PTPN12Q05209 780 aaKnown RBP11.25□□□□□ -0.61
VSIG4-201ENST00000374737 MTX1Q13505 466 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 SSH3Q8TE77 659 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
VSIG4-201ENST00000374737 BCL11AQ9H165 835 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 RIC1Q4ADV7 1423 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 APBB1O00213 710 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 IGHDP01880 384 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 ALDH1B1P30837 517 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 GRAPQ13588 217 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 OLFM4Q6UX06 510 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 LDHAL6AQ6ZMR3 332 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
VSIG4-201ENST00000374737 GRAPLQ8TC17 118 aaPredicted RBP11.25□□□□□ -0.61
VSIG4-201ENST00000374737 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
VSIG4-201ENST00000374737 TAF1P21675 1872 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 COL4A1P02462 1669 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 LAMB2P55268 1798 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 SURF6O75683 361 aaKnown RBP11.24□□□□□ -0.61
VSIG4-201ENST00000374737 IGHMBP2P38935 993 aaKnown RBP11.24□□□□□ -0.61
VSIG4-201ENST00000374737 AAMPQ13685 434 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 POLA2Q14181 598 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 LRRC24Q50LG9 513 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 STYK1Q6J9G0 422 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 CRAMP1Q96RY5 1269 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 MPHOSPH8Q99549 860 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 PIM2Q9P1W9 311 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 EXOC6BQ9Y2D4 811 aa11.24□□□□□ -0.61
VSIG4-201ENST00000374737 HMMRO75330 724 aa11.23□□□□□ -0.61
VSIG4-201ENST00000374737 PRPF40BQ6NWY9 871 aaKnown RBP11.23□□□□□ -0.61
VSIG4-201ENST00000374737 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
VSIG4-201ENST00000374737 CNKSR1Q969H4 720 aa11.23□□□□□ -0.61
VSIG4-201ENST00000374737 CNNM1Q9NRU3 951 aa11.23□□□□□ -0.61
VSIG4-201ENST00000374737 PDZRN3Q9UPQ7 1066 aa11.23□□□□□ -0.61
VSIG4-201ENST00000374737 PPEF1O14829 653 aaPredicted RBP11.23□□□□□ -0.61
VSIG4-201ENST00000374737 C21orf2O43822 256 aa11.23□□□□□ -0.61
VSIG4-201ENST00000374737 BBOX1O75936 387 aa11.23□□□□□ -0.61
VSIG4-201ENST00000374737 HELBQ8NG08 1087 aaPredicted RBP11.23□□□□□ -0.61
VSIG4-201ENST00000374737 BCS1LQ9Y276 419 aa11.23□□□□□ -0.61
VSIG4-201ENST00000374737 RTL9Q8NET4 1388 aa11.23□□□□□ -0.61
VSIG4-201ENST00000374737 COL11A2P13942 1736 aaPredicted RBP11.23□□□□□ -0.61
VSIG4-201ENST00000374737 MYH3P11055 1940 aa11.23□□□□□ -0.61
VSIG4-201ENST00000374737 UTRNP46939 3433 aa11.22□□□□□ -0.61
VSIG4-201ENST00000374737 OS9Q13438 667 aaPredicted RBP11.22□□□□□ -0.61
VSIG4-201ENST00000374737 DALRD3Q5D0E6 543 aaKnown RBP11.22□□□□□ -0.61
VSIG4-201ENST00000374737 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
VSIG4-201ENST00000374737 RWDD1Q9H446 243 aaPredicted RBP11.22□□□□□ -0.61
VSIG4-201ENST00000374737 COPRSQ9NQ92 184 aa11.22□□□□□ -0.61
VSIG4-201ENST00000374737 BSDC1Q9NW68 430 aaPredicted RBP11.22□□□□□ -0.61
VSIG4-201ENST00000374737 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
VSIG4-201ENST00000374737 EYA2O00167 538 aa11.21□□□□□ -0.61
VSIG4-201ENST00000374737 TAF5LO75529 589 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms