RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 PDRG1Q9NUG6 133 aa21.94■■□□□ 1.1
RXRB-202ENST00000374685 TBC1D2BQ9UPU7 963 aa21.94■■□□□ 1.1
RXRB-202ENST00000374685 KCPQ6ZWJ8 1503 aa21.94■■□□□ 1.1
RXRB-202ENST00000374685 STARD3NLO95772 234 aa21.94■■□□□ 1.1
RXRB-202ENST00000374685 ERBB4Q15303 1308 aa21.94■■□□□ 1.1
RXRB-202ENST00000374685 CUL4AQ13619 759 aa21.93■■□□□ 1.1
RXRB-202ENST00000374685 NECAB1Q8N987 351 aa21.93■■□□□ 1.1
RXRB-202ENST00000374685 SNRKQ9NRH2 765 aa21.93■■□□□ 1.1
RXRB-202ENST00000374685 RBM27Q9P2N5 1060 aaKnown RBP21.93■■□□□ 1.1
RXRB-202ENST00000374685 CCDC57Q2TAC2 916 aa21.93■■□□□ 1.1
RXRB-202ENST00000374685 ATG9AQ7Z3C6 839 aa21.93■■□□□ 1.1
RXRB-202ENST00000374685 CYP46A1Q9Y6A2 500 aa21.93■■□□□ 1.1
RXRB-202ENST00000374685 GLI3P10071 1580 aa21.92■■□□□ 1.1
RXRB-202ENST00000374685 SKOR2Q2VWA4 1001 aaPredicted RBP21.92■■□□□ 1.1
RXRB-202ENST00000374685 SLC4A9Q96Q91 983 aa21.92■■□□□ 1.1
RXRB-202ENST00000374685 ZBTB1Q9Y2K1 713 aa21.92■■□□□ 1.1
RXRB-202ENST00000374685 TCIRG1Q13488 830 aa21.92■■□□□ 1.1
RXRB-202ENST00000374685 ATP5JP18859 108 aa21.91■■□□□ 1.1
RXRB-202ENST00000374685 TTC14Q96N46 770 aa21.91■■□□□ 1.1
RXRB-202ENST00000374685 LMBRD1Q9NUN5 540 aa21.91■■□□□ 1.1
RXRB-202ENST00000374685 LIMCH1Q9UPQ0 1083 aa21.91■■□□□ 1.1
RXRB-202ENST00000374685 HIP1O00291 1037 aa21.91■■□□□ 1.1
RXRB-202ENST00000374685 SLC27A2O14975 620 aa21.9■■□□□ 1.1
RXRB-202ENST00000374685 NECTIN1Q15223 517 aa21.9■■□□□ 1.1
RXRB-202ENST00000374685 GORABQ5T7V8 394 aa21.9■■□□□ 1.1
RXRB-202ENST00000374685 FKBP4Q02790 459 aaKnown RBP eCLIP21.9■■□□□ 1.1
RXRB-202ENST00000374685 ABCA3Q99758 1704 aa21.9■■□□□ 1.1
RXRB-202ENST00000374685 STK3Q13188 491 aa21.89■■□□□ 1.1
RXRB-202ENST00000374685 A0A1B0GUL7 405 aa21.89■■□□□ 1.09
RXRB-202ENST00000374685 MAP4K1Q92918 833 aa21.89■■□□□ 1.09
RXRB-202ENST00000374685 GRPEL1Q9HAV7 217 aa21.89■■□□□ 1.09
RXRB-202ENST00000374685 EYA2O00167 538 aa21.88■■□□□ 1.09
RXRB-202ENST00000374685 PDCL3Q9H2J4 239 aa21.88■■□□□ 1.09
RXRB-202ENST00000374685 NSFL1CQ9UNZ2 370 aaKnown RBP21.88■■□□□ 1.09
RXRB-202ENST00000374685 SMC3Q9UQE7 1217 aa21.88■■□□□ 1.09
RXRB-202ENST00000374685 BRD1O95696 1058 aa21.88■■□□□ 1.09
RXRB-202ENST00000374685 IL15P40933 162 aaPredicted RBP21.87■■□□□ 1.09
RXRB-202ENST00000374685 KLHL40Q2TBA0 621 aa21.87■■□□□ 1.09
RXRB-202ENST00000374685 INTS4Q96HW7 963 aaKnown RBP21.87■■□□□ 1.09
RXRB-202ENST00000374685 CEP126Q9P2H0 1117 aa21.87■■□□□ 1.09
RXRB-202ENST00000374685 TPM2P07951 284 aa21.87■■□□□ 1.09
RXRB-202ENST00000374685 ADORA1P30542 326 aa21.87■■□□□ 1.09
RXRB-202ENST00000374685 HSP90AB3PQ58FF7 597 aa21.87■■□□□ 1.09
RXRB-202ENST00000374685 ISCA1Q9BUE6 129 aa21.87■■□□□ 1.09
RXRB-202ENST00000374685 IFIT1P09914 478 aaKnown RBP21.86■■□□□ 1.09
RXRB-202ENST00000374685 GPT2Q8TD30 523 aa21.86■■□□□ 1.09
RXRB-202ENST00000374685 LRRC2Q9BYS8 371 aa21.86■■□□□ 1.09
RXRB-202ENST00000374685 PLEKHG2Q9H7P9 1386 aa21.86■■□□□ 1.09
RXRB-202ENST00000374685 LAMB4A4D0S4 1761 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 TOGARAM1Q9Y4F4 1720 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 TAF5LO75529 589 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 PTMSP20962 102 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 BLOC1S2Q6QNY1 142 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 CLEC17AQ6ZS10 378 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 HAUS7Q99871 368 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 PAG1Q9NWQ8 432 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 TNS2Q63HR2 1409 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 EPB41L2O43491 1005 aaKnown RBP21.85■■□□□ 1.09
RXRB-202ENST00000374685 ME3Q16798 604 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 ZSWIM6Q9HCJ5 1215 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 TRMT112Q9UI30 125 aaKnown RBP21.85■■□□□ 1.09
RXRB-202ENST00000374685 SHANK3Q9BYB0 1731 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 COL15A1P39059 1388 aa21.85■■□□□ 1.09
RXRB-202ENST00000374685 IFIT5Q13325 482 aaKnown RBP21.84■■□□□ 1.09
RXRB-202ENST00000374685 RNF20Q5VTR2 975 aa21.84■■□□□ 1.09
RXRB-202ENST00000374685 TEX13AQ9BXU3 409 aaPredicted RBP21.84■■□□□ 1.09
RXRB-202ENST00000374685 CYP19A1P11511 503 aaPredicted RBP21.84■■□□□ 1.09
RXRB-202ENST00000374685 VPS53Q5VIR6 699 aa21.84■■□□□ 1.09
RXRB-202ENST00000374685 PI16Q6UXB8 463 aa21.84■■□□□ 1.09
RXRB-202ENST00000374685 TPCN1Q9ULQ1 816 aa21.84■■□□□ 1.09
RXRB-202ENST00000374685 VPS37CA5D8V6 355 aaPredicted RBP21.84■■□□□ 1.09
RXRB-202ENST00000374685 MRE11P49959 708 aa21.84■■□□□ 1.09
RXRB-202ENST00000374685 DDB1Q16531 1140 aa21.84■■□□□ 1.09
RXRB-202ENST00000374685 MAP3K15Q6ZN16 1313 aa21.83■■□□□ 1.09
RXRB-202ENST00000374685 GJB2P29033 226 aa21.83■■□□□ 1.09
RXRB-202ENST00000374685 GREM2Q9H772 168 aa21.83■■□□□ 1.09
RXRB-202ENST00000374685 ZNF609O15014 1411 aa21.83■■□□□ 1.09
RXRB-202ENST00000374685 NHSL1Q5SYE7 1610 aa21.82■■□□□ 1.08
RXRB-202ENST00000374685 SYT1P21579 422 aa21.82■■□□□ 1.08
RXRB-202ENST00000374685 KCNQ4P56696 695 aa21.82■■□□□ 1.08
RXRB-202ENST00000374685 GIGYF2Q6Y7W6 1299 aaKnown RBP21.82■■□□□ 1.08
RXRB-202ENST00000374685 DZIP3Q86Y13 1208 aaKnown RBP21.82■■□□□ 1.08
RXRB-202ENST00000374685 PPFIA3O75145 1194 aa21.82■■□□□ 1.08
RXRB-202ENST00000374685 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.82■■□□□ 1.08
RXRB-202ENST00000374685 MED23Q9ULK4 1368 aa21.82■■□□□ 1.08
RXRB-202ENST00000374685 A0A0G2JLW4 131 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 FGD1P98174 961 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 MCMDC2Q4G0Z9 681 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 TTC39AQ5SRH9 613 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 LDHAL6AQ6ZMR3 332 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 NLRP10Q86W26 655 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 KBTBD3Q8NAB2 608 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 ZBTB38Q8NAP3 1195 aaPredicted RBP21.81■■□□□ 1.08
RXRB-202ENST00000374685 NAP1L2Q9ULW6 460 aaPredicted RBP21.81■■□□□ 1.08
RXRB-202ENST00000374685 WDR33Q9C0J8 1336 aaKnown RBP21.81■■□□□ 1.08
RXRB-202ENST00000374685 ESPNB1AK53 854 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 ZSCAN23Q3MJ62 389 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 METTL24Q5JXM2 366 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 IL17RAQ96F46 866 aa21.81■■□□□ 1.08
RXRB-202ENST00000374685 CNNM1Q9NRU3 951 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms