RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 REXO1L1PQ8IX06 675 aa15.14■□□□□ 0.01
PRPF4-201ENST00000374198 NR1I2O75469 434 aa15.14■□□□□ 0.01
PRPF4-201ENST00000374198 SEC31AO94979 1220 aaKnown RBP15.14■□□□□ 0.01
PRPF4-201ENST00000374198 SMC1AQ14683 1233 aaKnown RBP15.14■□□□□ 0.01
PRPF4-201ENST00000374198 PPP1R13BQ96KQ4 1090 aa15.14■□□□□ 0.01
PRPF4-201ENST00000374198 ZSCAN31Q96LW9 406 aaPredicted RBP15.14■□□□□ 0.01
PRPF4-201ENST00000374198 PRAM1Q96QH2 718 aa15.14■□□□□ 0.01
PRPF4-201ENST00000374198 SH2B1Q9NRF2 756 aaPredicted RBP15.14■□□□□ 0.01
PRPF4-201ENST00000374198 A0A1B0GUL7 405 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 TUBB4AP04350 444 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 CPA1P15085 419 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 HAP1P54257 671 aaPredicted RBP15.13■□□□□ 0.01
PRPF4-201ENST00000374198 GSDMDP57764 484 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 LARP1BQ659C4 914 aaKnown RBP15.13■□□□□ 0.01
PRPF4-201ENST00000374198 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 IQUBQ8NA54 791 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 SPATA32Q96LK8 384 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 TERF2IPQ9NYB0 399 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 PSD3Q9NYI0 1048 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 CDK12Q9NYV4 1490 aaPredicted RBP15.13■□□□□ 0.01
PRPF4-201ENST00000374198 SGSM2O43147 1006 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 SASH3O75995 380 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 TBC1D8O95759 1140 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 EXOC4Q96A65 974 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 JRKLQ9Y4A0 524 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 NOM1Q5C9Z4 860 aaKnown RBP15.13■□□□□ 0.01
PRPF4-201ENST00000374198 CDC37L1Q7L3B6 337 aa15.13■□□□□ 0.01
PRPF4-201ENST00000374198 LSG1Q9H089 658 aaKnown RBP15.13■□□□□ 0.01
PRPF4-201ENST00000374198 PLEKHG2Q9H7P9 1386 aa15.12■□□□□ 0.01
PRPF4-201ENST00000374198 MST1RQ04912 1400 aa15.12■□□□□ 0.01
PRPF4-201ENST00000374198 PSDA5PKW4 1024 aaPredicted RBP15.12■□□□□ 0.01
PRPF4-201ENST00000374198 FAM83GA6ND36 823 aa15.12■□□□□ 0.01
PRPF4-201ENST00000374198 ST3GAL1Q11201 340 aa15.12■□□□□ 0.01
PRPF4-201ENST00000374198 BRINP3Q76B58 766 aa15.12■□□□□ 0.01
PRPF4-201ENST00000374198 LEO1Q8WVC0 666 aaPredicted RBP15.12■□□□□ 0.01
PRPF4-201ENST00000374198 SYTL4Q96C24 671 aaPredicted RBP15.12■□□□□ 0.01
PRPF4-201ENST00000374198 VPS53Q5VIR6 699 aa15.12■□□□□ 0.01
PRPF4-201ENST00000374198 C11orf57Q6ZUT1 292 aaPredicted RBP15.12■□□□□ 0.01
PRPF4-201ENST00000374198 AOX1Q06278 1338 aa15.12■□□□□ 0.01
PRPF4-201ENST00000374198 CD163L1Q9NR16 1453 aa15.11■□□□□ 0.01
PRPF4-201ENST00000374198 NUTM2FA1L443 756 aa15.11■□□□□ 0.01
PRPF4-201ENST00000374198 TPM1P09493 284 aa15.11■□□□□ 0.01
PRPF4-201ENST00000374198 GORABQ5T7V8 394 aa15.11■□□□□ 0.01
PRPF4-201ENST00000374198 PDRG1Q9NUG6 133 aa15.11■□□□□ 0.01
PRPF4-201ENST00000374198 TFIP11Q9UBB9 837 aaKnown RBP15.11■□□□□ 0.01
PRPF4-201ENST00000374198 CLGNO14967 610 aa15.11■□□□□ 0.01
PRPF4-201ENST00000374198 GNAI2P04899 355 aa15.11■□□□□ 0.01
PRPF4-201ENST00000374198 ACTN2P35609 894 aa15.11■□□□□ 0.01
PRPF4-201ENST00000374198 TTC31Q49AM3 519 aaPredicted RBP15.11■□□□□ 0.01
PRPF4-201ENST00000374198 CCDC158Q5M9N0 1113 aa15.11■□□□□ 0.01
PRPF4-201ENST00000374198 OSBPL5Q9H0X9 879 aaPredicted RBP15.11■□□□□ 0.01
PRPF4-201ENST00000374198 ADAM21Q9UKJ8 722 aa15.11■□□□□ 0.01
PRPF4-201ENST00000374198 TADA3O75528 432 aa15.1■□□□□ 0.01
PRPF4-201ENST00000374198 BICD2Q8TD16 824 aa15.1■□□□□ 0.01
PRPF4-201ENST00000374198 BECN2A8MW95 431 aa15.1■□□□□ 0.01
PRPF4-201ENST00000374198 MAGEA9P43362 315 aa15.1■□□□□ 0.01
PRPF4-201ENST00000374198 LMAN1P49257 510 aa15.1■□□□□ 0.01
PRPF4-201ENST00000374198 DCTN1Q14203 1278 aa15.1■□□□□ 0.01
PRPF4-201ENST00000374198 ME3Q16798 604 aa15.1■□□□□ 0.01
PRPF4-201ENST00000374198 CC2D1AQ6P1N0 951 aaPredicted RBP15.1■□□□□ 0.01
PRPF4-201ENST00000374198 PACS2Q86VP3 889 aa15.1■□□□□ 0.01
PRPF4-201ENST00000374198 MNS1Q8NEH6 495 aa15.1■□□□□ 0.01
PRPF4-201ENST00000374198 PGBD1Q96JS3 809 aa15.1■□□□□ 0.01
PRPF4-201ENST00000374198 EFCAB8A8MWE9 144 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 STX1AQ16623 288 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 SRRTQ9BXP5 876 aaKnown RBP15.09■□□□□ 0.01
PRPF4-201ENST00000374198 IMPACTQ9P2X3 320 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 GNAI3P08754 354 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 PDCP20941 246 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 FBLN1P23142 703 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 AXDND1Q5T1B0 1012 aaPredicted RBP15.09■□□□□ 0.01
PRPF4-201ENST00000374198 NECAB1Q8N987 351 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 CCDC34Q96HJ3 373 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 TOMM22Q9NS69 142 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 C1orf167Q5SNV9 1468 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 PHLPP2Q6ZVD8 1323 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 PHLPP1O60346 1717 aa15.09■□□□□ 0.01
PRPF4-201ENST00000374198 ARHGEF28Q8N1W1 1705 aaKnown RBP15.09■□□□□ 0.01
PRPF4-201ENST00000374198 KCNJ6P48051 423 aa15.08■□□□□ 0.01
PRPF4-201ENST00000374198 ETF1P62495 437 aaKnown RBP15.08■□□□□ 0.01
PRPF4-201ENST00000374198 TSGA10IPQ3SY00 556 aa15.08■□□□□ 0.01
PRPF4-201ENST00000374198 DLC1Q96QB1 1528 aa15.08■□□□□ 0
PRPF4-201ENST00000374198 APPP05067 770 aa15.08■□□□□ 0
PRPF4-201ENST00000374198 IVLP07476 585 aa15.08■□□□□ 0
PRPF4-201ENST00000374198 CCT4P50991 539 aaKnown RBP15.08■□□□□ 0
PRPF4-201ENST00000374198 SLC4A10Q6U841 1118 aa15.08■□□□□ 0
PRPF4-201ENST00000374198 DHX40Q8IX18 779 aaKnown RBP15.08■□□□□ 0
PRPF4-201ENST00000374198 DRC1Q96MC2 740 aa15.08■□□□□ 0
PRPF4-201ENST00000374198 MINK1Q8N4C8 1332 aaPredicted RBP15.08■□□□□ 0
PRPF4-201ENST00000374198 ATP2B1P20020 1258 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 ESCO1Q5FWF5 840 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 NBPF11Q86T75 865 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 HOMER1Q86YM7 354 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 JAKMIP1Q96N16 626 aaKnown RBP15.07■□□□□ 0
PRPF4-201ENST00000374198 ORAI2Q96SN7 254 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 DNAI1Q9UI46 699 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 PNMA6EA0A0J9YXQ4 647 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 MAP4K4O95819 1239 aaPredicted RBP15.07■□□□□ 0
PRPF4-201ENST00000374198 SLC4A2P04920 1241 aa15.07■□□□□ 0
PRPF4-201ENST00000374198 ZSWIM6Q9HCJ5 1215 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms