RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 TMX3Q96JJ7 454 aa17.08■□□□□ 0.33
A1CF-202ENST00000373993 OSBPL3Q9H4L5 887 aa17.08■□□□□ 0.33
A1CF-202ENST00000373993 SCN11AQ9UI33 1791 aa17.08■□□□□ 0.32
A1CF-202ENST00000373993 NCBP1Q09161 790 aaKnown RBP17.08■□□□□ 0.32
A1CF-202ENST00000373993 SIRT2Q8IXJ6 389 aa17.08■□□□□ 0.32
A1CF-202ENST00000373993 MRPL50Q8N5N7 158 aaKnown RBP17.08■□□□□ 0.32
A1CF-202ENST00000373993 TTC12Q9H892 705 aaPredicted RBP17.08■□□□□ 0.32
A1CF-202ENST00000373993 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
A1CF-202ENST00000373993 MCCP23508 829 aa17.07■□□□□ 0.32
A1CF-202ENST00000373993 UBE2HP62256 183 aa17.07■□□□□ 0.32
A1CF-202ENST00000373993 NFATC2IPQ8NCF5 419 aa17.07■□□□□ 0.32
A1CF-202ENST00000373993 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
A1CF-202ENST00000373993 GNPATO15228 680 aa17.06■□□□□ 0.32
A1CF-202ENST00000373993 COL24A1Q17RW2 1714 aa17.06■□□□□ 0.32
A1CF-202ENST00000373993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
A1CF-202ENST00000373993 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
A1CF-202ENST00000373993 IRX5P78411 483 aaPredicted RBP17.06■□□□□ 0.32
A1CF-202ENST00000373993 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.06■□□□□ 0.32
A1CF-202ENST00000373993 FUCA2Q9BTY2 467 aa17.06■□□□□ 0.32
A1CF-202ENST00000373993 MTHFSDQ2M296 383 aaKnown RBP17.05■□□□□ 0.32
A1CF-202ENST00000373993 AKAP4Q5JQC9 854 aa17.05■□□□□ 0.32
A1CF-202ENST00000373993 TSC1Q92574 1164 aa17.05■□□□□ 0.32
A1CF-202ENST00000373993 SLC4A9Q96Q91 983 aa17.05■□□□□ 0.32
A1CF-202ENST00000373993 HMGB2P26583 209 aaKnown RBP17.04■□□□□ 0.32
A1CF-202ENST00000373993 ZNF397Q8NF99 534 aaPredicted RBP17.04■□□□□ 0.32
A1CF-202ENST00000373993 FLAD1Q8NFF5 587 aa17.04■□□□□ 0.32
A1CF-202ENST00000373993 KIF18AQ8NI77 898 aa17.04■□□□□ 0.32
A1CF-202ENST00000373993 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
A1CF-202ENST00000373993 FCHSD2O94868 740 aa17.03■□□□□ 0.32
A1CF-202ENST00000373993 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
A1CF-202ENST00000373993 ANKRD44Q8N8A2 993 aa17.03■□□□□ 0.32
A1CF-202ENST00000373993 VAMP4O75379 141 aa17.02■□□□□ 0.32
A1CF-202ENST00000373993 YY1P25490 414 aa17.02■□□□□ 0.32
A1CF-202ENST00000373993 COL5A3P25940 1745 aaPredicted RBP17.02■□□□□ 0.32
A1CF-202ENST00000373993 RPAP1Q9BWH6 1393 aaPredicted RBP17.02■□□□□ 0.31
A1CF-202ENST00000373993 SDSP20132 328 aa17.02■□□□□ 0.31
A1CF-202ENST00000373993 NLGN2Q8NFZ4 835 aa17.02■□□□□ 0.31
A1CF-202ENST00000373993 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.02■□□□□ 0.31
A1CF-202ENST00000373993 NEMFO60524 1076 aa17.01■□□□□ 0.31
A1CF-202ENST00000373993 KCNJ4P48050 445 aa17.01■□□□□ 0.31
A1CF-202ENST00000373993 ZNF830Q96NB3 372 aaPredicted RBP17.01■□□□□ 0.31
A1CF-202ENST00000373993 RNMTO43148 476 aaKnown RBP17■□□□□ 0.31
A1CF-202ENST00000373993 SLC39A6Q13433 755 aa17■□□□□ 0.31
A1CF-202ENST00000373993 CCDC112Q8NEF3 446 aa17■□□□□ 0.31
A1CF-202ENST00000373993 KCNF1Q9H3M0 494 aa17■□□□□ 0.31
A1CF-202ENST00000373993 SLC52A2Q9HAB3 445 aa17■□□□□ 0.31
A1CF-202ENST00000373993 CAVIN2O95810 425 aa17■□□□□ 0.31
A1CF-202ENST00000373993 NEK4P51957 841 aa17■□□□□ 0.31
A1CF-202ENST00000373993 GNAI1P63096 354 aa17■□□□□ 0.31
A1CF-202ENST00000373993 JARID2Q92833 1246 aaPredicted RBP17■□□□□ 0.31
A1CF-202ENST00000373993 EFCC1Q9HA90 598 aa17■□□□□ 0.31
A1CF-202ENST00000373993 KIF2AO00139 706 aaPredicted RBP16.99■□□□□ 0.31
A1CF-202ENST00000373993 GPR162Q16538 588 aa16.99■□□□□ 0.31
A1CF-202ENST00000373993 KCND1Q9NSA2 647 aa16.99■□□□□ 0.31
A1CF-202ENST00000373993 IFT57Q9NWB7 429 aa16.99■□□□□ 0.31
A1CF-202ENST00000373993 RTCBQ9Y3I0 505 aaKnown RBP16.99■□□□□ 0.31
A1CF-202ENST00000373993 MYH14Q7Z406 1995 aaKnown RBP16.99■□□□□ 0.31
A1CF-202ENST00000373993 MAP3K5Q99683 1374 aa16.99■□□□□ 0.31
A1CF-202ENST00000373993 TUBB4AP04350 444 aa16.98■□□□□ 0.31
A1CF-202ENST00000373993 CCDC192P0DO97 292 aa16.98■□□□□ 0.31
A1CF-202ENST00000373993 PYCARDQ9ULZ3 195 aa16.98■□□□□ 0.31
A1CF-202ENST00000373993 ZNF831Q5JPB2 1677 aa16.98■□□□□ 0.31
A1CF-202ENST00000373993 TJP1Q07157 1748 aa16.98■□□□□ 0.31
A1CF-202ENST00000373993 PRKAR2BP31323 418 aa16.98■□□□□ 0.31
A1CF-202ENST00000373993 YY1AP1Q9H869 796 aa16.98■□□□□ 0.31
A1CF-202ENST00000373993 CCDC171Q6TFL3 1326 aa16.98■□□□□ 0.31
A1CF-202ENST00000373993 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
A1CF-202ENST00000373993 CDC25BP30305 580 aa16.97■□□□□ 0.31
A1CF-202ENST00000373993 TRAPPC3LQ5T215 181 aa16.97■□□□□ 0.31
A1CF-202ENST00000373993 MRC1P22897 1456 aa16.96■□□□□ 0.31
A1CF-202ENST00000373993 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
A1CF-202ENST00000373993 CTR9Q6PD62 1173 aa16.96■□□□□ 0.31
A1CF-202ENST00000373993 FAM200AQ8TCP9 573 aa16.96■□□□□ 0.31
A1CF-202ENST00000373993 KIF1BPQ96EK5 621 aa16.96■□□□□ 0.31
A1CF-202ENST00000373993 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.31
A1CF-202ENST00000373993 C4AP0C0L4 1744 aa16.95■□□□□ 0.3
A1CF-202ENST00000373993 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
A1CF-202ENST00000373993 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
A1CF-202ENST00000373993 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
A1CF-202ENST00000373993 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
A1CF-202ENST00000373993 GADD45BO75293 160 aaPredicted RBP16.95■□□□□ 0.3
A1CF-202ENST00000373993 TNNT1P13805 278 aa16.95■□□□□ 0.3
A1CF-202ENST00000373993 BMS1Q14692 1282 aaKnown RBP16.95■□□□□ 0.3
A1CF-202ENST00000373993 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
A1CF-202ENST00000373993 ARHGEF1Q92888 912 aaKnown RBP16.95■□□□□ 0.3
A1CF-202ENST00000373993 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
A1CF-202ENST00000373993 GNAT3A8MTJ3 354 aa16.94■□□□□ 0.3
A1CF-202ENST00000373993 HMMRO75330 724 aa16.94■□□□□ 0.3
A1CF-202ENST00000373993 ZSCAN22P10073 491 aaPredicted RBP16.94■□□□□ 0.3
A1CF-202ENST00000373993 CYP2C19P33261 490 aa16.94■□□□□ 0.3
A1CF-202ENST00000373993 RFC4P35249 363 aa16.94■□□□□ 0.3
A1CF-202ENST00000373993 CHD4Q14839 1912 aa16.94■□□□□ 0.3
A1CF-202ENST00000373993 ATP10DQ9P241 1426 aa16.94■□□□□ 0.3
A1CF-202ENST00000373993 LMOD3Q0VAK6 560 aa16.93■□□□□ 0.3
A1CF-202ENST00000373993 TEFQ10587 303 aa16.93■□□□□ 0.3
A1CF-202ENST00000373993 C17orf53Q8N3J3 647 aaPredicted RBP16.93■□□□□ 0.3
A1CF-202ENST00000373993 ATP8B1O43520 1251 aa16.93■□□□□ 0.3
A1CF-202ENST00000373993 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
A1CF-202ENST00000373993 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
A1CF-202ENST00000373993 MMP10P09238 476 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms