RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 LAMB2P55268 1798 aa19.62■□□□□ 0.73
CDKN1A-202ENST00000373711 BBOX1O75936 387 aa19.61■□□□□ 0.73
CDKN1A-202ENST00000373711 MIS18AQ9NYP9 233 aa19.61■□□□□ 0.73
CDKN1A-202ENST00000373711 ABCC4O15439 1325 aa19.6■□□□□ 0.73
CDKN1A-202ENST00000373711 H7C1D1 291 aa19.6■□□□□ 0.73
CDKN1A-202ENST00000373711 KIAA2012Q0VF49 1180 aa19.6■□□□□ 0.73
CDKN1A-202ENST00000373711 MPNDQ8N594 471 aa19.6■□□□□ 0.73
CDKN1A-202ENST00000373711 UTP14AQ9BVJ6 771 aaKnown RBP19.6■□□□□ 0.73
CDKN1A-202ENST00000373711 EIF4A1P60842 406 aaKnown RBP19.59■□□□□ 0.73
CDKN1A-202ENST00000373711 SP8Q8IXZ3 490 aa19.59■□□□□ 0.73
CDKN1A-202ENST00000373711 SAGE1Q9NXZ1 904 aa19.59■□□□□ 0.73
CDKN1A-202ENST00000373711 HUNKP57058 714 aa19.58■□□□□ 0.72
CDKN1A-202ENST00000373711 SLC10A5Q5PT55 438 aa19.58■□□□□ 0.72
CDKN1A-202ENST00000373711 TMC4Q7Z404 712 aa19.58■□□□□ 0.72
CDKN1A-202ENST00000373711 DDX60Q8IY21 1712 aaKnown RBP19.58■□□□□ 0.72
CDKN1A-202ENST00000373711 RAD17O75943 681 aa19.57■□□□□ 0.72
CDKN1A-202ENST00000373711 PPP2R1AP30153 589 aa19.57■□□□□ 0.72
CDKN1A-202ENST00000373711 HSP90AB3PQ58FF7 597 aa19.57■□□□□ 0.72
CDKN1A-202ENST00000373711 DDX46Q7L014 1031 aaKnown RBP19.57■□□□□ 0.72
CDKN1A-202ENST00000373711 CNOT7Q9UIV1 285 aaKnown RBP19.57■□□□□ 0.72
CDKN1A-202ENST00000373711 TNRC18O15417 2968 aaPredicted RBP19.57■□□□□ 0.72
CDKN1A-202ENST00000373711 POLR2AP24928 1970 aaKnown RBP19.57■□□□□ 0.72
CDKN1A-202ENST00000373711 C3orf67Q6ZVT6 689 aa19.56■□□□□ 0.72
CDKN1A-202ENST00000373711 CCDC102AQ96A19 550 aa19.56■□□□□ 0.72
CDKN1A-202ENST00000373711 LRRC37AA6NMS7 1700 aa19.56■□□□□ 0.72
CDKN1A-202ENST00000373711 C2orf69Q8N8R5 385 aa19.55■□□□□ 0.72
CDKN1A-202ENST00000373711 TRPM4Q8TD43 1214 aa19.55■□□□□ 0.72
CDKN1A-202ENST00000373711 HIRAP54198 1017 aaPredicted RBP19.54■□□□□ 0.72
CDKN1A-202ENST00000373711 GRAPQ13588 217 aa19.54■□□□□ 0.72
CDKN1A-202ENST00000373711 RGMBQ6NW40 437 aa19.54■□□□□ 0.72
CDKN1A-202ENST00000373711 SLC51AQ86UW1 340 aa19.54■□□□□ 0.72
CDKN1A-202ENST00000373711 MICALL2Q8IY33 904 aa19.54■□□□□ 0.72
CDKN1A-202ENST00000373711 GRAPLQ8TC17 118 aaPredicted RBP19.54■□□□□ 0.72
CDKN1A-202ENST00000373711 DPF2Q92785 391 aa19.54■□□□□ 0.72
CDKN1A-202ENST00000373711 PNNQ9H307 717 aaKnown RBP19.54■□□□□ 0.72
CDKN1A-202ENST00000373711 USP48Q86UV5 1035 aa19.53■□□□□ 0.72
CDKN1A-202ENST00000373711 GBA2Q9HCG7 927 aaPredicted RBP19.53■□□□□ 0.72
CDKN1A-202ENST00000373711 KRT26Q7Z3Y9 468 aa19.52■□□□□ 0.72
CDKN1A-202ENST00000373711 DCPSQ96C86 337 aaKnown RBP19.52■□□□□ 0.72
CDKN1A-202ENST00000373711 MAPK8IP3Q9UPT6 1336 aa19.51■□□□□ 0.71
CDKN1A-202ENST00000373711 RPS12P25398 132 aaKnown RBP19.51■□□□□ 0.71
CDKN1A-202ENST00000373711 NFE2L2Q16236 605 aa19.51■□□□□ 0.71
CDKN1A-202ENST00000373711 TAF1P21675 1872 aa19.51■□□□□ 0.71
CDKN1A-202ENST00000373711 SH3TC1Q8TE82 1336 aa19.51■□□□□ 0.71
CDKN1A-202ENST00000373711 DUOX1Q9NRD9 1551 aa19.5■□□□□ 0.71
CDKN1A-202ENST00000373711 REM2Q8IYK8 340 aaPredicted RBP19.5■□□□□ 0.71
CDKN1A-202ENST00000373711 TSPYL4Q9UJ04 414 aa19.5■□□□□ 0.71
CDKN1A-202ENST00000373711 YDJCA8MPS7 323 aa19.49■□□□□ 0.71
CDKN1A-202ENST00000373711 ZNF157P51786 506 aaPredicted RBP19.49■□□□□ 0.71
CDKN1A-202ENST00000373711 WASHC4Q2M389 1173 aa19.49■□□□□ 0.71
CDKN1A-202ENST00000373711 TRMT112Q9UI30 125 aaKnown RBP19.49■□□□□ 0.71
CDKN1A-202ENST00000373711 FAM155AB1AL88 458 aaPredicted RBP19.48■□□□□ 0.71
CDKN1A-202ENST00000373711 HCLS1P14317 486 aaPredicted RBP19.48■□□□□ 0.71
CDKN1A-202ENST00000373711 EIF2S2P20042 333 aaKnown RBP19.48■□□□□ 0.71
CDKN1A-202ENST00000373711 NLRP10Q86W26 655 aa19.48■□□□□ 0.71
CDKN1A-202ENST00000373711 ZIC5Q96T25 663 aa19.48■□□□□ 0.71
CDKN1A-202ENST00000373711 EYA3Q99504 573 aa19.48■□□□□ 0.71
CDKN1A-202ENST00000373711 PSMD14O00487 310 aa19.47■□□□□ 0.71
CDKN1A-202ENST00000373711 SOX10P56693 466 aa19.47■□□□□ 0.71
CDKN1A-202ENST00000373711 KIF23Q02241 960 aaPredicted RBP19.47■□□□□ 0.71
CDKN1A-202ENST00000373711 TBC1D10BQ4KMP7 808 aaPredicted RBP19.47■□□□□ 0.71
CDKN1A-202ENST00000373711 PRPF38BQ5VTL8 546 aaKnown RBP19.47■□□□□ 0.71
CDKN1A-202ENST00000373711 SAMD7Q7Z3H4 446 aa19.47■□□□□ 0.71
CDKN1A-202ENST00000373711 SULF1Q8IWU6 871 aa19.47■□□□□ 0.71
CDKN1A-202ENST00000373711 THUMPD2Q9BTF0 503 aaKnown RBP19.47■□□□□ 0.71
CDKN1A-202ENST00000373711 ZBTB12Q9Y330 459 aaPredicted RBP19.47■□□□□ 0.71
CDKN1A-202ENST00000373711 TRPA1O75762 1119 aa19.46■□□□□ 0.71
CDKN1A-202ENST00000373711 LRP10Q7Z4F1 713 aa19.46■□□□□ 0.71
CDKN1A-202ENST00000373711 CTU1Q7Z7A3 348 aaKnown RBP19.46■□□□□ 0.71
CDKN1A-202ENST00000373711 BABAM1Q9NWV8 329 aa19.46■□□□□ 0.71
CDKN1A-202ENST00000373711 RNF186Q9NXI6 227 aa19.46■□□□□ 0.71
CDKN1A-202ENST00000373711 SHTN1A0MZ66 631 aa19.45■□□□□ 0.7
CDKN1A-202ENST00000373711 SLC10A3P09131 477 aa19.45■□□□□ 0.7
CDKN1A-202ENST00000373711 TCIRG1Q13488 830 aa19.45■□□□□ 0.7
CDKN1A-202ENST00000373711 PDIA6Q15084 440 aa19.45■□□□□ 0.7
CDKN1A-202ENST00000373711 DBNDD1Q9H9R9 158 aa19.45■□□□□ 0.7
CDKN1A-202ENST00000373711 NSFL1CQ9UNZ2 370 aaKnown RBP19.45■□□□□ 0.7
CDKN1A-202ENST00000373711 C6orf229H3BNL8 230 aa19.44■□□□□ 0.7
CDKN1A-202ENST00000373711 KIF4BQ2VIQ3 1234 aa19.44■□□□□ 0.7
CDKN1A-202ENST00000373711 COPS6Q7L5N1 327 aa19.44■□□□□ 0.7
CDKN1A-202ENST00000373711 PLEKHF1Q96S99 279 aa19.44■□□□□ 0.7
CDKN1A-202ENST00000373711 ADM5C9JUS6 153 aa19.43■□□□□ 0.7
CDKN1A-202ENST00000373711 ECE2O60344 883 aa19.43■□□□□ 0.7
CDKN1A-202ENST00000373711 AIMP1Q12904 312 aaKnown RBP19.43■□□□□ 0.7
CDKN1A-202ENST00000373711 RBM26Q5T8P6 1007 aaKnown RBP19.43■□□□□ 0.7
CDKN1A-202ENST00000373711 PAPPA2Q9BXP8 1791 aa19.42■□□□□ 0.7
CDKN1A-202ENST00000373711 LMOD3Q0VAK6 560 aa19.42■□□□□ 0.7
CDKN1A-202ENST00000373711 PKN2Q16513 984 aaKnown RBP19.42■□□□□ 0.7
CDKN1A-202ENST00000373711 XAGE3Q8WTP9 111 aa19.42■□□□□ 0.7
CDKN1A-202ENST00000373711 GGA3Q9NZ52 723 aa19.42■□□□□ 0.7
CDKN1A-202ENST00000373711 PSME4Q14997 1843 aa19.41■□□□□ 0.7
CDKN1A-202ENST00000373711 G3V3G9 751 aa19.41■□□□□ 0.7
CDKN1A-202ENST00000373711 RIMBP2O15034 1052 aa19.41■□□□□ 0.7
CDKN1A-202ENST00000373711 ANXA1P04083 346 aa19.41■□□□□ 0.7
CDKN1A-202ENST00000373711 FKBP1BP68106 108 aa19.41■□□□□ 0.7
CDKN1A-202ENST00000373711 PROSER3Q2NL68 480 aa19.41■□□□□ 0.7
CDKN1A-202ENST00000373711 DCAF8Q5TAQ9 597 aa19.41■□□□□ 0.7
CDKN1A-202ENST00000373711 CSRNP1Q96S65 589 aa19.4■□□□□ 0.7
CDKN1A-202ENST00000373711 SCN9AQ15858 1988 aa19.39■□□□□ 0.7
CDKN1A-202ENST00000373711 SF3B3Q15393 1217 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms