RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 AFAP1L1Q8TED9 768 aa10.52□□□□□ -0.72
PTPRT-205ENST00000373193 NUF2Q9BZD4 464 aa10.52□□□□□ -0.72
PTPRT-205ENST00000373193 TACO1Q9BSH4 297 aaKnown RBP10.52□□□□□ -0.72
PTPRT-205ENST00000373193 OGFRQ9NZT2 677 aa10.52□□□□□ -0.72
PTPRT-205ENST00000373193 XRCC6P12956 609 aaKnown RBP eCLIP10.52□□□□□ -0.73
PTPRT-205ENST00000373193 PRR16Q569H4 304 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 METTL24Q5JXM2 366 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 ZNF569Q5MCW4 686 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 HDXQ7Z353 690 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 UBE2HP62256 183 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 ARHGEF2Q92974 986 aaKnown RBP10.52□□□□□ -0.73
PTPRT-205ENST00000373193 RAB34Q9BZG1 259 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 INPP5BP32019 993 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 LRSAM1Q6UWE0 723 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 SYT10Q6XYQ8 523 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 RNF168Q8IYW5 571 aaPredicted RBP10.52□□□□□ -0.73
PTPRT-205ENST00000373193 DACT3Q96B18 629 aaPredicted RBP10.52□□□□□ -0.73
PTPRT-205ENST00000373193 DNAJC25Q9H1X3 360 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 A0A087WZG4 1122 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 FCHSD2O94868 740 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 CLCN1P35523 988 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 FERMT1Q9BQL6 677 aa10.52□□□□□ -0.73
PTPRT-205ENST00000373193 CRACR2BQ8N4Y2 399 aaPredicted RBP10.52□□□□□ -0.73
PTPRT-205ENST00000373193 SYKP43405 635 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 RNASE9P60153 205 aaKnown RBP10.51□□□□□ -0.73
PTPRT-205ENST00000373193 PIP4K2BP78356 416 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 GMNNO75496 209 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 GCKP35557 465 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 HAND2P61296 217 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 NEDD9Q14511 834 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 PPP1R9BQ96SB3 815 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 PLCB3Q01970 1234 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 TCHPQ9BT92 498 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 VCX3BQ9H321 246 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 IFIT3O14879 490 aaKnown RBP10.51□□□□□ -0.73
PTPRT-205ENST00000373193 KIF5AQ12840 1032 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 PPP1R7Q15435 360 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 WDR63Q8IWG1 891 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 XAB2Q9HCS7 855 aaKnown RBP10.51□□□□□ -0.73
PTPRT-205ENST00000373193 CRCPO75575 148 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 MICU3Q86XE3 530 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 CUL5Q93034 780 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 CA8P35219 290 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 TSPYL2Q9H2G4 693 aaPredicted RBP10.51□□□□□ -0.73
PTPRT-205ENST00000373193 BANK1Q8NDB2 785 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 ZNF530Q6P9A1 599 aaPredicted RBP10.51□□□□□ -0.73
PTPRT-205ENST00000373193 PNMA8AQ86V59 439 aaPredicted RBP10.51□□□□□ -0.73
PTPRT-205ENST00000373193 DDX12PQ92771 950 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 SAMM50Q9Y512 469 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 TTF1Q15361 905 aaPredicted RBP10.51□□□□□ -0.73
PTPRT-205ENST00000373193 LRCH2Q5VUJ6 765 aa10.51□□□□□ -0.73
PTPRT-205ENST00000373193 CYLC1P35663 651 aaPredicted RBP10.5□□□□□ -0.73
PTPRT-205ENST00000373193 TMEM87AQ8NBN3 555 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 UVSSAQ2YD98 709 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPRT-205ENST00000373193 NBPF8Q3BBV2 869 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 SF3B2Q13435 895 aaKnown RBP10.5□□□□□ -0.73
PTPRT-205ENST00000373193 KIF20AO95235 890 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 PEX19P40855 299 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 TSNAXIP1Q2TAA8 658 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 CATIPQ7Z7H3 387 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 FMNL3Q8IVF7 1028 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 NECAB1Q8N987 351 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 PPP2R3AQ06190 1150 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 USP48Q86UV5 1035 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 ATF3P18847 181 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 SLC26A6Q9BXS9 759 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 B4GALNT4Q76KP1 1039 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 SMAP1Q8IYB5 467 aaPredicted RBP10.5□□□□□ -0.73
PTPRT-205ENST00000373193 CCDC102BQ68D86 513 aa10.5□□□□□ -0.73
PTPRT-205ENST00000373193 MAP2K2P36507 400 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 IFT74Q96LB3 600 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 GBP5Q96PP8 586 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 SPAG5Q96R06 1193 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 TCP11L1Q9NUJ3 509 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 BTBD11A6QL63 1104 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 STK38LQ9Y2H1 464 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 LMOD1P29536 600 aaPredicted RBP10.49□□□□□ -0.73
PTPRT-205ENST00000373193 GEN1Q17RS7 908 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 USP16Q9Y5T5 823 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 NKIRAS1Q9NYS0 192 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 CCDC8Q9H0W5 538 aaPredicted RBP10.49□□□□□ -0.73
PTPRT-205ENST00000373193 MARCKSP29966 332 aaPredicted RBP10.49□□□□□ -0.73
PTPRT-205ENST00000373193 C17orf53Q8N3J3 647 aaPredicted RBP10.49□□□□□ -0.73
PTPRT-205ENST00000373193 LRRC2Q9BYS8 371 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 TBCAO75347 108 aaKnown RBP10.49□□□□□ -0.73
PTPRT-205ENST00000373193 THUMPD2Q9BTF0 503 aaKnown RBP10.49□□□□□ -0.73
PTPRT-205ENST00000373193 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.49□□□□□ -0.73
PTPRT-205ENST00000373193 STAT6P42226 847 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 AKNAD1Q5T1N1 836 aa10.49□□□□□ -0.73
PTPRT-205ENST00000373193 UBA7P41226 1012 aa10.48□□□□□ -0.73
PTPRT-205ENST00000373193 CCDC65Q8IXS2 484 aa10.48□□□□□ -0.73
PTPRT-205ENST00000373193 CCDC196A0A1B0GTZ2 297 aa10.48□□□□□ -0.73
PTPRT-205ENST00000373193 NDUFAB1O14561 156 aa10.48□□□□□ -0.73
PTPRT-205ENST00000373193 CXorf38Q8TB03 319 aa10.48□□□□□ -0.73
PTPRT-205ENST00000373193 MCUR1Q96AQ8 359 aa10.48□□□□□ -0.73
PTPRT-205ENST00000373193 PRIM1P49642 420 aaKnown RBP10.48□□□□□ -0.73
PTPRT-205ENST00000373193 CCDC122Q5T0U0 273 aa10.48□□□□□ -0.73
PTPRT-205ENST00000373193 PLVAPQ9BX97 442 aa10.48□□□□□ -0.73
PTPRT-205ENST00000373193 FRMD4BQ9Y2L6 1034 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms