RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 TMEM132AQ24JP5 1023 aa12.14□□□□□ -0.47
NUP188-201ENST00000372577 ARHGAP29Q52LW3 1261 aa12.14□□□□□ -0.47
NUP188-201ENST00000372577 FKBP15Q5T1M5 1219 aa12.14□□□□□ -0.47
NUP188-201ENST00000372577 ANKRD18AQ8IVF6 992 aa12.14□□□□□ -0.47
NUP188-201ENST00000372577 SSBP05455 408 aaKnown RBP eCLIP12.13□□□□□ -0.47
NUP188-201ENST00000372577 ZFYVE27Q5T4F4 411 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 KCNG4Q8TDN1 519 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 CLASP1Q7Z460 1538 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
NUP188-201ENST00000372577 SLC39A6Q13433 755 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 PTPN14Q15678 1187 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
NUP188-201ENST00000372577 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 CLIP2Q9UDT6 1046 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 AMPD3Q01432 767 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 CDCA7Q9BWT1 371 aaPredicted RBP12.13□□□□□ -0.47
NUP188-201ENST00000372577 MPHOSPH10O00566 681 aaKnown RBP12.13□□□□□ -0.47
NUP188-201ENST00000372577 RBM25P49756 843 aaKnown RBP12.13□□□□□ -0.47
NUP188-201ENST00000372577 BRF1Q92994 677 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 NYXQ9GZU5 481 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 SNRKQ9NRH2 765 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 LRRC27Q9C0I9 530 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 GBP3Q9H0R5 595 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 TNNQ9UQP3 1299 aa12.13□□□□□ -0.47
NUP188-201ENST00000372577 RTL1A6NKG5 1358 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 GUCY1B3Q02153 619 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 NFATC2IPQ8NCF5 419 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 CCDC148Q8NFR7 591 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 ESR2Q92731 530 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 KAT14Q9H8E8 782 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 CHMLP26374 656 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 RAB3GAP1Q15042 981 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 ZSCAN23Q3MJ62 389 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 CUL5Q93034 780 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 RBM27Q9P2N5 1060 aaKnown RBP12.12□□□□□ -0.47
NUP188-201ENST00000372577 FAM135BQ49AJ0 1406 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 ST5P78524 1137 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 WTAPQ15007 396 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 KIF18AQ8NI77 898 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 UTP14AQ9BVJ6 771 aaKnown RBP12.12□□□□□ -0.47
NUP188-201ENST00000372577 GOLGA6L9A6NEM1 432 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 ZBTB43O43298 467 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 GNAQP50148 359 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 NMIQ13287 307 aaPredicted RBP12.12□□□□□ -0.47
NUP188-201ENST00000372577 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
NUP188-201ENST00000372577 KLF18A0A0U1RQI7 1052 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 RNF113AO15541 343 aaKnown RBP12.11□□□□□ -0.47
NUP188-201ENST00000372577 KIAA1328Q86T90 577 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 PHF23Q9BUL5 403 aaPredicted RBP12.11□□□□□ -0.47
NUP188-201ENST00000372577 TOM1O60784 492 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 USP26Q9BXU7 913 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 PDCL3Q9H2J4 239 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 AATKQ6ZMQ8 1374 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 F13A1P00488 732 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 RFC4P35249 363 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 TRAF1Q13077 416 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
NUP188-201ENST00000372577 TCP11L1Q9NUJ3 509 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 ATP7BP35670 1465 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 GOLGA6L10A6NI86 522 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 NBPF5PQ86XG9 351 aaPredicted RBP12.11□□□□□ -0.47
NUP188-201ENST00000372577 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 DDB1Q16531 1140 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 ATL3Q6DD88 541 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 ADCY10Q96PN6 1610 aa12.11□□□□□ -0.47
NUP188-201ENST00000372577 HLA-DOAP06340 250 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 ZNF165P49910 485 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 PLBD2Q8NHP8 589 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 PIBF1Q8WXW3 757 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 UBXN4Q92575 508 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 HELLSQ9NRZ9 838 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 CALM1P0DP23 149 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 CALM2P0DP24 149 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 CALM3P0DP25 149 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 SPA17Q15506 151 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 MICU3Q86XE3 530 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 FAM114A1Q8IWE2 563 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 TFIP11Q9UBB9 837 aaKnown RBP12.1□□□□□ -0.47
NUP188-201ENST00000372577 USP25Q9UHP3 1055 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 ARAP3Q8WWN8 1544 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 ATP6V1AP38606 617 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 LEKR1Q6ZMV7 388 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 CKAP2LQ8IYA6 745 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 CALML4Q96GE6 196 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 NLRP3Q96P20 1036 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 KDM6BO15054 1643 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 NBPF7P0C2Y1 421 aaPredicted RBP12.1□□□□□ -0.47
NUP188-201ENST00000372577 HAND2P61296 217 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 CCDC150Q8NCX0 1101 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 RMND1Q9NWS8 449 aa12.1□□□□□ -0.47
NUP188-201ENST00000372577 KIF5CO60282 957 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 MCM3P25205 808 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 CCDC96Q2M329 555 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 TAF4BQ92750 862 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 SETDB2Q96T68 719 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 METTL22Q9BUU2 404 aaPredicted RBP12.09□□□□□ -0.47
NUP188-201ENST00000372577 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
NUP188-201ENST00000372577 KIF1BO60333 1816 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms