RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 MPNDQ8N594 471 aa17.07■□□□□ 0.32
NDC1-201ENST00000371429 TSG101Q99816 390 aa17.07■□□□□ 0.32
NDC1-201ENST00000371429 MCMDC2Q4G0Z9 681 aa17.07■□□□□ 0.32
NDC1-201ENST00000371429 CNNM2Q9H8M5 875 aa17.07■□□□□ 0.32
NDC1-201ENST00000371429 SDSP20132 328 aa17.07■□□□□ 0.32
NDC1-201ENST00000371429 TRAF1Q13077 416 aa17.07■□□□□ 0.32
NDC1-201ENST00000371429 BRF1Q92994 677 aa17.07■□□□□ 0.32
NDC1-201ENST00000371429 PPFIA3O75145 1194 aa17.06■□□□□ 0.32
NDC1-201ENST00000371429 PARP10Q53GL7 1025 aa17.06■□□□□ 0.32
NDC1-201ENST00000371429 TMTC2Q8N394 836 aa17.06■□□□□ 0.32
NDC1-201ENST00000371429 KIF20AO95235 890 aa17.06■□□□□ 0.32
NDC1-201ENST00000371429 PLCG2P16885 1265 aa17.06■□□□□ 0.32
NDC1-201ENST00000371429 MPHOSPH6Q99547 160 aaKnown RBP17.06■□□□□ 0.32
NDC1-201ENST00000371429 PAG1Q9NWQ8 432 aa17.06■□□□□ 0.32
NDC1-201ENST00000371429 SAMM50Q9Y512 469 aa17.06■□□□□ 0.32
NDC1-201ENST00000371429 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
NDC1-201ENST00000371429 KLF18A0A0U1RQI7 1052 aa17.06■□□□□ 0.32
NDC1-201ENST00000371429 FAM89AQ96GI7 184 aa17.06■□□□□ 0.32
NDC1-201ENST00000371429 SH3TC1Q8TE82 1336 aa17.06■□□□□ 0.32
NDC1-201ENST00000371429 IFIT1BQ5T764 474 aaKnown RBP17.06■□□□□ 0.32
NDC1-201ENST00000371429 RBM17Q96I25 401 aaKnown RBP17.06■□□□□ 0.32
NDC1-201ENST00000371429 POTEJP0CG39 1038 aa17.05■□□□□ 0.32
NDC1-201ENST00000371429 HSP90AA2PQ14568 343 aaPredicted RBP17.05■□□□□ 0.32
NDC1-201ENST00000371429 CCDC181Q5TID7 509 aa17.05■□□□□ 0.32
NDC1-201ENST00000371429 ERCC4Q92889 916 aaPredicted RBP17.05■□□□□ 0.32
NDC1-201ENST00000371429 PCDHB15Q9Y5E8 787 aa17.05■□□□□ 0.32
NDC1-201ENST00000371429 MAGEB6P1A0A0J9YX57 407 aa17.05■□□□□ 0.32
NDC1-201ENST00000371429 DNAI2Q9GZS0 605 aa17.05■□□□□ 0.32
NDC1-201ENST00000371429 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
NDC1-201ENST00000371429 CALML4Q96GE6 196 aa17.05■□□□□ 0.32
NDC1-201ENST00000371429 ZBTB43O43298 467 aa17.05■□□□□ 0.32
NDC1-201ENST00000371429 UBA7P41226 1012 aa17.05■□□□□ 0.32
NDC1-201ENST00000371429 GJB2P29033 226 aa17.04■□□□□ 0.32
NDC1-201ENST00000371429 IDEP14735 1019 aa17.04■□□□□ 0.32
NDC1-201ENST00000371429 LIG1P18858 919 aa17.04■□□□□ 0.32
NDC1-201ENST00000371429 ZFYVE16Q7Z3T8 1539 aa17.04■□□□□ 0.32
NDC1-201ENST00000371429 NBPF7P0C2Y1 421 aaPredicted RBP17.04■□□□□ 0.32
NDC1-201ENST00000371429 CNNM3Q8NE01 707 aa17.04■□□□□ 0.32
NDC1-201ENST00000371429 LDHBP07195 334 aaKnown RBP17.04■□□□□ 0.32
NDC1-201ENST00000371429 IL13P35225 146 aa17.04■□□□□ 0.32
NDC1-201ENST00000371429 FAM177A1Q8N128 213 aaPredicted RBP17.04■□□□□ 0.32
NDC1-201ENST00000371429 PLBD2Q8NHP8 589 aa17.04■□□□□ 0.32
NDC1-201ENST00000371429 ANO10Q9NW15 660 aa17.03■□□□□ 0.32
NDC1-201ENST00000371429 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
NDC1-201ENST00000371429 GNAQP50148 359 aa17.03■□□□□ 0.32
NDC1-201ENST00000371429 MAST1Q9Y2H9 1570 aa17.03■□□□□ 0.32
NDC1-201ENST00000371429 PZPP20742 1482 aa17.03■□□□□ 0.32
NDC1-201ENST00000371429 ZNF397Q8NF99 534 aaPredicted RBP17.03■□□□□ 0.32
NDC1-201ENST00000371429 MCM9Q9NXL9 1143 aa17.03■□□□□ 0.32
NDC1-201ENST00000371429 TFIP11Q9UBB9 837 aaKnown RBP17.03■□□□□ 0.32
NDC1-201ENST00000371429 RBM8AQ9Y5S9 174 aaKnown RBP17.03■□□□□ 0.32
NDC1-201ENST00000371429 COL17A1Q9UMD9 1497 aaPredicted RBP17.03■□□□□ 0.32
NDC1-201ENST00000371429 PLEKHG3A1L390 1219 aa17.03■□□□□ 0.32
NDC1-201ENST00000371429 TFCP2Q12800 502 aa17.03■□□□□ 0.32
NDC1-201ENST00000371429 FKBP15Q5T1M5 1219 aa17.03■□□□□ 0.32
NDC1-201ENST00000371429 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
NDC1-201ENST00000371429 ERLIN2O94905 339 aa17.02■□□□□ 0.32
NDC1-201ENST00000371429 HCLS1P14317 486 aaPredicted RBP17.02■□□□□ 0.32
NDC1-201ENST00000371429 SLC52A2Q9HAB3 445 aa17.02■□□□□ 0.32
NDC1-201ENST00000371429 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
NDC1-201ENST00000371429 BABAM1Q9NWV8 329 aa17.02■□□□□ 0.32
NDC1-201ENST00000371429 SYCE3A1L190 88 aa17.02■□□□□ 0.32
NDC1-201ENST00000371429 EPB41L2O43491 1005 aaKnown RBP17.02■□□□□ 0.32
NDC1-201ENST00000371429 SSR1P43307 286 aaKnown RBP17.02■□□□□ 0.32
NDC1-201ENST00000371429 MIGA1Q8NAN2 632 aa17.02■□□□□ 0.32
NDC1-201ENST00000371429 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.32
NDC1-201ENST00000371429 JAG2Q9Y219 1238 aa17.02■□□□□ 0.32
NDC1-201ENST00000371429 FGFR1OPO95684 399 aaKnown RBP17.02■□□□□ 0.31
NDC1-201ENST00000371429 GNAT2P19087 354 aa17.02■□□□□ 0.31
NDC1-201ENST00000371429 LMOD1P29536 600 aaPredicted RBP17.02■□□□□ 0.31
NDC1-201ENST00000371429 FSIP1Q8NA03 581 aa17.02■□□□□ 0.31
NDC1-201ENST00000371429 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.31
NDC1-201ENST00000371429 PATL2C9JE40 543 aaKnown RBP17.01■□□□□ 0.31
NDC1-201ENST00000371429 A1BGP04217 495 aa17.01■□□□□ 0.31
NDC1-201ENST00000371429 AMPD3Q01432 767 aa17.01■□□□□ 0.31
NDC1-201ENST00000371429 C16orf71Q8IYS4 520 aaPredicted RBP17.01■□□□□ 0.31
NDC1-201ENST00000371429 CCDC87Q9NVE4 849 aa17.01■□□□□ 0.31
NDC1-201ENST00000371429 DNMT1P26358 1616 aaKnown RBP17.01■□□□□ 0.31
NDC1-201ENST00000371429 STX6O43752 255 aa17.01■□□□□ 0.31
NDC1-201ENST00000371429 TCEANC2Q96MN5 208 aa17.01■□□□□ 0.31
NDC1-201ENST00000371429 APBA3O96018 575 aa17.01■□□□□ 0.31
NDC1-201ENST00000371429 RTN1Q16799 776 aa17.01■□□□□ 0.31
NDC1-201ENST00000371429 SKIDA1Q1XH10 827 aa17.01■□□□□ 0.31
NDC1-201ENST00000371429 NEBLO76041 1014 aa17■□□□□ 0.31
NDC1-201ENST00000371429 CEP85Q6P2H3 762 aa17■□□□□ 0.31
NDC1-201ENST00000371429 MAGEB6Q8N7X4 407 aa17■□□□□ 0.31
NDC1-201ENST00000371429 PANK2Q9BZ23 570 aa17■□□□□ 0.31
NDC1-201ENST00000371429 TTC41PQ6P2S7 1318 aa17■□□□□ 0.31
NDC1-201ENST00000371429 DNAJC10Q8IXB1 793 aa17■□□□□ 0.31
NDC1-201ENST00000371429 GRPEL1Q9HAV7 217 aa17■□□□□ 0.31
NDC1-201ENST00000371429 YEATS2Q9ULM3 1422 aa17■□□□□ 0.31
NDC1-201ENST00000371429 RNF113AO15541 343 aaKnown RBP17■□□□□ 0.31
NDC1-201ENST00000371429 HOXB7P09629 217 aa17■□□□□ 0.31
NDC1-201ENST00000371429 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
NDC1-201ENST00000371429 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
NDC1-201ENST00000371429 UFL1O94874 794 aa17■□□□□ 0.31
NDC1-201ENST00000371429 CACNA2D4Q7Z3S7 1137 aa17■□□□□ 0.31
NDC1-201ENST00000371429 CCDC148Q8NFR7 591 aa17■□□□□ 0.31
NDC1-201ENST00000371429 BAG6P46379 1132 aa16.99■□□□□ 0.31
NDC1-201ENST00000371429 KIAA1328Q86T90 577 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms