RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 MARCKSP29966 332 aaPredicted RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 ARHGAP45Q92619 1136 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 EVI5LQ96CN4 794 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 NEK1Q96PY6 1258 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 VAT1LQ9HCJ6 419 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 MSH6P52701 1360 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 IGHMBP2P38935 993 aaKnown RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 CEP57L1Q8IYX8 460 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 ZNF594Q96JF6 807 aaPredicted RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 ORC3Q9UBD5 711 aaPredicted RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 CTDP1Q9Y5B0 961 aaPredicted RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 PTCH1Q13635 1447 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 C17orf53Q8N3J3 647 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 CCDC47Q96A33 483 aaKnown RBP10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 ZSWIM4Q9H7M6 989 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 LETM1O95202 739 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 ZNF165P49910 485 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 KRT32Q14532 448 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 CCDC183Q5T5S1 534 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 USP26Q9BXU7 913 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 DACT1Q9NYF0 836 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.65□□□□□ -0.79e-7■□□□□ 10
SMARCA1-202ENST00000371122 V9GYY5 206 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 PTPRUQ92729 1446 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 FAM89AQ96GI7 184 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 FAM227BQ96M60 508 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 CTNNA3Q9UI47 895 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 IGSF3O75054 1194 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 CHMLP26374 656 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 ERCC4Q92889 916 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 CCDC43Q96MW1 224 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 PHF23Q9BUL5 403 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 GNL3LQ9NVN8 582 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 OTUD7BQ6GQQ9 843 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 BICC1Q9H694 974 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 HOXC9P31274 260 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 TFCP2Q12800 502 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 TRERF1Q96PN7 1200 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 TANGO6Q9C0B7 1094 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 NCOA3Q9Y6Q9 1424 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 NALCNQ8IZF0 1738 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 A1BGP04217 495 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 KRT18P05783 430 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 ZFYVE27Q5T4F4 411 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 NBPF6Q5VWK0 638 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 JMYQ8N9B5 988 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 NBPF4Q96M43 638 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 CWC25Q9NXE8 425 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 KLF18A0A0U1RQI7 1052 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 ERICH4A6NGS2 130 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 KSR2Q6VAB6 950 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 Q6ZUG5 572 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 CDK5RAP3Q96JB5 506 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 RRAGDQ9NQL2 400 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 ANKIB1Q9P2G1 1089 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 RNF123Q5XPI4 1314 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 APOBRQ0VD83 1088 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 CLIP2Q9UDT6 1046 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 CD2BP2O95400 341 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 MIGA1Q8NAN2 632 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 NGLY1Q96IV0 654 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 ZKSCAN3Q9BRR0 538 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 NCOA5Q9HCD5 579 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 USP19O94966 1318 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 NSD2O96028 1365 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 EXOC5O00471 708 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 ZSCAN22P10073 491 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 EPS15P42566 896 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 SLC26A6Q9BXS9 759 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 SCAND2PQ9GZW5 306 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 DNAJC25Q9H1X3 360 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 TOPAZ1Q8N9V7 1692 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 CCAR1Q8IX12 1150 aaKnown RBP10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 FAM193AP78312 1265 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 ANKRD18BA2A2Z9 1011 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 GOLGA8AA7E2F4 631 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 MPHOSPH10O00566 681 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 GSPT1P15170 499 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 SLC9C2Q5TAH2 1124 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 PPFIBP1Q86W92 1011 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 MKNK2Q9HBH9 465 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 SH2B1Q9NRF2 756 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 RNF216Q9NWF9 866 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 PALD1Q9ULE6 856 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 SLC12A7Q9Y666 1083 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 FAM135BQ49AJ0 1406 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 YTHDC2Q9H6S0 1430 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 SYT1P21579 422 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 TMEM67Q5HYA8 995 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 SIRT1Q96EB6 747 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 TBX22Q9Y458 520 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 F8W031 263 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 GADD45BO75293 160 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 URI1O94763 535 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms