RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 DISP3Q9P2K9 1392 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 CETN1Q12798 172 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 CCDC183Q5T5S1 534 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 GOLGA6L10A0A0M3HER8 536 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 AMPD3Q01432 767 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 GRIN2AQ12879 1464 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 GOLGA6L7A0A1B0GV03 622 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 LMAN1P49257 510 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 LMTK3Q96Q04 1460 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 KLF18A0A0U1RQI7 1052 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 HMGN5P82970 282 aaKnown RBP9.83□□□□□ -0.84
ABCA4-201ENST00000370225 ATP2B3Q16720 1220 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 CHST3Q7LGC8 479 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 HOOK3Q86VS8 718 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 PA2G4Q9UQ80 394 aaKnown RBP9.83□□□□□ -0.84
ABCA4-201ENST00000370225 PRXQ9BXM0 1461 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 CCDC174Q6PII3 467 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 JDP2Q8WYK2 163 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 URI1O94763 535 aaPredicted RBP9.83□□□□□ -0.84
ABCA4-201ENST00000370225 SCAND2PQ9GZW5 306 aaPredicted RBP9.83□□□□□ -0.84
ABCA4-201ENST00000370225 ABCC11Q96J66 1382 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 UQCRFS1P1P0C7P4 283 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 NF2P35240 595 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 LMBR1LQ6UX01 489 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 TBC1D9Q6ZT07 1266 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 EXOC1Q9NV70 894 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 NPHP3Q7Z494 1330 aa9.83□□□□□ -0.84
ABCA4-201ENST00000370225 GNPATO15228 680 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 PHACTR2O75167 634 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 TMC6Q7Z403 805 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 SMARCC2Q8TAQ2 1214 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 SAP30BPQ9UHR5 308 aaKnown RBP9.82□□□□□ -0.84
ABCA4-201ENST00000370225 CUL7Q14999 1698 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 MAGEB6P1A0A0J9YX57 407 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 NBPF14Q5TI25 921 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 IL27Q8NEV9 243 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 YEATS4O95619 227 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 PKD2L1Q9P0L9 805 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 IL2RBP14784 551 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 SLC9C2Q5TAH2 1124 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 WDR7Q9Y4E6 1490 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 MAGEB6Q8N7X4 407 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 CRACR2AQ9BSW2 395 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 ZC3H12CQ9C0D7 883 aaKnown RBP9.82□□□□□ -0.84
ABCA4-201ENST00000370225 LMOD1P29536 600 aaPredicted RBP9.82□□□□□ -0.84
ABCA4-201ENST00000370225 MCM5P33992 734 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 NAPAP54920 295 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 BTG4Q9NY30 223 aa9.82□□□□□ -0.84
ABCA4-201ENST00000370225 MRPS9P82933 396 aaKnown RBP9.81□□□□□ -0.84
ABCA4-201ENST00000370225 PTPN14Q15678 1187 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 STXBP4Q6ZWJ1 553 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 UBXN4Q92575 508 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 MEIS3Q99687 375 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 GJC1P36383 396 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 TTC21AQ8NDW8 1320 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 NCOA1Q15788 1441 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 HMGXB3Q12766 1538 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 SCAF11Q99590 1463 aaKnown RBP9.81□□□□□ -0.84
ABCA4-201ENST00000370225 USO1O60763 962 aaKnown RBP9.81□□□□□ -0.84
ABCA4-201ENST00000370225 PRKG1Q13976 671 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 ZGPATQ8N5A5 531 aaKnown RBP9.81□□□□□ -0.84
ABCA4-201ENST00000370225 NYXQ9GZU5 481 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 C14orf93Q9H972 538 aaKnown RBP9.81□□□□□ -0.84
ABCA4-201ENST00000370225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.81□□□□□ -0.84
ABCA4-201ENST00000370225 STAT6P42226 847 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 TRIM47Q96LD4 638 aa9.81□□□□□ -0.84
ABCA4-201ENST00000370225 RBM27Q9P2N5 1060 aaKnown RBP9.81□□□□□ -0.84
ABCA4-201ENST00000370225 ZSCAN12O43309 604 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 HLTFQ14527 1009 aaKnown RBP eCLIP9.8□□□□□ -0.84
ABCA4-201ENST00000370225 BRF1Q92994 677 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 MCM9Q9NXL9 1143 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 CCDC24Q8N4L8 307 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 TCHPQ9BT92 498 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 ZBTB43O43298 467 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 STX6O43752 255 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 RTN1Q16799 776 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 RAB3GAP1Q15042 981 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 RHPN1Q8TCX5 695 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 KRT23Q9C075 422 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 MRVI1Q9Y6F6 885 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 TMEM110-MUSTN1A8MSY1 372 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 TPTE2Q6XPS3 522 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 SMARCC1Q92922 1105 aaPredicted RBP9.8□□□□□ -0.84
ABCA4-201ENST00000370225 ALG1Q9BT22 464 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 IRS4O14654 1257 aaPredicted RBP9.8□□□□□ -0.84
ABCA4-201ENST00000370225 RXRAP19793 462 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 CWF19L2Q2TBE0 894 aaKnown RBP9.8□□□□□ -0.84
ABCA4-201ENST00000370225 USP25Q9UHP3 1055 aa9.8□□□□□ -0.84
ABCA4-201ENST00000370225 PABPN1LA6NDY0 278 aaKnown RBP9.79□□□□□ -0.84
ABCA4-201ENST00000370225 GRM8O00222 908 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 ARL1P40616 181 aaPredicted RBP9.79□□□□□ -0.84
ABCA4-201ENST00000370225 RRAGBQ5VZM2 374 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 TMCO3Q6UWJ1 677 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 ESR2Q92731 530 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 CIZ1Q9ULV3 898 aaPredicted RBP9.79□□□□□ -0.84
ABCA4-201ENST00000370225 CCDC66A2RUB6 948 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 MARCKSP29966 332 aaPredicted RBP9.79□□□□□ -0.84
ABCA4-201ENST00000370225 PLIN2Q99541 437 aa9.79□□□□□ -0.84
ABCA4-201ENST00000370225 DHX29Q7Z478 1369 aaKnown RBP9.79□□□□□ -0.84
ABCA4-201ENST00000370225 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms