RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 RPSAP08865 295 aaKnown RBP9.79□□□□□ -0.84
LCA5-201ENST00000369846 VAV2P52735 878 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 CCDC129Q6ZRS4 1044 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 CEP128Q6ZU80 1094 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 VPS36Q86VN1 386 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 TTC5Q8N0Z6 440 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 EHBP1Q8NDI1 1231 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 MRFAP1L1Q96HT8 127 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 KIF14Q15058 1648 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 SRGAP3O43295 1099 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 TUBBP07437 444 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 VIMP08670 466 aaKnown RBP9.79□□□□□ -0.84
LCA5-201ENST00000369846 MTIF2P46199 727 aaKnown RBP9.79□□□□□ -0.84
LCA5-201ENST00000369846 FLIIQ13045 1269 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 TMCO4Q5TGY1 634 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 APBB1IPQ7Z5R6 666 aaPredicted RBP9.79□□□□□ -0.84
LCA5-201ENST00000369846 RPUSD2Q8IZ73 545 aaKnown RBP9.79□□□□□ -0.84
LCA5-201ENST00000369846 CTCFLQ8NI51 663 aaPredicted RBP9.79□□□□□ -0.84
LCA5-201ENST00000369846 CNKSR2Q8WXI2 1034 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 EFCC1Q9HA90 598 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 DNM1Q05193 864 aaKnown RBP9.79□□□□□ -0.84
LCA5-201ENST00000369846 FAM69CQ0P6D2 419 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 KIAA0753Q2KHM9 967 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 BMP2KLQ5H9B9 411 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 AACSQ86V21 672 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 CCDC50Q8IVM0 306 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 VCXQ9H320 206 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 GUCA1BQ9UMX6 200 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 TBC1D2BQ9UPU7 963 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 MRFAP1Q9Y605 127 aa9.79□□□□□ -0.84
LCA5-201ENST00000369846 RALGAPBQ86X10 1494 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 BIRC2Q13490 618 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 CACNA2D3Q8IZS8 1091 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 CEP120Q8N960 986 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 CWC25Q9NXE8 425 aaPredicted RBP9.78□□□□□ -0.84
LCA5-201ENST00000369846 RRP15Q9Y3B9 282 aaKnown RBP9.78□□□□□ -0.84
LCA5-201ENST00000369846 ANKRD50Q9ULJ7 1429 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 CETN3O15182 167 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 POLR3DP05423 398 aaPredicted RBP9.78□□□□□ -0.84
LCA5-201ENST00000369846 RARSP54136 660 aaKnown RBP9.78□□□□□ -0.84
LCA5-201ENST00000369846 ERCC6LQ2NKX8 1250 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 TSNAXIP1Q2TAA8 658 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 CCDC170Q8IYT3 715 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 STMN2Q93045 179 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 TBC1D31Q96DN5 1066 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 SLC24A3Q9HC58 644 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 IFNKQ9P0W0 207 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 DNMT1P26358 1616 aaKnown RBP9.78□□□□□ -0.84
LCA5-201ENST00000369846 CCT2P78371 535 aaKnown RBP9.78□□□□□ -0.84
LCA5-201ENST00000369846 TRIM68Q6AZZ1 485 aa9.78□□□□□ -0.84
LCA5-201ENST00000369846 ZGPATQ8N5A5 531 aaKnown RBP9.78□□□□□ -0.84
LCA5-201ENST00000369846 PPP1R14CQ8TAE6 165 aa9.77□□□□□ -0.84
LCA5-201ENST00000369846 ZNF215Q9UL58 517 aaPredicted RBP9.77□□□□□ -0.84
LCA5-201ENST00000369846 ZBTB22O15209 634 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 CAMSAP2Q08AD1 1489 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 SETDB1Q15047 1291 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 CCDC30Q5VVM6 783 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 IFT74Q96LB3 600 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 LOC102724159A0A0B4J2E5 919 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 NOL3O60936 208 aaKnown RBP9.77□□□□□ -0.85
LCA5-201ENST00000369846 TRIM21P19474 475 aaKnown RBP9.77□□□□□ -0.85
LCA5-201ENST00000369846 PWP2Q15269 919 aaKnown RBP9.77□□□□□ -0.85
LCA5-201ENST00000369846 ICE2Q659A1 982 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 SMC5Q8IY18 1101 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 TESK2Q96S53 571 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 SPG7Q9UQ90 795 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 RIPOR2Q9Y4F9 1068 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 VGFO15240 615 aaPredicted RBP9.77□□□□□ -0.85
LCA5-201ENST00000369846 ZNF500O60304 480 aaPredicted RBP9.77□□□□□ -0.85
LCA5-201ENST00000369846 ZNF365Q70YC5 407 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 NECAB1Q8N987 351 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 SSH1Q8WYL5 1049 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 GDAP1L1Q96MZ0 367 aa9.77□□□□□ -0.85
LCA5-201ENST00000369846 CTDP1Q9Y5B0 961 aaPredicted RBP9.77□□□□□ -0.85
LCA5-201ENST00000369846 TUBB4BP68371 445 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 IKQ13123 557 aaPredicted RBP9.76□□□□□ -0.85
LCA5-201ENST00000369846 CCDC102BQ68D86 513 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 ODF2LQ9ULJ1 636 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 ERCC3P19447 782 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 CCT4P50991 539 aaKnown RBP9.76□□□□□ -0.85
LCA5-201ENST00000369846 E2F5Q15329 346 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 TTC14Q96N46 770 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 GBP5Q96PP8 586 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 JPH2Q9BR39 696 aaPredicted RBP9.76□□□□□ -0.85
LCA5-201ENST00000369846 KCNK9Q9NPC2 374 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 CHMP4BP1P59074 171 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 ANAPC15P60006 121 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 NEDD9Q14511 834 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 RASIP1Q5U651 963 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 SPTY2D1Q68D10 685 aaPredicted RBP9.76□□□□□ -0.85
LCA5-201ENST00000369846 INTS8Q75QN2 995 aaKnown RBP9.76□□□□□ -0.85
LCA5-201ENST00000369846 SNX21Q969T3 373 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 WDR62O43379 1518 aa9.76□□□□□ -0.85
LCA5-201ENST00000369846 CYLC1P35663 651 aaPredicted RBP9.75□□□□□ -0.85
LCA5-201ENST00000369846 RAB11FIP4Q86YS3 637 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 HOMEZQ8IX15 550 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 SMIM24O75264 130 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 CCDC57Q2TAC2 916 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms