RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ZC3H4Q9UPT8 1303 aaKnown RBP11.16□□□□□ -0.62
SNX27-201ENST00000368838 DDNO94850 711 aaPredicted RBP11.15□□□□□ -0.62
SNX27-201ENST00000368838 MYL6BP14649 208 aa11.15□□□□□ -0.62
SNX27-201ENST00000368838 TTLL7Q6ZT98 887 aa11.15□□□□□ -0.62
SNX27-201ENST00000368838 KLRG1Q96E93 195 aa11.15□□□□□ -0.62
SNX27-201ENST00000368838 SMC4Q9NTJ3 1288 aa11.15□□□□□ -0.62
SNX27-201ENST00000368838 TSPYL4Q9UJ04 414 aa11.15□□□□□ -0.62
SNX27-201ENST00000368838 ZNF652Q9Y2D9 606 aa11.15□□□□□ -0.62
SNX27-201ENST00000368838 CACNA1FO60840 1977 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 POTEJP0CG39 1038 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 GPTP24298 496 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 GTF2E1P29083 439 aaPredicted RBP11.14□□□□□ -0.63
SNX27-201ENST00000368838 EIF4A1P60842 406 aaKnown RBP11.14□□□□□ -0.63
SNX27-201ENST00000368838 DPY19L2Q6NUT2 758 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 SLC51AQ86UW1 340 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 NUTM1Q86Y26 1132 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 TSPYL6Q8N831 410 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 API5Q9BZZ5 524 aaKnown RBP11.14□□□□□ -0.63
SNX27-201ENST00000368838 ZBTB3Q9H5J0 574 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 PDZRN3Q9UPQ7 1066 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
SNX27-201ENST00000368838 CLEC4GQ6UXB4 293 aa11.13□□□□□ -0.63
SNX27-201ENST00000368838 TPTE2Q6XPS3 522 aa11.13□□□□□ -0.63
SNX27-201ENST00000368838 DZIP1LQ8IYY4 767 aaKnown RBP11.13□□□□□ -0.63
SNX27-201ENST00000368838 ZNF277Q9NRM2 450 aaPredicted RBP11.13□□□□□ -0.63
SNX27-201ENST00000368838 TCERG1O14776 1098 aaKnown RBP11.12□□□□□ -0.63
SNX27-201ENST00000368838 ANXA1P04083 346 aa11.12□□□□□ -0.63
SNX27-201ENST00000368838 TRIM27P14373 513 aa11.12□□□□□ -0.63
SNX27-201ENST00000368838 NPR1P16066 1061 aa11.12□□□□□ -0.63
SNX27-201ENST00000368838 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
SNX27-201ENST00000368838 CCDC30Q5VVM6 783 aa11.12□□□□□ -0.63
SNX27-201ENST00000368838 C7orf43Q8WVR3 580 aa11.12□□□□□ -0.63
SNX27-201ENST00000368838 DDX19BQ9UMR2 479 aa11.12□□□□□ -0.63
SNX27-201ENST00000368838 ABCC4O15439 1325 aa11.12□□□□□ -0.63
SNX27-201ENST00000368838 ZNF541Q9H0D2 1346 aa11.12□□□□□ -0.63
SNX27-201ENST00000368838 PLIN1O60240 522 aa11.11□□□□□ -0.63
SNX27-201ENST00000368838 CCDC93Q567U6 631 aa11.11□□□□□ -0.63
SNX27-201ENST00000368838 EXOC6Q8TAG9 804 aa11.11□□□□□ -0.63
SNX27-201ENST00000368838 CRBNQ96SW2 442 aa11.11□□□□□ -0.63
SNX27-201ENST00000368838 LAS1LQ9Y4W2 734 aaKnown RBP11.11□□□□□ -0.63
SNX27-201ENST00000368838 COL4A5P29400 1685 aa11.11□□□□□ -0.63
SNX27-201ENST00000368838 LTBP3Q9NS15 1303 aa11.11□□□□□ -0.63
SNX27-201ENST00000368838 EIF2S2P20042 333 aaKnown RBP11.1□□□□□ -0.63
SNX27-201ENST00000368838 C20orf194Q5TEA3 1177 aa11.1□□□□□ -0.63
SNX27-201ENST00000368838 INTS3Q68E01 1043 aaKnown RBP11.1□□□□□ -0.63
SNX27-201ENST00000368838 KIF6Q6ZMV9 814 aa11.1□□□□□ -0.63
SNX27-201ENST00000368838 REM2Q8IYK8 340 aaPredicted RBP11.1□□□□□ -0.63
SNX27-201ENST00000368838 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
SNX27-201ENST00000368838 NECTIN2Q92692 538 aa11.1□□□□□ -0.63
SNX27-201ENST00000368838 NOB1Q9ULX3 412 aaKnown RBP11.1□□□□□ -0.63
SNX27-201ENST00000368838 LTBP1Q14766 1721 aa11.1□□□□□ -0.63
SNX27-201ENST00000368838 ERBB4Q15303 1308 aa11.1□□□□□ -0.63
SNX27-201ENST00000368838 MAP3K15Q6ZN16 1313 aa11.1□□□□□ -0.63
SNX27-201ENST00000368838 UBN2Q6ZU65 1347 aa11.1□□□□□ -0.63
SNX27-201ENST00000368838 FKBP4Q02790 459 aaKnown RBP eCLIP11.09□□□□□ -0.63
SNX27-201ENST00000368838 PROSER3Q2NL68 480 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 EAPPQ56P03 285 aaPredicted RBP11.09□□□□□ -0.63
SNX27-201ENST00000368838 COL13A1Q5TAT6 717 aaPredicted RBP11.09□□□□□ -0.63
SNX27-201ENST00000368838 SOGA3Q5TF21 947 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 SUSD4Q5VX71 490 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 C3orf67Q6ZVT6 689 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 JMYQ8N9B5 988 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 CLUAP1Q96AJ1 413 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 CCDC136Q96JN2 1154 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
SNX27-201ENST00000368838 TRPM7Q96QT4 1865 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 DDX60Q8IY21 1712 aaKnown RBP11.09□□□□□ -0.63
SNX27-201ENST00000368838 ADAMTSL1Q8N6G6 1762 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 KLRG2A4D1S0 409 aaPredicted RBP11.09□□□□□ -0.63
SNX27-201ENST00000368838 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 SYNE4Q8N205 404 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 STK31Q9BXU1 1019 aa11.09□□□□□ -0.63
SNX27-201ENST00000368838 POLR2AP24928 1970 aaKnown RBP11.08□□□□□ -0.64
SNX27-201ENST00000368838 RLBP1P12271 317 aa11.08□□□□□ -0.64
SNX27-201ENST00000368838 IARSP41252 1262 aaKnown RBP11.08□□□□□ -0.64
SNX27-201ENST00000368838 IRX6P78412 446 aaPredicted RBP11.08□□□□□ -0.64
SNX27-201ENST00000368838 KRT24Q2M2I5 525 aa11.08□□□□□ -0.64
SNX27-201ENST00000368838 RPGRQ92834 1020 aaKnown RBP11.08□□□□□ -0.64
SNX27-201ENST00000368838 FRAT1Q92837 279 aaPredicted RBP11.08□□□□□ -0.64
SNX27-201ENST00000368838 ZBTB40Q9NUA8 1239 aa11.08□□□□□ -0.64
SNX27-201ENST00000368838 ERVV-1B6SEH8 477 aa11.07□□□□□ -0.64
SNX27-201ENST00000368838 ZBTB7BO15156 539 aaPredicted RBP11.07□□□□□ -0.64
SNX27-201ENST00000368838 HSPA1AP0DMV8 641 aaKnown RBP11.07□□□□□ -0.64
SNX27-201ENST00000368838 HSPA1BP0DMV9 641 aaKnown RBP11.07□□□□□ -0.64
SNX27-201ENST00000368838 ALDH1B1P30837 517 aa11.07□□□□□ -0.64
SNX27-201ENST00000368838 CENPQQ7L2Z9 268 aaPredicted RBP11.07□□□□□ -0.64
SNX27-201ENST00000368838 FTSJ3Q8IY81 847 aaKnown RBP11.07□□□□□ -0.64
SNX27-201ENST00000368838 NYXQ9GZU5 481 aa11.07□□□□□ -0.64
SNX27-201ENST00000368838 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
SNX27-201ENST00000368838 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
SNX27-201ENST00000368838 GJA3Q9Y6H8 435 aa11.07□□□□□ -0.64
SNX27-201ENST00000368838 SNED1Q8TER0 1413 aa11.06□□□□□ -0.64
SNX27-201ENST00000368838 NTSR2O95665 410 aa11.06□□□□□ -0.64
SNX27-201ENST00000368838 AIMP1Q12904 312 aaKnown RBP11.06□□□□□ -0.64
SNX27-201ENST00000368838 HDAC1Q13547 482 aaPredicted RBP11.06□□□□□ -0.64
SNX27-201ENST00000368838 PDIA6Q15084 440 aa11.06□□□□□ -0.64
SNX27-201ENST00000368838 TMEM132AQ24JP5 1023 aa11.06□□□□□ -0.64
SNX27-201ENST00000368838 CRY2Q49AN0 593 aa11.06□□□□□ -0.64
SNX27-201ENST00000368838 ZNF34Q8IZ26 560 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms