RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 GNPATO15228 680 aa9.93□□□□□ -0.82
SYNE1-206ENST00000367253 RTEL1Q9NZ71 1219 aa9.93□□□□□ -0.82
SYNE1-206ENST00000367253 FAM83GA6ND36 823 aa9.93□□□□□ -0.82
SYNE1-206ENST00000367253 CHMP2AO43633 222 aa9.93□□□□□ -0.82
SYNE1-206ENST00000367253 ZBTB9Q96C00 473 aa9.93□□□□□ -0.82
SYNE1-206ENST00000367253 AS3MTQ9HBK9 375 aa9.93□□□□□ -0.82
SYNE1-206ENST00000367253 MAGEC2Q9UBF1 373 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-206ENST00000367253 MAPKBP1O60336 1514 aa9.93□□□□□ -0.82
SYNE1-206ENST00000367253 CDKL5O76039 1030 aa9.93□□□□□ -0.82
SYNE1-206ENST00000367253 VIMP08670 466 aaKnown RBP9.93□□□□□ -0.82
SYNE1-206ENST00000367253 CNTROBQ8N137 903 aa9.93□□□□□ -0.82
SYNE1-206ENST00000367253 RNF41Q9H4P4 317 aaPredicted RBP9.92□□□□□ -0.82
SYNE1-206ENST00000367253 FRMD4BQ9Y2L6 1034 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 COMMD10Q9Y6G5 202 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 TMCO3Q6UWJ1 677 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 MIPOL1Q8TD10 442 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 ADRA2BP18089 450 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 NAA25Q14CX7 972 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 WASF1Q92558 559 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 UBXN4Q92575 508 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 GBP3Q9H0R5 595 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 GRPEL1Q9HAV7 217 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 SLAIN2Q9P270 581 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 ERCC6L2Q5T890 1561 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 MBD5Q9P267 1494 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 SULT6B1Q6IMI4 303 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 USP37Q86T82 979 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 FMNL3Q8IVF7 1028 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
SYNE1-206ENST00000367253 SHROOM2Q13796 1616 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 KINO60870 393 aaKnown RBP9.91□□□□□ -0.82
SYNE1-206ENST00000367253 KCNA6P17658 529 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 IQCEQ6IPM2 695 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 DIXDC1Q155Q3 683 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 INTS3Q68E01 1043 aaKnown RBP9.91□□□□□ -0.82
SYNE1-206ENST00000367253 TMED8Q6PL24 325 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-206ENST00000367253 SPATA24Q86W54 205 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 DDX19BQ9UMR2 479 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 ARAP3Q8WWN8 1544 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 CCDC125Q86Z20 511 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 JMYQ8N9B5 988 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 MBIPQ9NS73 344 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 ACEP12821 1306 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 GOLGA6L9A6NEM1 432 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 SLU7O95391 586 aaKnown RBP9.91□□□□□ -0.82
SYNE1-206ENST00000367253 FMNL1O95466 1100 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-206ENST00000367253 FAM98CQ17RN3 349 aaKnown RBP9.91□□□□□ -0.82
SYNE1-206ENST00000367253 CCDC129Q6ZRS4 1044 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 IQCA1Q86XH1 822 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 SPC24Q8NBT2 197 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 BTG4Q9NY30 223 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 RSPH14Q9UHP6 348 aa9.91□□□□□ -0.82
SYNE1-206ENST00000367253 MYO5CQ9NQX4 1742 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 GNAT3A8MTJ3 354 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 CNGA1P29973 690 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 ZSCAN30Q86W11 494 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 PANK3Q9H999 370 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 RAD50Q92878 1312 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 TSPY2A6NKD2 308 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 TSPY3P0CV98 308 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 TSPY8P0CW00 308 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 TSPY1Q01534 308 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 PNMA2Q9UL42 364 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 SUPT20HL1Q3ZLR7 823 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 RUNDC1Q96C34 613 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 ARHGEF10O15013 1369 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 KIF7Q2M1P5 1343 aa9.9□□□□□ -0.82
SYNE1-206ENST00000367253 CAPN15O75808 1086 aa9.9□□□□□ -0.83
SYNE1-206ENST00000367253 GCKP35557 465 aa9.9□□□□□ -0.83
SYNE1-206ENST00000367253 PDE4BQ07343 736 aa9.9□□□□□ -0.83
SYNE1-206ENST00000367253 ZBED9Q6R2W3 1325 aa9.9□□□□□ -0.83
SYNE1-206ENST00000367253 ADCY10Q96PN6 1610 aa9.9□□□□□ -0.83
SYNE1-206ENST00000367253 SURF6O75683 361 aaKnown RBP9.89□□□□□ -0.83
SYNE1-206ENST00000367253 IDH1O75874 414 aaKnown RBP9.89□□□□□ -0.83
SYNE1-206ENST00000367253 SSBP05455 408 aaKnown RBP eCLIP9.89□□□□□ -0.83
SYNE1-206ENST00000367253 CRACR2AQ9BSW2 395 aa9.89□□□□□ -0.83
SYNE1-206ENST00000367253 ZBED2Q9BTP6 218 aa9.89□□□□□ -0.83
SYNE1-206ENST00000367253 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-206ENST00000367253 RIOK3O14730 519 aaKnown RBP9.89□□□□□ -0.83
SYNE1-206ENST00000367253 UBXN2AP68543 259 aa9.89□□□□□ -0.83
SYNE1-206ENST00000367253 FBXO41Q8TF61 875 aa9.89□□□□□ -0.83
SYNE1-206ENST00000367253 CETN1Q12798 172 aa9.89□□□□□ -0.83
SYNE1-206ENST00000367253 CTCFLQ8NI51 663 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-206ENST00000367253 ZCCHC11Q5TAX3 1644 aaKnown RBP9.89□□□□□ -0.83
SYNE1-206ENST00000367253 ORC3Q9UBD5 711 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-206ENST00000367253 NR2E3Q9Y5X4 410 aa9.89□□□□□ -0.83
SYNE1-206ENST00000367253 CCDC196A0A1B0GTZ2 297 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 KIF2AO00139 706 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-206ENST00000367253 CCDC192P0DO97 292 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 CHRNA2Q15822 529 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 CC2D2BQ6DHV5 1058 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 MYD88Q99836 296 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 SPATS2LQ9NUQ6 558 aaKnown RBP9.88□□□□□ -0.83
SYNE1-206ENST00000367253 TMEM266Q2M3C6 531 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 MAP7D1Q3KQU3 841 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 ATG3Q9NT62 314 aa9.88□□□□□ -0.83
SYNE1-206ENST00000367253 NSFL1CQ9UNZ2 370 aaKnown RBP9.88□□□□□ -0.83
SYNE1-206ENST00000367253 PRPF40AO75400 957 aaKnown RBP9.88□□□□□ -0.83
SYNE1-206ENST00000367253 GIGYF1O75420 1035 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms