RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 NEXNQ0ZGT2 675 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 SF3A1Q15459 793 aaKnown RBP9.64□□□□□ -0.87
CD46-208ENST00000367042 ZSCAN25Q6NSZ9 544 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 ZNF589Q86UQ0 364 aaPredicted RBP9.64□□□□□ -0.87
CD46-208ENST00000367042 CHMP4AQ9BY43 222 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 HDAC5Q9UQL6 1122 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 KINO60870 393 aaKnown RBP9.64□□□□□ -0.87
CD46-208ENST00000367042 DDX58O95786 925 aaKnown RBP9.64□□□□□ -0.87
CD46-208ENST00000367042 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
CD46-208ENST00000367042 ARID5BQ14865 1188 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 NBPF6Q5VWK0 638 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 Q6ZUG5 572 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 SYTL4Q96C24 671 aaPredicted RBP9.64□□□□□ -0.87
CD46-208ENST00000367042 SUCLG2Q96I99 432 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 NBPF4Q96M43 638 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 NEUROD6Q96NK8 337 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 SDF4Q9BRK5 362 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 FTOQ9C0B1 505 aaKnown RBP eCLIP9.64□□□□□ -0.87
CD46-208ENST00000367042 USP16Q9Y5T5 823 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 CHGBP05060 677 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 RPS6KB1P23443 525 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 PSME1Q06323 249 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 CEP135Q66GS9 1140 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 TM6SF1Q9BZW5 370 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 GRM8O00222 908 aa9.63□□□□□ -0.87
CD46-208ENST00000367042 DDX46Q7L014 1031 aaKnown RBP9.63□□□□□ -0.87
CD46-208ENST00000367042 CHST3Q7LGC8 479 aa9.63□□□□□ -0.87
CD46-208ENST00000367042 CACTINQ8WUQ7 758 aaKnown RBP9.63□□□□□ -0.87
CD46-208ENST00000367042 NEK1Q96PY6 1258 aa9.63□□□□□ -0.87
CD46-208ENST00000367042 GTF2F1P35269 517 aaKnown RBP eCLIP9.63□□□□□ -0.87
CD46-208ENST00000367042 PTPN14Q15678 1187 aa9.63□□□□□ -0.87
CD46-208ENST00000367042 GORABQ5T7V8 394 aa9.63□□□□□ -0.87
CD46-208ENST00000367042 CCAR1Q8IX12 1150 aaKnown RBP9.63□□□□□ -0.87
CD46-208ENST00000367042 MAP4K1Q92918 833 aa9.63□□□□□ -0.87
CD46-208ENST00000367042 SEC62Q99442 399 aaKnown RBP9.63□□□□□ -0.87
CD46-208ENST00000367042 CLSTN2Q9H4D0 955 aa9.63□□□□□ -0.87
CD46-208ENST00000367042 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.63□□□□□ -0.87
CD46-208ENST00000367042 SMC2O95347 1197 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 SKILP12757 684 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 SLC39A6Q13433 755 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 PLEKHO1Q53GL0 409 aaPredicted RBP9.62□□□□□ -0.87
CD46-208ENST00000367042 KSR2Q6VAB6 950 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 CFAP45Q9UL16 551 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 TBX22Q9Y458 520 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 ADAMTSL3P82987 1691 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 SASH1O94885 1247 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 MYD88Q99836 296 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 KDRP35968 1356 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 ZNF142P52746 1687 aaPredicted RBP9.62□□□□□ -0.87
CD46-208ENST00000367042 SMTNL1A8MU46 457 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 NCBP1Q09161 790 aaKnown RBP9.62□□□□□ -0.87
CD46-208ENST00000367042 CCDC144BQ3MJ40 725 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 ESCO1Q5FWF5 840 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 CCDC144CPQ8IYA2 1237 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 NALCNQ8IZF0 1738 aa9.62□□□□□ -0.87
CD46-208ENST00000367042 RGPD8O14715 1765 aaPredicted RBP9.62□□□□□ -0.87
CD46-208ENST00000367042 USP31Q70CQ4 1352 aa9.61□□□□□ -0.87
CD46-208ENST00000367042 BIN1O00499 593 aa9.61□□□□□ -0.87
CD46-208ENST00000367042 ISM2Q6H9L7 571 aa9.61□□□□□ -0.87
CD46-208ENST00000367042 RAB11FIP4Q86YS3 637 aa9.61□□□□□ -0.87
CD46-208ENST00000367042 PGBD1Q96JS3 809 aa9.61□□□□□ -0.87
CD46-208ENST00000367042 TOB2Q14106 344 aaPredicted RBP9.61□□□□□ -0.87
CD46-208ENST00000367042 C11orf57Q6ZUT1 292 aaPredicted RBP9.61□□□□□ -0.87
CD46-208ENST00000367042 NCOA5Q9HCD5 579 aaKnown RBP9.61□□□□□ -0.87
CD46-208ENST00000367042 CGNQ9P2M7 1197 aaKnown RBP9.61□□□□□ -0.87
CD46-208ENST00000367042 ERICH4A6NGS2 130 aa9.61□□□□□ -0.87
CD46-208ENST00000367042 APOBRQ0VD83 1088 aa9.61□□□□□ -0.87
CD46-208ENST00000367042 HOMER1Q86YM7 354 aa9.61□□□□□ -0.87
CD46-208ENST00000367042 THEMISQ8N1K5 641 aaPredicted RBP9.61□□□□□ -0.87
CD46-208ENST00000367042 AOPEPQ8N6M6 819 aa9.61□□□□□ -0.87
CD46-208ENST00000367042 FSIP1Q8NA03 581 aa9.61□□□□□ -0.87
CD46-208ENST00000367042 CCDC69A6NI79 296 aa9.6□□□□□ -0.87
CD46-208ENST00000367042 ATP5J2-PTCD1G3V325 749 aa9.6□□□□□ -0.87
CD46-208ENST00000367042 PTCD1O75127 700 aaKnown RBP9.6□□□□□ -0.87
CD46-208ENST00000367042 GTPBP4Q9BZE4 634 aaKnown RBP9.6□□□□□ -0.87
CD46-208ENST00000367042 ADCY9O60503 1353 aa9.6□□□□□ -0.87
CD46-208ENST00000367042 USP27XA6NNY8 438 aa9.6□□□□□ -0.87
CD46-208ENST00000367042 ALDH1L1O75891 902 aa9.6□□□□□ -0.87
CD46-208ENST00000367042 KRT32Q14532 448 aa9.6□□□□□ -0.87
CD46-208ENST00000367042 SLFNL1Q499Z3 407 aa9.6□□□□□ -0.87
CD46-208ENST00000367042 PAXBP1Q9Y5B6 917 aa9.6□□□□□ -0.87
CD46-208ENST00000367042 POLR3DP05423 398 aaPredicted RBP9.59□□□□□ -0.87
CD46-208ENST00000367042 KCNA6P17658 529 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 STX1AQ16623 288 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 UBE3BQ7Z3V4 1068 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 LINS1Q8NG48 757 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 ZNF330Q9Y3S2 320 aaPredicted RBP9.59□□□□□ -0.87
CD46-208ENST00000367042 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 ELP1O95163 1332 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 NRDCO43847 1150 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 TFCP2Q12800 502 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 CEP57L1Q8IYX8 460 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 GTF3C6Q969F1 213 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 HMG20BQ9P0W2 317 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 ZNF215Q9UL58 517 aaPredicted RBP9.59□□□□□ -0.87
CD46-208ENST00000367042 GOLIM4O00461 696 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 AKAP4Q5JQC9 854 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 OTUD7BQ6GQQ9 843 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 LRRC8AQ8IWT6 810 aa9.59□□□□□ -0.87
CD46-208ENST00000367042 FAM177A1Q8N128 213 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms