RNA–Protein interactions for RNA: ENST00000364587.1

SNORA55-201, Transcript of small nucleolar RNA, H/ACA box 55, humanhuman

BASIC

Gene SNORA55, Length 135 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA55-201ENST00000364587 CFHR5Q9BXR6 569 aa12.04□□□□□ -0.48
SNORA55-201ENST00000364587 RTFDC1Q9BY42 306 aaPredicted RBP12.04□□□□□ -0.48
SNORA55-201ENST00000364587 NYXQ9GZU5 481 aa12.04□□□□□ -0.48
SNORA55-201ENST00000364587 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
SNORA55-201ENST00000364587 CEP290O15078 2479 aa12.03□□□□□ -0.48
SNORA55-201ENST00000364587 EGFRP00533 1210 aa12.03□□□□□ -0.48
SNORA55-201ENST00000364587 KIAA2012Q0VF49 1180 aa12.03□□□□□ -0.48
SNORA55-201ENST00000364587 CDCA5Q96FF9 252 aa12.03□□□□□ -0.48
SNORA55-201ENST00000364587 R3HDMLQ9H3Y0 253 aa12.03□□□□□ -0.48
SNORA55-201ENST00000364587 PTPN22Q9Y2R2 807 aa12.03□□□□□ -0.48
SNORA55-201ENST00000364587 ATP6V0A2Q9Y487 856 aa12.03□□□□□ -0.48
SNORA55-201ENST00000364587 USP16Q9Y5T5 823 aa12.03□□□□□ -0.48
SNORA55-201ENST00000364587 TEFQ10587 303 aa12.02□□□□□ -0.49
SNORA55-201ENST00000364587 SREBF2Q12772 1141 aa12.02□□□□□ -0.49
SNORA55-201ENST00000364587 MTHFSDQ2M296 383 aaKnown RBP12.02□□□□□ -0.49
SNORA55-201ENST00000364587 DPP8Q6V1X1 898 aaPredicted RBP12.02□□□□□ -0.49
SNORA55-201ENST00000364587 ARMC5Q96C12 935 aa12.02□□□□□ -0.49
SNORA55-201ENST00000364587 COL25A1Q9BXS0 654 aaPredicted RBP12.02□□□□□ -0.49
SNORA55-201ENST00000364587 RANBP2P49792 3224 aaKnown RBP12.02□□□□□ -0.49
SNORA55-201ENST00000364587 RBBP6Q7Z6E9 1792 aaKnown RBP12.02□□□□□ -0.49
SNORA55-201ENST00000364587 YDJCA8MPS7 323 aa12.01□□□□□ -0.49
SNORA55-201ENST00000364587 IL13P35225 146 aa12.01□□□□□ -0.49
SNORA55-201ENST00000364587 HLFQ16534 295 aa12.01□□□□□ -0.49
SNORA55-201ENST00000364587 ABCC12Q96J65 1359 aa12.01□□□□□ -0.49
SNORA55-201ENST00000364587 PSMD14O00487 310 aa12□□□□□ -0.49
SNORA55-201ENST00000364587 MPNDQ8N594 471 aa12□□□□□ -0.49
SNORA55-201ENST00000364587 GGA3Q9NZ52 723 aa12□□□□□ -0.49
SNORA55-201ENST00000364587 UBE2Q2LH0YL09 131 aa11.99□□□□□ -0.49
SNORA55-201ENST00000364587 ALDH1A1P00352 501 aa11.99□□□□□ -0.49
SNORA55-201ENST00000364587 RPS12P25398 132 aaKnown RBP11.99□□□□□ -0.49
SNORA55-201ENST00000364587 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
SNORA55-201ENST00000364587 KIF4BQ2VIQ3 1234 aa11.99□□□□□ -0.49
SNORA55-201ENST00000364587 SLC4A8Q2Y0W8 1093 aa11.99□□□□□ -0.49
SNORA55-201ENST00000364587 MOB2Q70IA6 237 aa11.99□□□□□ -0.49
SNORA55-201ENST00000364587 DPF3Q92784 378 aa11.99□□□□□ -0.49
SNORA55-201ENST00000364587 RIC1Q4ADV7 1423 aa11.99□□□□□ -0.49
SNORA55-201ENST00000364587 HMOX1P09601 288 aa11.98□□□□□ -0.49
SNORA55-201ENST00000364587 SP8Q8IXZ3 490 aa11.98□□□□□ -0.49
SNORA55-201ENST00000364587 NBPF11Q86T75 865 aa11.97□□□□□ -0.49
SNORA55-201ENST00000364587 IL17REQ8NFR9 667 aa11.97□□□□□ -0.49
SNORA55-201ENST00000364587 ERO1AQ96HE7 468 aa11.97□□□□□ -0.49
SNORA55-201ENST00000364587 ZNF333Q96JL9 665 aa11.97□□□□□ -0.49
SNORA55-201ENST00000364587 PRO3102Q9H379 93 aa11.97□□□□□ -0.49
SNORA55-201ENST00000364587 EFCC1Q9HA90 598 aa11.97□□□□□ -0.49
SNORA55-201ENST00000364587 UNC80Q8N2C7 3258 aa11.96□□□□□ -0.49
SNORA55-201ENST00000364587 ASTN2O75129 1339 aaPredicted RBP11.96□□□□□ -0.49
SNORA55-201ENST00000364587 KCNQ3O43525 872 aa11.96□□□□□ -0.49
SNORA55-201ENST00000364587 BBOX1O75936 387 aa11.96□□□□□ -0.49
SNORA55-201ENST00000364587 TTLL12Q14166 644 aaPredicted RBP11.96□□□□□ -0.49
SNORA55-201ENST00000364587 ANGEL2Q5VTE6 544 aaKnown RBP11.96□□□□□ -0.49
SNORA55-201ENST00000364587 ANKRD13DQ6ZTN6 518 aa11.96□□□□□ -0.49
SNORA55-201ENST00000364587 NLRP3Q96P20 1036 aa11.96□□□□□ -0.49
SNORA55-201ENST00000364587 BTBD11A6QL63 1104 aa11.95□□□□□ -0.5
SNORA55-201ENST00000364587 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
SNORA55-201ENST00000364587 SOX1O00570 391 aaPredicted RBP11.95□□□□□ -0.5
SNORA55-201ENST00000364587 SNRPA1P09661 255 aaKnown RBP11.95□□□□□ -0.5
SNORA55-201ENST00000364587 TCIRG1Q13488 830 aa11.95□□□□□ -0.5
SNORA55-201ENST00000364587 SCARF1Q14162 830 aa11.95□□□□□ -0.5
SNORA55-201ENST00000364587 NBPF10Q6P3W6 841 aaKnown RBP11.95□□□□□ -0.5
SNORA55-201ENST00000364587 C3orf67Q6ZVT6 689 aa11.95□□□□□ -0.5
SNORA55-201ENST00000364587 LRCH3Q96II8 777 aa11.95□□□□□ -0.5
SNORA55-201ENST00000364587 A0A1W2PPC1 479 aa11.94□□□□□ -0.5
SNORA55-201ENST00000364587 GNAT3A8MTJ3 354 aa11.94□□□□□ -0.5
SNORA55-201ENST00000364587 INHBEP58166 350 aa11.94□□□□□ -0.5
SNORA55-201ENST00000364587 SUSD4Q5VX71 490 aa11.94□□□□□ -0.5
SNORA55-201ENST00000364587 CD99L2Q8TCZ2 262 aa11.94□□□□□ -0.5
SNORA55-201ENST00000364587 DBNDD1Q9H9R9 158 aa11.94□□□□□ -0.5
SNORA55-201ENST00000364587 ABCC4O15439 1325 aa11.93□□□□□ -0.5
SNORA55-201ENST00000364587 WTIPA6NIX2 430 aaPredicted RBP11.93□□□□□ -0.5
SNORA55-201ENST00000364587 ERVV-1B6SEH8 477 aa11.93□□□□□ -0.5
SNORA55-201ENST00000364587 GPTP24298 496 aa11.93□□□□□ -0.5
SNORA55-201ENST00000364587 WASHC4Q2M389 1173 aa11.93□□□□□ -0.5
SNORA55-201ENST00000364587 SLC9C1Q4G0N8 1177 aa11.93□□□□□ -0.5
SNORA55-201ENST00000364587 MORC1Q86VD1 984 aa11.93□□□□□ -0.5
SNORA55-201ENST00000364587 PRDM6Q9NQX0 595 aa11.93□□□□□ -0.5
SNORA55-201ENST00000364587 STXBP5LQ9Y2K9 1186 aa11.93□□□□□ -0.5
SNORA55-201ENST00000364587 LAMA3Q16787 3333 aa11.93□□□□□ -0.5
SNORA55-201ENST00000364587 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
SNORA55-201ENST00000364587 KCNQ5Q9NR82 932 aa11.92□□□□□ -0.5
SNORA55-201ENST00000364587 IBTKQ9P2D0 1353 aaPredicted RBP11.92□□□□□ -0.5
SNORA55-201ENST00000364587 MANSC4A6NHS7 340 aaPredicted RBP11.91□□□□□ -0.5
SNORA55-201ENST00000364587 RIMBP2O15034 1052 aa11.91□□□□□ -0.5
SNORA55-201ENST00000364587 MYCP01106 439 aaPredicted RBP11.91□□□□□ -0.5
SNORA55-201ENST00000364587 PRAMEF18Q5VWM3 479 aa11.91□□□□□ -0.5
SNORA55-201ENST00000364587 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
SNORA55-201ENST00000364587 NGEFQ8N5V2 710 aa11.91□□□□□ -0.5
SNORA55-201ENST00000364587 DEFB123Q8N688 67 aa11.91□□□□□ -0.5
SNORA55-201ENST00000364587 NR2E3Q9Y5X4 410 aa11.91□□□□□ -0.5
SNORA55-201ENST00000364587 UBN2Q6ZU65 1347 aa11.9□□□□□ -0.5
SNORA55-201ENST00000364587 NTSR2O95665 410 aa11.9□□□□□ -0.5
SNORA55-201ENST00000364587 VIL1P09327 827 aaKnown RBP11.9□□□□□ -0.5
SNORA55-201ENST00000364587 NF2P35240 595 aa11.9□□□□□ -0.5
SNORA55-201ENST00000364587 SP3Q02447 781 aa11.9□□□□□ -0.5
SNORA55-201ENST00000364587 PTPN12Q05209 780 aaKnown RBP11.9□□□□□ -0.5
SNORA55-201ENST00000364587 ARHGEF6Q15052 776 aa11.9□□□□□ -0.5
SNORA55-201ENST00000364587 GPR153Q6NV75 609 aa11.9□□□□□ -0.5
SNORA55-201ENST00000364587 PPP1R42Q7Z4L9 355 aa11.9□□□□□ -0.5
SNORA55-201ENST00000364587 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNORA55-201ENST00000364587 HTATIP2Q9BUP3 242 aa11.9□□□□□ -0.5
SNORA55-201ENST00000364587 ZNF609O15014 1411 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms