RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 DDX21Q9NR30 783 aaKnown RBP eCLIP22.59■■□□□ 1.21
CMTM3-201ENST00000361909 TNS2Q63HR2 1409 aa22.59■■□□□ 1.21
CMTM3-201ENST00000361909 GIMAP6Q6P9H5 292 aa22.58■■□□□ 1.21
CMTM3-201ENST00000361909 SLC4A10Q6U841 1118 aa22.58■■□□□ 1.21
CMTM3-201ENST00000361909 TOGARAM1Q9Y4F4 1720 aa22.58■■□□□ 1.2
CMTM3-201ENST00000361909 PRAMEF22A3QJZ6 481 aa22.57■■□□□ 1.2
CMTM3-201ENST00000361909 FAM177BA6PVY3 158 aa22.57■■□□□ 1.2
CMTM3-201ENST00000361909 FIBPO43427 364 aa22.57■■□□□ 1.2
CMTM3-201ENST00000361909 CREBRFQ8IUR6 639 aa22.57■■□□□ 1.2
CMTM3-201ENST00000361909 UNC5CLQ8IV45 518 aa22.57■■□□□ 1.2
CMTM3-201ENST00000361909 DDX41Q9UJV9 622 aaKnown RBP22.57■■□□□ 1.2
CMTM3-201ENST00000361909 ELP1O95163 1332 aa22.57■■□□□ 1.2
CMTM3-201ENST00000361909 AP5Z1O43299 807 aa22.57■■□□□ 1.2
CMTM3-201ENST00000361909 PLCB2Q00722 1185 aa22.57■■□□□ 1.2
CMTM3-201ENST00000361909 EXOC6BQ9Y2D4 811 aa22.57■■□□□ 1.2
CMTM3-201ENST00000361909 ATP8B2P98198 1209 aa22.56■■□□□ 1.2
CMTM3-201ENST00000361909 ZNF771Q7L3S4 317 aaPredicted RBP22.56■■□□□ 1.2
CMTM3-201ENST00000361909 ZSCAN31Q96LW9 406 aaPredicted RBP22.56■■□□□ 1.2
CMTM3-201ENST00000361909 SH2B1Q9NRF2 756 aaPredicted RBP22.56■■□□□ 1.2
CMTM3-201ENST00000361909 MORC2Q9Y6X9 1032 aaPredicted RBP22.56■■□□□ 1.2
CMTM3-201ENST00000361909 FNBP4Q8N3X1 1017 aaPredicted RBP22.55■■□□□ 1.2
CMTM3-201ENST00000361909 TMOD3Q9NYL9 352 aa22.55■■□□□ 1.2
CMTM3-201ENST00000361909 LAMB4A4D0S4 1761 aa22.55■■□□□ 1.2
CMTM3-201ENST00000361909 GLI3P10071 1580 aa22.55■■□□□ 1.2
CMTM3-201ENST00000361909 PDIA6Q15084 440 aa22.55■■□□□ 1.2
CMTM3-201ENST00000361909 MAP3K11Q16584 847 aa22.55■■□□□ 1.2
CMTM3-201ENST00000361909 CCDC66A2RUB6 948 aa22.54■■□□□ 1.2
CMTM3-201ENST00000361909 SGSM2O43147 1006 aa22.54■■□□□ 1.2
CMTM3-201ENST00000361909 SNX14Q9Y5W7 946 aa22.54■■□□□ 1.2
CMTM3-201ENST00000361909 KCPQ6ZWJ8 1503 aa22.54■■□□□ 1.2
CMTM3-201ENST00000361909 AK2P54819 239 aa22.53■■□□□ 1.2
CMTM3-201ENST00000361909 SPC24Q8NBT2 197 aa22.53■■□□□ 1.2
CMTM3-201ENST00000361909 NGLY1Q96IV0 654 aa22.53■■□□□ 1.2
CMTM3-201ENST00000361909 BCL9LQ86UU0 1499 aa22.53■■□□□ 1.2
CMTM3-201ENST00000361909 CAVIN2O95810 425 aa22.53■■□□□ 1.2
CMTM3-201ENST00000361909 CCDC112Q8NEF3 446 aa22.53■■□□□ 1.2
CMTM3-201ENST00000361909 DNAAF4Q8WXU2 420 aa22.53■■□□□ 1.2
CMTM3-201ENST00000361909 PTGS1P23219 599 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 VPS72Q15906 364 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 DDB1Q16531 1140 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 NUP62CLQ9H1M0 184 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 MTMR6Q9Y217 621 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 USP16Q9Y5T5 823 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 ITGB4P16144 1822 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 PI4KAP2A4QPH2 592 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 RAB11FIP3O75154 756 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 DDX58O95786 925 aaKnown RBP22.52■■□□□ 1.2
CMTM3-201ENST00000361909 CDC25BP30305 580 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 PROSER3Q2NL68 480 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 KSR2Q6VAB6 950 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 RUFY3Q7L099 469 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 PI4KAP1Q8N8J0 262 aa22.52■■□□□ 1.2
CMTM3-201ENST00000361909 ANXA1P04083 346 aa22.51■■□□□ 1.19
CMTM3-201ENST00000361909 TSHZ3Q63HK5 1081 aa22.51■■□□□ 1.19
CMTM3-201ENST00000361909 C8orf37Q96NL8 207 aa22.51■■□□□ 1.19
CMTM3-201ENST00000361909 ADCY9O60503 1353 aa22.51■■□□□ 1.19
CMTM3-201ENST00000361909 NEMFO60524 1076 aa22.5■■□□□ 1.19
CMTM3-201ENST00000361909 TNNT1P13805 278 aa22.5■■□□□ 1.19
CMTM3-201ENST00000361909 KRT85P78386 507 aa22.5■■□□□ 1.19
CMTM3-201ENST00000361909 TYRO3Q06418 890 aa22.5■■□□□ 1.19
CMTM3-201ENST00000361909 VPS53Q5VIR6 699 aa22.5■■□□□ 1.19
CMTM3-201ENST00000361909 PLA2G4DQ86XP0 818 aa22.5■■□□□ 1.19
CMTM3-201ENST00000361909 TM6SF1Q9BZW5 370 aa22.5■■□□□ 1.19
CMTM3-201ENST00000361909 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.5■■□□□ 1.19
CMTM3-201ENST00000361909 DNM1Q05193 864 aaKnown RBP22.49■■□□□ 1.19
CMTM3-201ENST00000361909 BEND3Q5T5X7 828 aa22.49■■□□□ 1.19
CMTM3-201ENST00000361909 PIGBQ92521 554 aa22.49■■□□□ 1.19
CMTM3-201ENST00000361909 LSG1Q9H089 658 aaKnown RBP22.49■■□□□ 1.19
CMTM3-201ENST00000361909 DDX19AQ9NUU7 478 aaKnown RBP22.49■■□□□ 1.19
CMTM3-201ENST00000361909 CCDC9Q9Y3X0 531 aaKnown RBP22.49■■□□□ 1.19
CMTM3-201ENST00000361909 MRVI1Q9Y6F6 885 aa22.49■■□□□ 1.19
CMTM3-201ENST00000361909 BCL9O00512 1426 aa22.49■■□□□ 1.19
CMTM3-201ENST00000361909 RBM43Q6ZSC3 357 aaKnown RBP22.49■■□□□ 1.19
CMTM3-201ENST00000361909 KRT222Q8N1A0 295 aa22.49■■□□□ 1.19
CMTM3-201ENST00000361909 ZNF397Q8NF99 534 aaPredicted RBP22.49■■□□□ 1.19
CMTM3-201ENST00000361909 TDRD7Q8NHU6 1098 aaKnown RBP22.49■■□□□ 1.19
CMTM3-201ENST00000361909 KIF18AQ8NI77 898 aa22.48■■□□□ 1.19
CMTM3-201ENST00000361909 GJB2P29033 226 aa22.48■■□□□ 1.19
CMTM3-201ENST00000361909 HSPA1LP34931 641 aa22.48■■□□□ 1.19
CMTM3-201ENST00000361909 ZNF75DP51815 510 aa22.48■■□□□ 1.19
CMTM3-201ENST00000361909 SLFNL1Q499Z3 407 aa22.48■■□□□ 1.19
CMTM3-201ENST00000361909 ZSCAN25Q6NSZ9 544 aa22.48■■□□□ 1.19
CMTM3-201ENST00000361909 CCDC186Q7Z3E2 898 aa22.48■■□□□ 1.19
CMTM3-201ENST00000361909 LRP10Q7Z4F1 713 aa22.48■■□□□ 1.19
CMTM3-201ENST00000361909 CNTROBQ8N137 903 aa22.48■■□□□ 1.19
CMTM3-201ENST00000361909 SLFN14P0C7P3 912 aa22.47■■□□□ 1.19
CMTM3-201ENST00000361909 TEX13AQ9BXU3 409 aaPredicted RBP22.47■■□□□ 1.19
CMTM3-201ENST00000361909 USP44Q9H0E7 712 aa22.47■■□□□ 1.19
CMTM3-201ENST00000361909 ALDH1L1O75891 902 aa22.46■■□□□ 1.19
CMTM3-201ENST00000361909 PDCP20941 246 aa22.46■■□□□ 1.19
CMTM3-201ENST00000361909 MAP3K2Q9Y2U5 619 aa22.46■■□□□ 1.19
CMTM3-201ENST00000361909 PNMA6EA0A0J9YXQ4 647 aa22.46■■□□□ 1.19
CMTM3-201ENST00000361909 RNF20Q5VTR2 975 aa22.46■■□□□ 1.19
CMTM3-201ENST00000361909 C16orf45Q96MC5 204 aaPredicted RBP22.46■■□□□ 1.19
CMTM3-201ENST00000361909 ATG3Q9NT62 314 aa22.45■■□□□ 1.18
CMTM3-201ENST00000361909 DRC7Q8IY82 874 aa22.45■■□□□ 1.18
CMTM3-201ENST00000361909 SSH3Q8TE77 659 aa22.45■■□□□ 1.18
CMTM3-201ENST00000361909 SCAND2PQ9GZW5 306 aaPredicted RBP22.45■■□□□ 1.18
CMTM3-201ENST00000361909 MYL6BP14649 208 aa22.44■■□□□ 1.18
CMTM3-201ENST00000361909 TERF2Q15554 542 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms