RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 ABCF2Q9UG63 623 aa10.9□□□□□ -0.66
CALD1-202ENST00000361901 XRN1Q8IZH2 1706 aaKnown RBP10.9□□□□□ -0.66
CALD1-202ENST00000361901 LRRC24Q50LG9 513 aa10.9□□□□□ -0.66
CALD1-202ENST00000361901 CHD2O14647 1828 aaKnown RBP10.9□□□□□ -0.67
CALD1-202ENST00000361901 FAM227BQ96M60 508 aa10.9□□□□□ -0.67
CALD1-202ENST00000361901 PUS3Q9BZE2 481 aaKnown RBP10.9□□□□□ -0.67
CALD1-202ENST00000361901 SMC3Q9UQE7 1217 aa10.9□□□□□ -0.67
CALD1-202ENST00000361901 TCIRG1Q13488 830 aa10.89□□□□□ -0.67
CALD1-202ENST00000361901 PDIA6Q15084 440 aa10.89□□□□□ -0.67
CALD1-202ENST00000361901 PDCL2Q8N4E4 241 aa10.89□□□□□ -0.67
CALD1-202ENST00000361901 CCDC191Q8NCU4 936 aa10.89□□□□□ -0.67
CALD1-202ENST00000361901 TMEM51Q9NW97 253 aa10.89□□□□□ -0.67
CALD1-202ENST00000361901 NMIQ13287 307 aaPredicted RBP10.89□□□□□ -0.67
CALD1-202ENST00000361901 HLFQ16534 295 aa10.89□□□□□ -0.67
CALD1-202ENST00000361901 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
CALD1-202ENST00000361901 TRIM34Q9BYJ4 488 aa10.89□□□□□ -0.67
CALD1-202ENST00000361901 IGHMBP2P38935 993 aaKnown RBP10.89□□□□□ -0.67
CALD1-202ENST00000361901 LOC102724428A0A0B4J2F2 783 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 GOLGA6L4A6NEF3 574 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 HIP1O00291 1037 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 SIK1P57059 783 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 CCDC129Q6ZRS4 1044 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 CYP46A1Q9Y6A2 500 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 GNPATO15228 680 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 SSFA2P28290 1259 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 TNNI3KQ59H18 835 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 TEX2Q8IWB9 1127 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 FPGT-TNNI3KV9GXZ4 949 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
CALD1-202ENST00000361901 CHMP4CQ96CF2 233 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 ZNF652Q9Y2D9 606 aa10.88□□□□□ -0.67
CALD1-202ENST00000361901 A0A1B0GUL7 405 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 SASH1O94885 1247 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 CD2BP2O95400 341 aaKnown RBP10.87□□□□□ -0.67
CALD1-202ENST00000361901 ITGA6P23229 1130 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 HAND2P61296 217 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 LRRC2Q9BYS8 371 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 DLG5Q8TDM6 1919 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 IL15P40933 162 aaPredicted RBP10.87□□□□□ -0.67
CALD1-202ENST00000361901 HMGN5P82970 282 aaKnown RBP10.87□□□□□ -0.67
CALD1-202ENST00000361901 PDRG1Q9NUG6 133 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 CCDC87Q9NVE4 849 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 NCAPD2Q15021 1401 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 G3V3G9 751 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 TAF5LO75529 589 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 LRRFIP1Q32MZ4 808 aaKnown RBP10.87□□□□□ -0.67
CALD1-202ENST00000361901 RRP12Q5JTH9 1297 aaKnown RBP10.87□□□□□ -0.67
CALD1-202ENST00000361901 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 BLOC1S2Q6QNY1 142 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 MPNDQ8N594 471 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 PALD1Q9ULE6 856 aa10.87□□□□□ -0.67
CALD1-202ENST00000361901 KDM6AO15550 1401 aaPredicted RBP10.87□□□□□ -0.67
CALD1-202ENST00000361901 EYA2O00167 538 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 ATP2B3Q16720 1220 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 CCDC83Q8IWF9 413 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 ZGPATQ8N5A5 531 aaKnown RBP10.86□□□□□ -0.67
CALD1-202ENST00000361901 FAM184AQ8NB25 1140 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 AKAP2Q9Y2D5 859 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 DCCP43146 1447 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 CRKLP46109 303 aaKnown RBP10.86□□□□□ -0.67
CALD1-202ENST00000361901 RBM25P49756 843 aaKnown RBP10.86□□□□□ -0.67
CALD1-202ENST00000361901 TIGD1Q96MW7 591 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 ATP10DQ9P241 1426 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 RFC4P35249 363 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 TERF1P54274 439 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 NBPF5PQ86XG9 351 aaPredicted RBP10.86□□□□□ -0.67
CALD1-202ENST00000361901 AK7Q96M32 723 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 CCNL1Q9UK58 526 aaPredicted RBP10.86□□□□□ -0.67
CALD1-202ENST00000361901 RBM8AQ9Y5S9 174 aaKnown RBP10.86□□□□□ -0.67
CALD1-202ENST00000361901 PRPF40AO75400 957 aaKnown RBP10.86□□□□□ -0.67
CALD1-202ENST00000361901 NUCB2P80303 420 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 SMARCC1Q92922 1105 aaPredicted RBP10.86□□□□□ -0.67
CALD1-202ENST00000361901 UTP14AQ9BVJ6 771 aaKnown RBP10.86□□□□□ -0.67
CALD1-202ENST00000361901 CDCA7Q9BWT1 371 aaPredicted RBP10.86□□□□□ -0.67
CALD1-202ENST00000361901 LRP2BPQ9P2M1 347 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 KIF3AQ9Y496 699 aa10.86□□□□□ -0.67
CALD1-202ENST00000361901 TTC41PQ6P2S7 1318 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 H3BQV1 296 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 POLA2Q14181 598 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 IFFO2Q5TF58 517 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 CNPY4Q8N129 248 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 ZBTB9Q96C00 473 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 SEC62Q99442 399 aaKnown RBP10.85□□□□□ -0.67
CALD1-202ENST00000361901 JAG2Q9Y219 1238 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 FSD2A1L4K1 749 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 PSMA5P28066 241 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 PTPN12Q05209 780 aaKnown RBP10.85□□□□□ -0.67
CALD1-202ENST00000361901 RALYLQ86SE5 291 aaKnown RBP10.85□□□□□ -0.67
CALD1-202ENST00000361901 TNPO1Q92973 898 aaKnown RBP10.85□□□□□ -0.67
CALD1-202ENST00000361901 SNAP23O00161 211 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 TRDNQ13061 729 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 TMX3Q96JJ7 454 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 GREM2Q9H772 168 aa10.85□□□□□ -0.67
CALD1-202ENST00000361901 RGS12O14924 1447 aa10.84□□□□□ -0.67
CALD1-202ENST00000361901 RAB11FIP4Q86YS3 637 aa10.84□□□□□ -0.67
CALD1-202ENST00000361901 NECAB1Q8N987 351 aa10.84□□□□□ -0.67
CALD1-202ENST00000361901 CCDC39Q9UFE4 941 aa10.84□□□□□ -0.67
CALD1-202ENST00000361901 DBNLQ9UJU6 430 aaKnown RBP10.84□□□□□ -0.67
CALD1-202ENST00000361901 GNL2Q13823 731 aaKnown RBP10.84□□□□□ -0.67
CALD1-202ENST00000361901 SLFNL1Q499Z3 407 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms