RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 TIMM10P62072 90 aa15.91■□□□□ 0.14
SGMS1-202ENST00000361781 TFCP2Q12800 502 aa15.91■□□□□ 0.14
SGMS1-202ENST00000361781 KIF1BO60333 1816 aa15.91■□□□□ 0.14
SGMS1-202ENST00000361781 CABP4P57796 275 aa15.91■□□□□ 0.14
SGMS1-202ENST00000361781 ATP2B3Q16720 1220 aa15.91■□□□□ 0.14
SGMS1-202ENST00000361781 PTPN21Q16825 1174 aa15.91■□□□□ 0.14
SGMS1-202ENST00000361781 MICU3Q86XE3 530 aa15.91■□□□□ 0.14
SGMS1-202ENST00000361781 TLR7Q9NYK1 1049 aaKnown RBP15.91■□□□□ 0.14
SGMS1-202ENST00000361781 NCOA3Q9Y6Q9 1424 aa15.9■□□□□ 0.14
SGMS1-202ENST00000361781 TOP1P11387 765 aaKnown RBP15.9■□□□□ 0.14
SGMS1-202ENST00000361781 RPS6KB1P23443 525 aa15.9■□□□□ 0.14
SGMS1-202ENST00000361781 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
SGMS1-202ENST00000361781 SUCLG2Q96I99 432 aa15.9■□□□□ 0.14
SGMS1-202ENST00000361781 ZFYVE16Q7Z3T8 1539 aa15.9■□□□□ 0.14
SGMS1-202ENST00000361781 HOOK1Q9UJC3 728 aaKnown RBP15.9■□□□□ 0.14
SGMS1-202ENST00000361781 ZNF215Q9UL58 517 aaPredicted RBP15.9■□□□□ 0.14
SGMS1-202ENST00000361781 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
SGMS1-202ENST00000361781 KAT6BQ8WYB5 2073 aa15.9■□□□□ 0.14
SGMS1-202ENST00000361781 TATP17735 454 aaPredicted RBP15.9■□□□□ 0.14
SGMS1-202ENST00000361781 CCDC57Q2TAC2 916 aa15.9■□□□□ 0.14
SGMS1-202ENST00000361781 DBNDD2Q9BQY9 259 aa15.9■□□□□ 0.14
SGMS1-202ENST00000361781 CTAGE5O15320 804 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 MRVI1Q9Y6F6 885 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 PRR36Q9H6K5 1346 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 KLF18A0A0U1RQI7 1052 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 IMMTQ16891 758 aaKnown RBP15.89■□□□□ 0.13
SGMS1-202ENST00000361781 TSR1Q2NL82 804 aaKnown RBP15.89■□□□□ 0.13
SGMS1-202ENST00000361781 ARHGAP29Q52LW3 1261 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 CACTINQ8WUQ7 758 aaKnown RBP15.89■□□□□ 0.13
SGMS1-202ENST00000361781 ZSCAN16Q9H4T2 348 aaPredicted RBP15.89■□□□□ 0.13
SGMS1-202ENST00000361781 STAP2Q9UGK3 403 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 MAP3K5Q99683 1374 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 PRAMEF22A3QJZ6 481 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 SLU7O95391 586 aaKnown RBP15.89■□□□□ 0.13
SGMS1-202ENST00000361781 METP08581 1390 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 GNG11P61952 73 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 PROSER3Q2NL68 480 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 HSP90B2PQ58FF3 399 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 ANKRD13DQ6ZTN6 518 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 LINS1Q8NG48 757 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 LRRC7Q96NW7 1537 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 CLSTN2Q9H4D0 955 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 CNNM1Q9NRU3 951 aa15.89■□□□□ 0.13
SGMS1-202ENST00000361781 RNF216Q9NWF9 866 aaPredicted RBP15.89■□□□□ 0.13
SGMS1-202ENST00000361781 JMYQ8N9B5 988 aa15.88■□□□□ 0.13
SGMS1-202ENST00000361781 MRPS27Q92552 414 aaKnown RBP15.88■□□□□ 0.13
SGMS1-202ENST00000361781 NOL10Q9BSC4 688 aaKnown RBP15.88■□□□□ 0.13
SGMS1-202ENST00000361781 HMG20BQ9P0W2 317 aa15.88■□□□□ 0.13
SGMS1-202ENST00000361781 SPHKAPQ2M3C7 1700 aa15.88■□□□□ 0.13
SGMS1-202ENST00000361781 KIF24Q5T7B8 1368 aa15.88■□□□□ 0.13
SGMS1-202ENST00000361781 GTPBP4Q9BZE4 634 aaKnown RBP15.88■□□□□ 0.13
SGMS1-202ENST00000361781 ERICH2A1L162 156 aa15.87■□□□□ 0.13
SGMS1-202ENST00000361781 MCMDC2Q4G0Z9 681 aa15.87■□□□□ 0.13
SGMS1-202ENST00000361781 BBXQ8WY36 941 aaPredicted RBP15.87■□□□□ 0.13
SGMS1-202ENST00000361781 PDIA4P13667 645 aaKnown RBP15.87■□□□□ 0.13
SGMS1-202ENST00000361781 UBASH3AP57075 661 aa15.87■□□□□ 0.13
SGMS1-202ENST00000361781 OGFRQ9NZT2 677 aa15.87■□□□□ 0.13
SGMS1-202ENST00000361781 YEATS2Q9ULM3 1422 aa15.87■□□□□ 0.13
SGMS1-202ENST00000361781 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
SGMS1-202ENST00000361781 NFATC2IPQ8NCF5 419 aa15.86■□□□□ 0.13
SGMS1-202ENST00000361781 PI4K2BQ8TCG2 481 aa15.86■□□□□ 0.13
SGMS1-202ENST00000361781 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
SGMS1-202ENST00000361781 ZSWIM6Q9HCJ5 1215 aa15.86■□□□□ 0.13
SGMS1-202ENST00000361781 ZNF589Q86UQ0 364 aaPredicted RBP15.86■□□□□ 0.13
SGMS1-202ENST00000361781 CNNM3Q8NE01 707 aa15.86■□□□□ 0.13
SGMS1-202ENST00000361781 NEMFO60524 1076 aa15.86■□□□□ 0.13
SGMS1-202ENST00000361781 PDE4CQ08493 712 aa15.86■□□□□ 0.13
SGMS1-202ENST00000361781 THEMISQ8N1K5 641 aaPredicted RBP15.86■□□□□ 0.13
SGMS1-202ENST00000361781 LAMC1P11047 1609 aa15.86■□□□□ 0.13
SGMS1-202ENST00000361781 GSDMDP57764 484 aa15.85■□□□□ 0.13
SGMS1-202ENST00000361781 PPFIBP1Q86W92 1011 aa15.85■□□□□ 0.13
SGMS1-202ENST00000361781 FAM193AP78312 1265 aa15.85■□□□□ 0.13
SGMS1-202ENST00000361781 ANKRD24Q8TF21 1146 aa15.85■□□□□ 0.13
SGMS1-202ENST00000361781 CCDC102AQ96A19 550 aa15.85■□□□□ 0.13
SGMS1-202ENST00000361781 TULP4Q9NRJ4 1543 aa15.85■□□□□ 0.13
SGMS1-202ENST00000361781 EIF4A1P60842 406 aaKnown RBP15.85■□□□□ 0.13
SGMS1-202ENST00000361781 CHRNA2Q15822 529 aa15.85■□□□□ 0.13
SGMS1-202ENST00000361781 ERCC6LQ2NKX8 1250 aa15.85■□□□□ 0.13
SGMS1-202ENST00000361781 USP28Q96RU2 1077 aa15.85■□□□□ 0.13
SGMS1-202ENST00000361781 UTP14AQ9BVJ6 771 aaKnown RBP15.85■□□□□ 0.13
SGMS1-202ENST00000361781 VGLL3A8MV65 326 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 ZNF213O14771 459 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 SLFNL1Q499Z3 407 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 BEND3Q5T5X7 828 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 STRN4Q9NRL3 753 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 TET3O43151 1660 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 ALDH1L1O75891 902 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 SYKP43405 635 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 ZNF397Q8NF99 534 aaPredicted RBP15.84■□□□□ 0.13
SGMS1-202ENST00000361781 PNPLA6Q8IY17 1366 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 GTF2E1P29083 439 aaPredicted RBP15.84■□□□□ 0.13
SGMS1-202ENST00000361781 EVA1CP58658 441 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 BMS1Q14692 1282 aaKnown RBP15.84■□□□□ 0.13
SGMS1-202ENST00000361781 KARSQ15046 597 aaKnown RBP15.84■□□□□ 0.13
SGMS1-202ENST00000361781 CTNNA3Q9UI47 895 aa15.84■□□□□ 0.13
SGMS1-202ENST00000361781 KIF2AO00139 706 aaPredicted RBP15.83■□□□□ 0.13
SGMS1-202ENST00000361781 SPECC1Q5M775 1068 aa15.83■□□□□ 0.13
SGMS1-202ENST00000361781 IQGAP1P46940 1657 aa15.83■□□□□ 0.12
SGMS1-202ENST00000361781 SPTLC2O15270 562 aa15.83■□□□□ 0.12
SGMS1-202ENST00000361781 IPO7O95373 1038 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms