RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 ZIC5Q96T25 663 aa8.15□□□□□ -1.11
CDC42SE2-201ENST00000360515 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.11
CDC42SE2-201ENST00000360515 RTL9Q8NET4 1388 aa8.15□□□□□ -1.11
CDC42SE2-201ENST00000360515 INHBEP58166 350 aa8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 PNISRQ8TF01 805 aaKnown RBP8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 ALDH1A1P00352 501 aa8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 A1BGP04217 495 aa8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 AGBL3Q8NEM8 1001 aa8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 GLIS2Q9BZE0 524 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 ABCC4O15439 1325 aa8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 LDLRAD1Q5T700 205 aa8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 GIGYF2Q6Y7W6 1299 aaKnown RBP8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 BICDL1Q6ZP65 573 aa8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 C2orf69Q8N8R5 385 aa8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 TRPM4Q8TD43 1214 aa8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 ZCCHC17Q9NP64 241 aaKnown RBP8.14□□□□□ -1.11
CDC42SE2-201ENST00000360515 SF3B3Q15393 1217 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-201ENST00000360515 PCNTO95613 3336 aa8.12□□□□□ -1.11
CDC42SE2-201ENST00000360515 LARGE2Q8N3Y3 721 aa8.12□□□□□ -1.11
CDC42SE2-201ENST00000360515 USP16Q9Y5T5 823 aa8.12□□□□□ -1.11
CDC42SE2-201ENST00000360515 NIP7Q9Y221 180 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDC42SE2-201ENST00000360515 DIAPH1O60610 1272 aaKnown RBP8.12□□□□□ -1.11
CDC42SE2-201ENST00000360515 NEUROD1Q13562 356 aa8.12□□□□□ -1.11
CDC42SE2-201ENST00000360515 PANK3Q9H999 370 aa8.12□□□□□ -1.11
CDC42SE2-201ENST00000360515 HUNKP57058 714 aa8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 GRAPQ13588 217 aa8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 HLFQ16534 295 aa8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 MORC1Q86VD1 984 aa8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 MTMR14Q8NCE2 650 aa8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 GRAPLQ8TC17 118 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 CNOT7Q9UIV1 285 aaKnown RBP8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 GPR25O00155 361 aa8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 TRIM28Q13263 835 aaKnown RBP8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 OLFM4Q6UX06 510 aa8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 SOX10P56693 466 aa8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 SREBF2Q12772 1141 aa8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 ZNF296Q8WUU4 475 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE2-201ENST00000360515 CACNA1FO60840 1977 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 MAST2Q6P0Q8 1798 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 ZBTB48P10074 688 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 PPP2R3BQ9Y5P8 575 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 H7C1D1 291 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 ZBTB22O15209 634 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 FKTNO75072 461 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 GNRH1P01148 92 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 PDIA6Q15084 440 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 PPP1R42Q7Z4L9 355 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 CDCA5Q96FF9 252 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 SPEF2Q9C093 1822 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 BTBD11A6QL63 1104 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 PPIP5K2O43314 1243 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 SUSD4Q5VX71 490 aa8.1□□□□□ -1.11
CDC42SE2-201ENST00000360515 PRMT2P55345 433 aa8.09□□□□□ -1.11
CDC42SE2-201ENST00000360515 TEFQ10587 303 aa8.09□□□□□ -1.11
CDC42SE2-201ENST00000360515 AOC3Q16853 763 aa8.09□□□□□ -1.11
CDC42SE2-201ENST00000360515 PTPN22Q9Y2R2 807 aa8.09□□□□□ -1.11
CDC42SE2-201ENST00000360515 FKBP1AP62942 108 aaKnown RBP8.09□□□□□ -1.11
CDC42SE2-201ENST00000360515 RPGRQ92834 1020 aaKnown RBP8.09□□□□□ -1.11
CDC42SE2-201ENST00000360515 ZNF333Q96JL9 665 aa8.09□□□□□ -1.11
CDC42SE2-201ENST00000360515 PDE4DIPQ5VU43 2346 aa8.09□□□□□ -1.11
CDC42SE2-201ENST00000360515 PPM1GO15355 546 aaPredicted RBP8.09□□□□□ -1.12
CDC42SE2-201ENST00000360515 BMP8BP34820 402 aa8.09□□□□□ -1.12
CDC42SE2-201ENST00000360515 HSP90AB3PQ58FF7 597 aa8.09□□□□□ -1.12
CDC42SE2-201ENST00000360515 USP48Q86UV5 1035 aa8.09□□□□□ -1.12
CDC42SE2-201ENST00000360515 FRMPD3Q5JV73 1810 aa8.08□□□□□ -1.12
CDC42SE2-201ENST00000360515 C3orf67Q6ZVT6 689 aa8.08□□□□□ -1.12
CDC42SE2-201ENST00000360515 MICALL2Q8IY33 904 aa8.08□□□□□ -1.12
CDC42SE2-201ENST00000360515 TSKSQ9UJT2 592 aa8.08□□□□□ -1.12
CDC42SE2-201ENST00000360515 MYO3BQ8WXR4 1341 aa8.08□□□□□ -1.12
CDC42SE2-201ENST00000360515 EIF4A1P60842 406 aaKnown RBP8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 MPNDQ8N594 471 aa8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 MED23Q9ULK4 1368 aa8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 ZNF157P51786 506 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 TAF7Q15545 349 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 GJA3Q9Y6H8 435 aa8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 PHIPQ8WWQ0 1821 aa8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 IRS2Q9Y4H2 1338 aa8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 MANSC4A6NHS7 340 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 KCNQ3O43525 872 aa8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 C15orf52Q6ZUT6 534 aaKnown RBP8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 LOC285556D6RIA3 1793 aa8.07□□□□□ -1.12
CDC42SE2-201ENST00000360515 HOXB7P09629 217 aa8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 KRT26Q7Z3Y9 468 aa8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 DCPSQ96C86 337 aaKnown RBP8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 ERO1AQ96HE7 468 aa8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 NLRP3Q96P20 1036 aa8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 LTBP2Q14767 1821 aa8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 PSMD14O00487 310 aa8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 ISCA1Q9BUE6 129 aa8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 KIF4BQ2VIQ3 1234 aa8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 DPP8Q6V1X1 898 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 OTOP1Q7RTM1 612 aa8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 EYA3Q99504 573 aa8.06□□□□□ -1.12
CDC42SE2-201ENST00000360515 RSBN1LQ6PCB5 846 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE2-201ENST00000360515 UTP14AQ9BVJ6 771 aaKnown RBP8.05□□□□□ -1.12
CDC42SE2-201ENST00000360515 PRAMEF22A3QJZ6 481 aa8.05□□□□□ -1.12
CDC42SE2-201ENST00000360515 SPRYD7Q5W111 196 aa8.05□□□□□ -1.12
CDC42SE2-201ENST00000360515 PLEKHF1Q96S99 279 aa8.05□□□□□ -1.12
CDC42SE2-201ENST00000360515 TRPA1O75762 1119 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms