RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PDCP20941 246 aa10.23□□□□□ -0.77
RFX3-202ENST00000358730 KRT85P78386 507 aa10.23□□□□□ -0.77
RFX3-202ENST00000358730 LRP10Q7Z4F1 713 aa10.23□□□□□ -0.77
RFX3-202ENST00000358730 FMNL2Q96PY5 1086 aa10.23□□□□□ -0.77
RFX3-202ENST00000358730 NDUFB9Q9Y6M9 179 aa10.23□□□□□ -0.77
RFX3-202ENST00000358730 ATP5J2-PTCD1G3V325 749 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 PTCD1O75127 700 aaKnown RBP10.22□□□□□ -0.77
RFX3-202ENST00000358730 ADCY5O95622 1261 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 ATP5JP18859 108 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 PTPN12Q05209 780 aaKnown RBP10.22□□□□□ -0.77
RFX3-202ENST00000358730 KIAA2012Q0VF49 1180 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 STK3Q13188 491 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 TOB2Q14106 344 aaPredicted RBP10.22□□□□□ -0.77
RFX3-202ENST00000358730 MPNDQ8N594 471 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 DCAF5Q96JK2 942 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 DNAJC2Q99543 621 aaKnown RBP10.22□□□□□ -0.77
RFX3-202ENST00000358730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.22□□□□□ -0.774e-6■□□□□ 11.2
RFX3-202ENST00000358730 LAMB4A4D0S4 1761 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 COL18A1P39060 1754 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 TAF5LO75529 589 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 RFX5P48382 616 aaPredicted RBP10.22□□□□□ -0.77
RFX3-202ENST00000358730 TERF1P54274 439 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 ABCC6O95255 1503 aa10.22□□□□□ -0.77
RFX3-202ENST00000358730 COL15A1P39059 1388 aa10.21□□□□□ -0.77
RFX3-202ENST00000358730 A0A087WZG4 1122 aa10.21□□□□□ -0.77
RFX3-202ENST00000358730 CYP27B1O15528 508 aa10.21□□□□□ -0.77
RFX3-202ENST00000358730 CHRNA2Q15822 529 aa10.21□□□□□ -0.77
RFX3-202ENST00000358730 FAM173BQ6P4H8 233 aa10.21□□□□□ -0.77
RFX3-202ENST00000358730 TTC6Q86TZ1 520 aa10.21□□□□□ -0.77
RFX3-202ENST00000358730 CABLES1Q8TDN4 633 aa10.21□□□□□ -0.77
RFX3-202ENST00000358730 PKD1L3Q7Z443 1732 aa10.21□□□□□ -0.77
RFX3-202ENST00000358730 PDIA4P13667 645 aaKnown RBP10.21□□□□□ -0.78
RFX3-202ENST00000358730 ATF3P18847 181 aa10.21□□□□□ -0.78
RFX3-202ENST00000358730 PLCB2Q00722 1185 aa10.21□□□□□ -0.78
RFX3-202ENST00000358730 RABL6Q3YEC7 729 aaPredicted RBP10.21□□□□□ -0.78
RFX3-202ENST00000358730 FUCA2Q9BTY2 467 aa10.21□□□□□ -0.78
RFX3-202ENST00000358730 CHMP3Q9Y3E7 222 aa10.21□□□□□ -0.78
RFX3-202ENST00000358730 ZNF609O15014 1411 aa10.21□□□□□ -0.78
RFX3-202ENST00000358730 RFX7Q2KHR2 1363 aa10.21□□□□□ -0.78
RFX3-202ENST00000358730 KRT32Q14532 448 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 CCDC129Q6ZRS4 1044 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 DBNDD2Q9BQY9 259 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 CHGBP05060 677 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 CABP4P57796 275 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 ALDH8A1Q9H2A2 487 aaPredicted RBP10.2□□□□□ -0.78
RFX3-202ENST00000358730 CCDC9Q9Y3X0 531 aaKnown RBP10.2□□□□□ -0.78
RFX3-202ENST00000358730 GLI3P10071 1580 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 UQCRHLA0A096LP55 91 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 KDM4AO75164 1064 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 UQCRHP07919 91 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 TSGA10IPQ3SY00 556 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 USPL1Q5W0Q7 1092 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 DDX46Q7L014 1031 aaKnown RBP10.2□□□□□ -0.78
RFX3-202ENST00000358730 UBE2Q2Q8WVN8 375 aa10.2□□□□□ -0.78
RFX3-202ENST00000358730 ZNF830Q96NB3 372 aaPredicted RBP10.2□□□□□ -0.78
RFX3-202ENST00000358730 SEC62Q99442 399 aaKnown RBP10.2□□□□□ -0.78
RFX3-202ENST00000358730 ELP1O95163 1332 aa10.19□□□□□ -0.78
RFX3-202ENST00000358730 CCDC192P0DO97 292 aa10.19□□□□□ -0.78
RFX3-202ENST00000358730 HSP90B1P14625 803 aaKnown RBP10.19□□□□□ -0.78
RFX3-202ENST00000358730 NEK1Q96PY6 1258 aa10.19□□□□□ -0.78
RFX3-202ENST00000358730 U3KPZ7 1027 aaPredicted RBP10.19□□□□□ -0.78
RFX3-202ENST00000358730 LMBR1LQ6UX01 489 aa10.19□□□□□ -0.78
RFX3-202ENST00000358730 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
RFX3-202ENST00000358730 PLBD2Q8NHP8 589 aa10.19□□□□□ -0.78
RFX3-202ENST00000358730 GTF3C6Q969F1 213 aa10.19□□□□□ -0.78
RFX3-202ENST00000358730 HAUS7Q99871 368 aa10.19□□□□□ -0.78
RFX3-202ENST00000358730 NUP62CLQ9H1M0 184 aa10.19□□□□□ -0.78
RFX3-202ENST00000358730 PARP4Q9UKK3 1724 aaKnown RBP10.18□□□□□ -0.78
RFX3-202ENST00000358730 GOLGA6L4A6NEF3 574 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 JAK2O60674 1132 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 LIG1P18858 919 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 SPATA32Q96LK8 384 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 TTC12Q9H892 705 aaPredicted RBP10.18□□□□□ -0.78
RFX3-202ENST00000358730 TNS3Q68CZ2 1445 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 CAMK4Q16566 473 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 MAP3K11Q16584 847 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 MCMDC2Q4G0Z9 681 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 Q6ZUG5 572 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 SCAND2PQ9GZW5 306 aaPredicted RBP10.18□□□□□ -0.78
RFX3-202ENST00000358730 TMEM94Q12767 1356 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 PLEKHG2Q9H7P9 1386 aa10.18□□□□□ -0.78
RFX3-202ENST00000358730 CYP21A2P08686 494 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 CASP7P55210 303 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 FGD1P98174 961 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 DNTTIP2Q5QJE6 756 aaKnown RBP10.17□□□□□ -0.78
RFX3-202ENST00000358730 SASS6Q6UVJ0 657 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 TFIP11Q9UBB9 837 aaKnown RBP10.17□□□□□ -0.78
RFX3-202ENST00000358730 LAMA4Q16363 1823 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 KBTBD3Q8NAB2 608 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 PIBF1Q8WXW3 757 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 RBM10P98175 930 aaKnown RBP10.17□□□□□ -0.78
RFX3-202ENST00000358730 LEO1Q8WVC0 666 aaPredicted RBP10.17□□□□□ -0.78
RFX3-202ENST00000358730 BRF1Q92994 677 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 NEUROD6Q96NK8 337 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 LRRC2Q9BYS8 371 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 TNMDQ9H2S6 317 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 DACT1Q9NYF0 836 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 SH3TC1Q8TE82 1336 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 TJP1Q07157 1748 aa10.17□□□□□ -0.78
RFX3-202ENST00000358730 NUP188Q5SRE5 1749 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms