RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 GZF1Q9H116 711 aaPredicted RBP17.34■□□□□ 0.37
NIPAL3-203ENST00000358028 GRM8O00222 908 aa17.33■□□□□ 0.37
NIPAL3-203ENST00000358028 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.37
NIPAL3-203ENST00000358028 SCN7AQ01118 1682 aa17.33■□□□□ 0.37
NIPAL3-203ENST00000358028 BCORQ6W2J9 1755 aa17.33■□□□□ 0.36
NIPAL3-203ENST00000358028 MCM2P49736 904 aa17.33■□□□□ 0.36
NIPAL3-203ENST00000358028 ANAPC15P60006 121 aa17.33■□□□□ 0.36
NIPAL3-203ENST00000358028 ARHGEF1Q92888 912 aaKnown RBP17.33■□□□□ 0.36
NIPAL3-203ENST00000358028 ANO2Q9NQ90 1003 aa17.33■□□□□ 0.36
NIPAL3-203ENST00000358028 TTC41PQ6P2S7 1318 aa17.32■□□□□ 0.36
NIPAL3-203ENST00000358028 A1BGP04217 495 aa17.32■□□□□ 0.36
NIPAL3-203ENST00000358028 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
NIPAL3-203ENST00000358028 MSL1Q68DK7 614 aa17.32■□□□□ 0.36
NIPAL3-203ENST00000358028 RIC3Q7Z5B4 369 aa17.32■□□□□ 0.36
NIPAL3-203ENST00000358028 ERC1Q8IUD2 1116 aa17.32■□□□□ 0.36
NIPAL3-203ENST00000358028 IL17RAQ96F46 866 aa17.32■□□□□ 0.36
NIPAL3-203ENST00000358028 SUCLG2Q96I99 432 aa17.32■□□□□ 0.36
NIPAL3-203ENST00000358028 FHDC1Q9C0D6 1143 aaPredicted RBP17.32■□□□□ 0.36
NIPAL3-203ENST00000358028 COL15A1P39059 1388 aa17.32■□□□□ 0.36
NIPAL3-203ENST00000358028 CYP2E1P05181 493 aaPredicted RBP17.31■□□□□ 0.36
NIPAL3-203ENST00000358028 ADRA2BP18089 450 aa17.31■□□□□ 0.36
NIPAL3-203ENST00000358028 TRAPPC3LQ5T215 181 aa17.31■□□□□ 0.36
NIPAL3-203ENST00000358028 CNTROBQ8N137 903 aa17.31■□□□□ 0.36
NIPAL3-203ENST00000358028 ARXQ96QS3 562 aa17.31■□□□□ 0.36
NIPAL3-203ENST00000358028 MAP4K4O95819 1239 aaPredicted RBP17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 IGKV5-2P06315 115 aa17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 MYL6BP14649 208 aa17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 XAGE3Q8WTP9 111 aa17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 BAG4O95429 457 aaKnown RBP17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 NEXNQ0ZGT2 675 aa17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 CLASRPQ8N2M8 674 aaKnown RBP17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 KAZALD1Q96I82 304 aa17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 SYT17Q9BSW7 474 aa17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 PALD1Q9ULE6 856 aa17.3■□□□□ 0.36
NIPAL3-203ENST00000358028 GOLGB1Q14789 3259 aaKnown RBP17.29■□□□□ 0.36
NIPAL3-203ENST00000358028 GLRX3O76003 335 aaKnown RBP17.29■□□□□ 0.36
NIPAL3-203ENST00000358028 NEK4P51957 841 aa17.29■□□□□ 0.36
NIPAL3-203ENST00000358028 BICC1Q9H694 974 aaKnown RBP17.29■□□□□ 0.36
NIPAL3-203ENST00000358028 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
NIPAL3-203ENST00000358028 PA2G4Q9UQ80 394 aaKnown RBP17.29■□□□□ 0.36
NIPAL3-203ENST00000358028 AFDNP55196 1824 aaKnown RBP17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 NEURL1BA8MQ27 555 aa17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 RFC4P35249 363 aa17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 EIF5P55010 431 aaKnown RBP17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 KLHL40Q2TBA0 621 aa17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 COPS6Q7L5N1 327 aa17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 METTL22Q9BUU2 404 aaPredicted RBP17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 IL25Q9H293 177 aa17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 ZNF330Q9Y3S2 320 aaPredicted RBP17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 ARFGEF2Q9Y6D5 1785 aa17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 NBPF26B4DH59 902 aa17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 NBPF10Q6P3W6 841 aaKnown RBP17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 LRP10Q7Z4F1 713 aa17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 NBPF15Q8N660 670 aa17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 MYD88Q99836 296 aa17.28■□□□□ 0.36
NIPAL3-203ENST00000358028 SGSM2O43147 1006 aa17.27■□□□□ 0.35
NIPAL3-203ENST00000358028 GCKRQ14397 625 aa17.27■□□□□ 0.35
NIPAL3-203ENST00000358028 GPATCH3Q96I76 525 aa17.27■□□□□ 0.35
NIPAL3-203ENST00000358028 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.35
NIPAL3-203ENST00000358028 IFIT2P09913 472 aaKnown RBP17.26■□□□□ 0.35
NIPAL3-203ENST00000358028 GYS1P13807 737 aa17.26■□□□□ 0.35
NIPAL3-203ENST00000358028 IL6STP40189 918 aaPredicted RBP17.26■□□□□ 0.35
NIPAL3-203ENST00000358028 HSPA4P34932 840 aa17.25■□□□□ 0.35
NIPAL3-203ENST00000358028 G3BP1Q13283 466 aaKnown RBP eCLIP17.25■□□□□ 0.35
NIPAL3-203ENST00000358028 ANKRD13DQ6ZTN6 518 aa17.25■□□□□ 0.35
NIPAL3-203ENST00000358028 ZGPATQ8N5A5 531 aaKnown RBP17.25■□□□□ 0.35
NIPAL3-203ENST00000358028 RAD50Q92878 1312 aa17.25■□□□□ 0.35
NIPAL3-203ENST00000358028 NUP98P52948 1817 aa17.25■□□□□ 0.35
NIPAL3-203ENST00000358028 POLD1P28340 1107 aa17.25■□□□□ 0.35
NIPAL3-203ENST00000358028 USPL1Q5W0Q7 1092 aa17.25■□□□□ 0.35
NIPAL3-203ENST00000358028 AACSQ86V21 672 aa17.25■□□□□ 0.35
NIPAL3-203ENST00000358028 TMX3Q96JJ7 454 aa17.25■□□□□ 0.35
NIPAL3-203ENST00000358028 SASH1O94885 1247 aa17.24■□□□□ 0.35
NIPAL3-203ENST00000358028 LSG1Q9H089 658 aaKnown RBP17.24■□□□□ 0.35
NIPAL3-203ENST00000358028 NARFQ9UHQ1 456 aa17.23■□□□□ 0.35
NIPAL3-203ENST00000358028 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
NIPAL3-203ENST00000358028 ZPR1O75312 459 aa17.23■□□□□ 0.35
NIPAL3-203ENST00000358028 CUL4AQ13619 759 aa17.23■□□□□ 0.35
NIPAL3-203ENST00000358028 INTS4Q96HW7 963 aaKnown RBP17.23■□□□□ 0.35
NIPAL3-203ENST00000358028 DDX49Q9Y6V7 483 aaKnown RBP17.23■□□□□ 0.35
NIPAL3-203ENST00000358028 DCAF8L1A6NGE4 600 aa17.22■□□□□ 0.35
NIPAL3-203ENST00000358028 ERBB4Q15303 1308 aa17.22■□□□□ 0.35
NIPAL3-203ENST00000358028 RUFY2Q8WXA3 655 aa17.22■□□□□ 0.35
NIPAL3-203ENST00000358028 PANK2Q9BZ23 570 aa17.22■□□□□ 0.35
NIPAL3-203ENST00000358028 BCL2L12Q9HB09 334 aa17.22■□□□□ 0.35
NIPAL3-203ENST00000358028 DIAPH3Q9NSV4 1193 aa17.22■□□□□ 0.35
NIPAL3-203ENST00000358028 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
NIPAL3-203ENST00000358028 A0A087WZG4 1122 aa17.21■□□□□ 0.35
NIPAL3-203ENST00000358028 PKP1Q13835 747 aa17.21■□□□□ 0.35
NIPAL3-203ENST00000358028 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
NIPAL3-203ENST00000358028 CWC27Q6UX04 472 aaKnown RBP17.21■□□□□ 0.35
NIPAL3-203ENST00000358028 KIAA1211Q6ZU35 1233 aa17.21■□□□□ 0.35
NIPAL3-203ENST00000358028 DZIP3Q86Y13 1208 aaKnown RBP17.21■□□□□ 0.35
NIPAL3-203ENST00000358028 EAF2Q96CJ1 260 aaPredicted RBP17.21■□□□□ 0.35
NIPAL3-203ENST00000358028 EVI5LQ96CN4 794 aa17.21■□□□□ 0.35
NIPAL3-203ENST00000358028 MMP10P09238 476 aa17.2■□□□□ 0.34
NIPAL3-203ENST00000358028 PLBD2Q8NHP8 589 aa17.2■□□□□ 0.34
NIPAL3-203ENST00000358028 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.2■□□□□ 0.34
NIPAL3-203ENST00000358028 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms