RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 RNF20Q5VTR2 975 aa24.33■■□□□ 1.49
COL13A1-202ENST00000357811 TSC1Q92574 1164 aa24.33■■□□□ 1.49
COL13A1-202ENST00000357811 NEUROD6Q96NK8 337 aa24.33■■□□□ 1.49
COL13A1-202ENST00000357811 KIAA2012Q0VF49 1180 aa24.33■■□□□ 1.49
COL13A1-202ENST00000357811 NAP1L2Q9ULW6 460 aaPredicted RBP24.33■■□□□ 1.49
COL13A1-202ENST00000357811 RPS6KB1P23443 525 aa24.33■■□□□ 1.48
COL13A1-202ENST00000357811 TAF5LO75529 589 aa24.32■■□□□ 1.48
COL13A1-202ENST00000357811 PTPN12Q05209 780 aaKnown RBP24.32■■□□□ 1.48
COL13A1-202ENST00000357811 HIP1O00291 1037 aa24.32■■□□□ 1.48
COL13A1-202ENST00000357811 FGD1P98174 961 aa24.32■■□□□ 1.48
COL13A1-202ENST00000357811 TNNI3KQ59H18 835 aa24.32■■□□□ 1.48
COL13A1-202ENST00000357811 FPGT-TNNI3KV9GXZ4 949 aa24.32■■□□□ 1.48
COL13A1-202ENST00000357811 COL15A1P39059 1388 aa24.31■■□□□ 1.48
COL13A1-202ENST00000357811 KCNB2Q92953 911 aa24.31■■□□□ 1.48
COL13A1-202ENST00000357811 KRT85P78386 507 aa24.31■■□□□ 1.48
COL13A1-202ENST00000357811 FAM184AQ8NB25 1140 aa24.31■■□□□ 1.48
COL13A1-202ENST00000357811 LMO7Q8WWI1 1683 aa24.31■■□□□ 1.48
COL13A1-202ENST00000357811 UTYO14607 1347 aa24.31■■□□□ 1.48
COL13A1-202ENST00000357811 GOLGA6L4A6NEF3 574 aa24.3■■□□□ 1.48
COL13A1-202ENST00000357811 KDM6AO15550 1401 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-202ENST00000357811 FAM177BA6PVY3 158 aa24.3■■□□□ 1.48
COL13A1-202ENST00000357811 CYP27B1O15528 508 aa24.3■■□□□ 1.48
COL13A1-202ENST00000357811 LMBR1LQ6UX01 489 aa24.3■■□□□ 1.48
COL13A1-202ENST00000357811 ZNF330Q9Y3S2 320 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-202ENST00000357811 CHD2O14647 1828 aaKnown RBP24.3■■□□□ 1.48
COL13A1-202ENST00000357811 KDM4AO75164 1064 aa24.3■■□□□ 1.48
COL13A1-202ENST00000357811 DACT1Q9NYF0 836 aa24.29■■□□□ 1.48
COL13A1-202ENST00000357811 NPHP4O75161 1426 aaPredicted RBP24.29■■□□□ 1.48
COL13A1-202ENST00000357811 NCAPD2Q15021 1401 aa24.29■■□□□ 1.48
COL13A1-202ENST00000357811 A0A0G2JLW4 131 aa24.29■■□□□ 1.48
COL13A1-202ENST00000357811 TIMM10P62072 90 aa24.29■■□□□ 1.48
COL13A1-202ENST00000357811 SNRPA1P09661 255 aaKnown RBP24.28■■□□□ 1.48
COL13A1-202ENST00000357811 Q6ZUG5 572 aa24.28■■□□□ 1.48
COL13A1-202ENST00000357811 CSPP1Q1MSJ5 1256 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 CHST3Q7LGC8 479 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 LUZP1Q86V48 1076 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 IFNL2Q8IZJ0 200 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 SPATA32Q96LK8 384 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 FUCA2Q9BTY2 467 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 TAOK2Q9UL54 1235 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 MCM5P33992 734 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 CCDC85AQ96PX6 553 aaPredicted RBP24.27■■□□□ 1.48
COL13A1-202ENST00000357811 LETM1O95202 739 aaPredicted RBP24.27■■□□□ 1.48
COL13A1-202ENST00000357811 CABP4P57796 275 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 BRF1Q92994 677 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 MED23Q9ULK4 1368 aa24.27■■□□□ 1.48
COL13A1-202ENST00000357811 RGPD5Q99666 1765 aa24.26■■□□□ 1.47
COL13A1-202ENST00000357811 GOLIM4O00461 696 aa24.26■■□□□ 1.47
COL13A1-202ENST00000357811 RFX5P48382 616 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-202ENST00000357811 ZNF594Q96JF6 807 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-202ENST00000357811 NEK1Q96PY6 1258 aa24.26■■□□□ 1.47
COL13A1-202ENST00000357811 USP54Q70EL1 1684 aa24.26■■□□□ 1.47
COL13A1-202ENST00000357811 CYP21A2P08686 494 aa24.26■■□□□ 1.47
COL13A1-202ENST00000357811 UVSSAQ2YD98 709 aa24.26■■□□□ 1.47
COL13A1-202ENST00000357811 NUP62CLQ9H1M0 184 aa24.25■■□□□ 1.47
COL13A1-202ENST00000357811 BICD2Q8TD16 824 aa24.24■■□□□ 1.47
COL13A1-202ENST00000357811 FTOQ9C0B1 505 aaKnown RBP eCLIP24.24■■□□□ 1.47
COL13A1-202ENST00000357811 ZBTB3Q9H5J0 574 aa24.24■■□□□ 1.47
COL13A1-202ENST00000357811 COPRSQ9NQ92 184 aa24.24■■□□□ 1.47
COL13A1-202ENST00000357811 MEGF6O75095 1541 aa24.24■■□□□ 1.47
COL13A1-202ENST00000357811 CCDC192P0DO97 292 aa24.24■■□□□ 1.47
COL13A1-202ENST00000357811 CCT2P78371 535 aaKnown RBP24.24■■□□□ 1.47
COL13A1-202ENST00000357811 NOLC1Q14978 699 aaKnown RBP eCLIP24.24■■□□□ 1.47
COL13A1-202ENST00000357811 TTLL7Q6ZT98 887 aa24.24■■□□□ 1.47
COL13A1-202ENST00000357811 ATP5JP18859 108 aa24.24■■□□□ 1.47
COL13A1-202ENST00000357811 LRP10Q7Z4F1 713 aa24.24■■□□□ 1.47
COL13A1-202ENST00000357811 FMNL2Q96PY5 1086 aa24.24■■□□□ 1.47
COL13A1-202ENST00000357811 CRYBG1Q9Y4K1 1723 aa24.23■■□□□ 1.47
COL13A1-202ENST00000357811 H3BQV1 296 aa24.23■■□□□ 1.47
COL13A1-202ENST00000357811 ANKRD1Q15327 319 aa24.23■■□□□ 1.47
COL13A1-202ENST00000357811 IFFO2Q5TF58 517 aa24.23■■□□□ 1.47
COL13A1-202ENST00000357811 TNMDQ9H2S6 317 aa24.23■■□□□ 1.47
COL13A1-202ENST00000357811 PDCP20941 246 aa24.23■■□□□ 1.47
COL13A1-202ENST00000357811 GUCY1B3Q02153 619 aa24.23■■□□□ 1.47
COL13A1-202ENST00000357811 MAP3K11Q16584 847 aa24.23■■□□□ 1.47
COL13A1-202ENST00000357811 ZNF609O15014 1411 aa24.23■■□□□ 1.47
COL13A1-202ENST00000357811 NR1I2O75469 434 aa24.22■■□□□ 1.47
COL13A1-202ENST00000357811 A1BGP04217 495 aa24.22■■□□□ 1.47
COL13A1-202ENST00000357811 STOX1Q6ZVD7 989 aa24.22■■□□□ 1.47
COL13A1-202ENST00000357811 A0A087WWV3 80 aa24.21■■□□□ 1.47
COL13A1-202ENST00000357811 LEO1Q8WVC0 666 aaPredicted RBP24.21■■□□□ 1.47
COL13A1-202ENST00000357811 NCOA5Q9HCD5 579 aaKnown RBP24.21■■□□□ 1.47
COL13A1-202ENST00000357811 TYRO3Q06418 890 aa24.21■■□□□ 1.47
COL13A1-202ENST00000357811 ATF3P18847 181 aa24.21■■□□□ 1.47
COL13A1-202ENST00000357811 SASS6Q6UVJ0 657 aa24.21■■□□□ 1.47
COL13A1-202ENST00000357811 PODXL2Q9NZ53 605 aa24.21■■□□□ 1.47
COL13A1-202ENST00000357811 PYCARDQ9ULZ3 195 aa24.21■■□□□ 1.47
COL13A1-202ENST00000357811 APOBRQ0VD83 1088 aa24.2■■□□□ 1.46
COL13A1-202ENST00000357811 ANO6Q4KMQ2 910 aa24.2■■□□□ 1.46
COL13A1-202ENST00000357811 C19orf44Q9H6X5 657 aa24.2■■□□□ 1.46
COL13A1-202ENST00000357811 SNRKQ9NRH2 765 aa24.2■■□□□ 1.46
COL13A1-202ENST00000357811 MCMDC2Q4G0Z9 681 aa24.2■■□□□ 1.46
COL13A1-202ENST00000357811 LRRC24Q50LG9 513 aa24.2■■□□□ 1.46
COL13A1-202ENST00000357811 FBXW7Q969H0 707 aa24.2■■□□□ 1.46
COL13A1-202ENST00000357811 MRVI1Q9Y6F6 885 aa24.2■■□□□ 1.46
COL13A1-202ENST00000357811 NBPF26B4DH59 902 aa24.19■■□□□ 1.46
COL13A1-202ENST00000357811 NBPF14Q5TI25 921 aa24.19■■□□□ 1.46
COL13A1-202ENST00000357811 NBPF10Q6P3W6 841 aaKnown RBP24.19■■□□□ 1.46
COL13A1-202ENST00000357811 NBPF15Q8N660 670 aa24.19■■□□□ 1.46
COL13A1-202ENST00000357811 PGBD1Q96JS3 809 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms