RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 COL9A3Q14050 684 aaPredicted RBP18.99■□□□□ 0.63
PHTF1-201ENST00000357783 TJP1Q07157 1748 aa18.98■□□□□ 0.63
PHTF1-201ENST00000357783 PRIM1P49642 420 aaKnown RBP18.98■□□□□ 0.63
PHTF1-201ENST00000357783 SYT1P21579 422 aa18.98■□□□□ 0.63
PHTF1-201ENST00000357783 TAF6LQ9Y6J9 622 aa18.98■□□□□ 0.63
PHTF1-201ENST00000357783 SYCE3A1L190 88 aa18.97■□□□□ 0.63
PHTF1-201ENST00000357783 STX6O43752 255 aa18.97■□□□□ 0.63
PHTF1-201ENST00000357783 ZSCAN22P10073 491 aaPredicted RBP18.97■□□□□ 0.63
PHTF1-201ENST00000357783 CHGBP05060 677 aa18.97■□□□□ 0.63
PHTF1-201ENST00000357783 ZSCAN31Q96LW9 406 aaPredicted RBP18.97■□□□□ 0.63
PHTF1-201ENST00000357783 RBSNQ9H1K0 784 aa18.97■□□□□ 0.63
PHTF1-201ENST00000357783 GADD45BO75293 160 aaPredicted RBP18.96■□□□□ 0.63
PHTF1-201ENST00000357783 ME3Q16798 604 aa18.96■□□□□ 0.63
PHTF1-201ENST00000357783 RNF20Q5VTR2 975 aa18.96■□□□□ 0.63
PHTF1-201ENST00000357783 USP48Q86UV5 1035 aa18.96■□□□□ 0.63
PHTF1-201ENST00000357783 NECAB1Q8N987 351 aa18.96■□□□□ 0.63
PHTF1-201ENST00000357783 TRIM44Q96DX7 344 aaPredicted RBP18.96■□□□□ 0.63
PHTF1-201ENST00000357783 TCEANC2Q96MN5 208 aa18.96■□□□□ 0.63
PHTF1-201ENST00000357783 SH2B1Q9NRF2 756 aaPredicted RBP18.96■□□□□ 0.63
PHTF1-201ENST00000357783 ZNF330Q9Y3S2 320 aaPredicted RBP18.96■□□□□ 0.63
PHTF1-201ENST00000357783 PSMA5P28066 241 aa18.96■□□□□ 0.63
PHTF1-201ENST00000357783 GJB2P29033 226 aa18.96■□□□□ 0.63
PHTF1-201ENST00000357783 TOGARAM1Q9Y4F4 1720 aa18.96■□□□□ 0.62
PHTF1-201ENST00000357783 ST3GAL1Q11201 340 aa18.95■□□□□ 0.62
PHTF1-201ENST00000357783 DDX46Q7L014 1031 aaKnown RBP18.95■□□□□ 0.62
PHTF1-201ENST00000357783 TPCN1Q9ULQ1 816 aa18.95■□□□□ 0.62
PHTF1-201ENST00000357783 TNS2Q63HR2 1409 aa18.95■□□□□ 0.62
PHTF1-201ENST00000357783 TAF5LO75529 589 aa18.95■□□□□ 0.62
PHTF1-201ENST00000357783 BLOC1S2Q6QNY1 142 aa18.95■□□□□ 0.62
PHTF1-201ENST00000357783 ANP32BQ92688 251 aaKnown RBP18.95■□□□□ 0.62
PHTF1-201ENST00000357783 NEUROD6Q96NK8 337 aa18.95■□□□□ 0.62
PHTF1-201ENST00000357783 CCDC129Q6ZRS4 1044 aa18.94■□□□□ 0.62
PHTF1-201ENST00000357783 ATG9AQ7Z3C6 839 aa18.94■□□□□ 0.62
PHTF1-201ENST00000357783 HAUS7Q99871 368 aa18.94■□□□□ 0.62
PHTF1-201ENST00000357783 CNPY2Q9Y2B0 182 aa18.94■□□□□ 0.62
PHTF1-201ENST00000357783 JCADQ9P266 1359 aa18.94■□□□□ 0.62
PHTF1-201ENST00000357783 CCDC173Q0VFZ6 552 aa18.94■□□□□ 0.62
PHTF1-201ENST00000357783 LRSAM1Q6UWE0 723 aa18.94■□□□□ 0.62
PHTF1-201ENST00000357783 ZNF594Q96JF6 807 aaPredicted RBP18.94■□□□□ 0.62
PHTF1-201ENST00000357783 TMOD3Q9NYL9 352 aa18.94■□□□□ 0.62
PHTF1-201ENST00000357783 ZNF609O15014 1411 aa18.94■□□□□ 0.62
PHTF1-201ENST00000357783 CCDC191Q8NCU4 936 aa18.94■□□□□ 0.62
PHTF1-201ENST00000357783 F13A1P00488 732 aa18.93■□□□□ 0.62
PHTF1-201ENST00000357783 SEC62Q99442 399 aaKnown RBP18.93■□□□□ 0.62
PHTF1-201ENST00000357783 TPRNQ4KMQ1 711 aa18.93■□□□□ 0.62
PHTF1-201ENST00000357783 RPS6KB1P23443 525 aa18.92■□□□□ 0.62
PHTF1-201ENST00000357783 TIMM10P62072 90 aa18.92■□□□□ 0.62
PHTF1-201ENST00000357783 LRRC24Q50LG9 513 aa18.92■□□□□ 0.62
PHTF1-201ENST00000357783 HMG20BQ9P0W2 317 aa18.92■□□□□ 0.62
PHTF1-201ENST00000357783 PPP1R9BQ96SB3 815 aa18.91■□□□□ 0.62
PHTF1-201ENST00000357783 RFX7Q2KHR2 1363 aa18.91■□□□□ 0.62
PHTF1-201ENST00000357783 IL15P40933 162 aaPredicted RBP18.91■□□□□ 0.62
PHTF1-201ENST00000357783 ASAP1Q9ULH1 1129 aa18.91■□□□□ 0.62
PHTF1-201ENST00000357783 MTMR6Q9Y217 621 aa18.91■□□□□ 0.62
PHTF1-201ENST00000357783 VPS37CA5D8V6 355 aaPredicted RBP18.9■□□□□ 0.62
PHTF1-201ENST00000357783 ESPNB1AK53 854 aa18.9■□□□□ 0.62
PHTF1-201ENST00000357783 GOLIM4O00461 696 aa18.9■□□□□ 0.62
PHTF1-201ENST00000357783 SYAP1Q96A49 352 aaPredicted RBP18.9■□□□□ 0.62
PHTF1-201ENST00000357783 KAT6BQ8WYB5 2073 aa18.9■□□□□ 0.62
PHTF1-201ENST00000357783 MCMDC2Q4G0Z9 681 aa18.9■□□□□ 0.62
PHTF1-201ENST00000357783 KBTBD3Q8NAB2 608 aa18.9■□□□□ 0.62
PHTF1-201ENST00000357783 TMEM87AQ8NBN3 555 aa18.9■□□□□ 0.62
PHTF1-201ENST00000357783 EYA2O00167 538 aa18.89■□□□□ 0.62
PHTF1-201ENST00000357783 FIBPO43427 364 aa18.89■□□□□ 0.62
PHTF1-201ENST00000357783 USPL1Q5W0Q7 1092 aa18.89■□□□□ 0.62
PHTF1-201ENST00000357783 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.62
PHTF1-201ENST00000357783 NHSL1Q5SYE7 1610 aa18.89■□□□□ 0.61
PHTF1-201ENST00000357783 TOB2Q14106 344 aaPredicted RBP18.89■□□□□ 0.61
PHTF1-201ENST00000357783 ANKRD1Q15327 319 aa18.89■□□□□ 0.61
PHTF1-201ENST00000357783 SLFNL1Q499Z3 407 aa18.89■□□□□ 0.61
PHTF1-201ENST00000357783 PIGBQ92521 554 aa18.89■□□□□ 0.61
PHTF1-201ENST00000357783 PUS3Q9BZE2 481 aaKnown RBP18.89■□□□□ 0.61
PHTF1-201ENST00000357783 ATP6V1DQ9Y5K8 247 aa18.89■□□□□ 0.61
PHTF1-201ENST00000357783 TSGA10IPQ3SY00 556 aa18.88■□□□□ 0.61
PHTF1-201ENST00000357783 ISCA1Q9BUE6 129 aa18.88■□□□□ 0.61
PHTF1-201ENST00000357783 PAG1Q9NWQ8 432 aa18.88■□□□□ 0.61
PHTF1-201ENST00000357783 BTG4Q9NY30 223 aa18.88■□□□□ 0.61
PHTF1-201ENST00000357783 CLCN1P35523 988 aa18.87■□□□□ 0.61
PHTF1-201ENST00000357783 STK3Q13188 491 aa18.87■□□□□ 0.61
PHTF1-201ENST00000357783 TCIRG1Q13488 830 aa18.87■□□□□ 0.61
PHTF1-201ENST00000357783 RNF214Q8ND24 703 aa18.87■□□□□ 0.61
PHTF1-201ENST00000357783 CCDC85AQ96PX6 553 aaPredicted RBP18.87■□□□□ 0.61
PHTF1-201ENST00000357783 GPR108Q9NPR9 543 aa18.87■□□□□ 0.61
PHTF1-201ENST00000357783 U3KPZ7 1027 aaPredicted RBP18.87■□□□□ 0.61
PHTF1-201ENST00000357783 KDM4FA0A1W2PPD8 638 aa18.87■□□□□ 0.61
PHTF1-201ENST00000357783 A0A1B0GUL7 405 aa18.87■□□□□ 0.61
PHTF1-201ENST00000357783 DNM1Q05193 864 aaKnown RBP18.87■□□□□ 0.61
PHTF1-201ENST00000357783 KRT32Q14532 448 aa18.87■□□□□ 0.61
PHTF1-201ENST00000357783 KIF6Q6ZMV9 814 aa18.87■□□□□ 0.61
PHTF1-201ENST00000357783 LARP1BQ659C4 914 aaKnown RBP18.86■□□□□ 0.61
PHTF1-201ENST00000357783 SH3TC1Q8TE82 1336 aa18.86■□□□□ 0.61
PHTF1-201ENST00000357783 CYP21A2P08686 494 aa18.86■□□□□ 0.61
PHTF1-201ENST00000357783 CCDC57Q2TAC2 916 aa18.86■□□□□ 0.61
PHTF1-201ENST00000357783 FAM89AQ96GI7 184 aa18.86■□□□□ 0.61
PHTF1-201ENST00000357783 NEK1Q96PY6 1258 aa18.86■□□□□ 0.61
PHTF1-201ENST00000357783 ALDH8A1Q9H2A2 487 aaPredicted RBP18.86■□□□□ 0.61
PHTF1-201ENST00000357783 PALLDQ8WX93 1383 aa18.86■□□□□ 0.61
PHTF1-201ENST00000357783 CIAO1O76071 339 aa18.85■□□□□ 0.61
PHTF1-201ENST00000357783 ITGB4P16144 1822 aa18.85■□□□□ 0.61
PHTF1-201ENST00000357783 TSPY26PQ9H489 355 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms