RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 SLU7O95391 586 aaKnown RBP12.58□□□□□ -0.39
GTF3C1-201ENST00000356183 PDE1CQ14123 709 aaPredicted RBP12.58□□□□□ -0.39
GTF3C1-201ENST00000356183 TTC36A6NLP5 189 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 ZFYP08048 801 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 CFAP70Q5T0N1 1121 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 ANKRD30BQ9BXX2 1392 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 ZNF444Q8N0Y2 327 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 DDX12PQ92771 950 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 MYD88Q99836 296 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 FERMT1Q9BQL6 677 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 SYT1P21579 422 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 ATP11AP98196 1134 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 FLIIQ13045 1269 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 CEP85LQ5SZL2 805 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 DZIP1Q86YF9 867 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 FAM184BQ9ULE4 1060 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 ERCC3P19447 782 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 ARID5AQ03989 594 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 CATIPQ7Z7H3 387 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 SLC12A5Q9H2X9 1139 aa12.58□□□□□ -0.4
GTF3C1-201ENST00000356183 AKR1B10O60218 316 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 BUB1BO60566 1050 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 CYLC1P35663 651 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 TTC12Q9H892 705 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 USP48Q86UV5 1035 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 UBLCP1Q8WVY7 318 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 SNX21Q969T3 373 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 SYNCQ9H7C4 482 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 FEZ2Q9UHY8 353 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 TBC1D9Q6ZT07 1266 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 SLC26A6Q9BXS9 759 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 FAM114A2Q9NRY5 505 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 CLNS1AP54105 237 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 SF3B2Q13435 895 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 ZNF287Q9HBT7 754 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 TCP11L1Q9NUJ3 509 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 BICD1Q96G01 975 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 SAMD15Q9P1V8 674 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 AKAP2Q9Y2D5 859 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
GTF3C1-201ENST00000356183 TOM1L2Q6ZVM7 507 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 CCDC50Q8IVM0 306 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 OGFRQ9NZT2 677 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 LACTBP83111 547 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 FAM76AQ8TAV0 307 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 SYKP43405 635 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 PPARDQ03181 441 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 WDR78Q5VTH9 848 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 CCDC102BQ68D86 513 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 KANK3Q6NY19 840 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 FAM69CQ0P6D2 419 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 AFAP1Q8N556 730 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 STMN2Q93045 179 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 NESP48681 1621 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 NDC80O14777 642 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 CIB2O75838 187 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 SYT10Q6XYQ8 523 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 DNAJC25Q9H1X3 360 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 TMEM67Q5HYA8 995 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 ZNF569Q5MCW4 686 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 TSHZ3Q63HK5 1081 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 TTC14Q96N46 770 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 RABEP2Q9H5N1 569 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 MRVI1Q9Y6F6 885 aa12.56□□□□□ -0.4
GTF3C1-201ENST00000356183 PCK1P35558 622 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 IQCA1Q86XH1 822 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 LZTFL1Q9NQ48 299 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 RAB3GAP1Q15042 981 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 THUMPD2Q9BTF0 503 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 CAVIN4Q5BKX8 364 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 CABP1Q9NZU7 370 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 SAMM50Q9Y512 469 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 TLDC2A0PJX2 215 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 HAND2P61296 217 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 STIM2Q9P246 746 aa12.55□□□□□ -0.4
GTF3C1-201ENST00000356183 TACC1O75410 805 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 ZSCAN22P10073 491 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 PRIM1P49642 420 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 MCM10Q7L590 875 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 CTAGE1Q96RT6 745 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 EHMT1Q9H9B1 1298 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 EEF2P13639 858 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 GBP1P32455 592 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 METAP2P50579 478 aaKnown RBP eCLIP12.54□□□□□ -0.41e-6■□□□□ 10.5
GTF3C1-201ENST00000356183 GRIN2BQ13224 1484 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 GOLIM4O00461 696 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 CCDC77Q9BR77 488 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 GUCA1BQ9UMX6 200 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 CAVIN2O95810 425 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 VIMP08670 466 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 STAT6P42226 847 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 CFAP157Q5JU67 520 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms