RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 SASS6Q6UVJ0 657 aa14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 TFIP11Q9UBB9 837 aaKnown RBP14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 LIMCH1Q9UPQ0 1083 aa14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 R3HCC1Q9Y3T6 440 aaKnown RBP14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 ERVV-2B6SEH9 535 aa14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 XBP1P17861 261 aa14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 BEND3Q5T5X7 828 aa14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 GRPEL1Q9HAV7 217 aa14.57□□□□□ -0.08
PCDHB11-201ENST00000354757 PIK3C2BO00750 1634 aa14.56□□□□□ -0.08
PCDHB11-201ENST00000354757 ARHGEF40Q8TER5 1519 aa14.56□□□□□ -0.08
PCDHB11-201ENST00000354757 MPHOSPH10O00566 681 aaKnown RBP14.56□□□□□ -0.08
PCDHB11-201ENST00000354757 CCDC191Q8NCU4 936 aa14.56□□□□□ -0.08
PCDHB11-201ENST00000354757 FAM227BQ96M60 508 aa14.56□□□□□ -0.08
PCDHB11-201ENST00000354757 EYA2O00167 538 aa14.56□□□□□ -0.08
PCDHB11-201ENST00000354757 IFIT3O14879 490 aaKnown RBP14.56□□□□□ -0.08
PCDHB11-201ENST00000354757 CYP7A1P22680 504 aa14.56□□□□□ -0.08
PCDHB11-201ENST00000354757 TRAPPC3LQ5T215 181 aa14.56□□□□□ -0.08
PCDHB11-201ENST00000354757 RIMBP2O15034 1052 aa14.55□□□□□ -0.08
PCDHB11-201ENST00000354757 KRT85P78386 507 aa14.55□□□□□ -0.08
PCDHB11-201ENST00000354757 TMX3Q96JJ7 454 aa14.55□□□□□ -0.08
PCDHB11-201ENST00000354757 QRICH2Q9H0J4 1663 aa14.55□□□□□ -0.08
PCDHB11-201ENST00000354757 CDK12Q9NYV4 1490 aaPredicted RBP14.55□□□□□ -0.08
PCDHB11-201ENST00000354757 TNPO1Q92973 898 aaKnown RBP14.55□□□□□ -0.08
PCDHB11-201ENST00000354757 GOLGA8BA8MQT2 603 aa14.55□□□□□ -0.08
PCDHB11-201ENST00000354757 XRCC6P12956 609 aaKnown RBP eCLIP14.55□□□□□ -0.08
PCDHB11-201ENST00000354757 NEK1Q96PY6 1258 aa14.55□□□□□ -0.08
PCDHB11-201ENST00000354757 ZSCAN31Q96LW9 406 aaPredicted RBP14.55□□□□□ -0.08
PCDHB11-201ENST00000354757 PTPRUQ92729 1446 aa14.54□□□□□ -0.08
PCDHB11-201ENST00000354757 LOC102724428A0A0B4J2F2 783 aa14.54□□□□□ -0.08
PCDHB11-201ENST00000354757 SIK1P57059 783 aa14.54□□□□□ -0.08
PCDHB11-201ENST00000354757 TNNI3KQ59H18 835 aa14.54□□□□□ -0.08
PCDHB11-201ENST00000354757 FPGT-TNNI3KV9GXZ4 949 aa14.54□□□□□ -0.08
PCDHB11-201ENST00000354757 PIGBQ92521 554 aa14.54□□□□□ -0.08
PCDHB11-201ENST00000354757 CDCA7Q9BWT1 371 aaPredicted RBP14.54□□□□□ -0.08
PCDHB11-201ENST00000354757 BRMS1Q9HCU9 246 aa14.54□□□□□ -0.08
PCDHB11-201ENST00000354757 FRMPD1Q5SYB0 1578 aa14.54□□□□□ -0.08
PCDHB11-201ENST00000354757 KINO60870 393 aaKnown RBP14.54□□□□□ -0.08
PCDHB11-201ENST00000354757 ST5P78524 1137 aa14.53□□□□□ -0.08
PCDHB11-201ENST00000354757 TCIRG1Q13488 830 aa14.53□□□□□ -0.08
PCDHB11-201ENST00000354757 EAF2Q96CJ1 260 aaPredicted RBP14.53□□□□□ -0.08
PCDHB11-201ENST00000354757 ZGPATQ8N5A5 531 aaKnown RBP14.53□□□□□ -0.08
PCDHB11-201ENST00000354757 SPATA32Q96LK8 384 aa14.53□□□□□ -0.08
PCDHB11-201ENST00000354757 NASPP49321 788 aaPredicted RBP14.53□□□□□ -0.08
PCDHB11-201ENST00000354757 MCMDC2Q4G0Z9 681 aa14.53□□□□□ -0.08
PCDHB11-201ENST00000354757 SIRT2Q8IXJ6 389 aa14.52□□□□□ -0.08
PCDHB11-201ENST00000354757 TCEAL9Q9UHQ7 104 aa14.52□□□□□ -0.08
PCDHB11-201ENST00000354757 GSPT1P15170 499 aaKnown RBP14.52□□□□□ -0.08
PCDHB11-201ENST00000354757 LRRC24Q50LG9 513 aa14.52□□□□□ -0.08
PCDHB11-201ENST00000354757 CRACR2BQ8N4Y2 399 aaPredicted RBP14.52□□□□□ -0.08
PCDHB11-201ENST00000354757 CAMK4Q16566 473 aa14.52□□□□□ -0.09
PCDHB11-201ENST00000354757 MSL1Q68DK7 614 aa14.52□□□□□ -0.09
PCDHB11-201ENST00000354757 CPS1P31327 1500 aa14.52□□□□□ -0.09
PCDHB11-201ENST00000354757 MBD3O95983 291 aa14.52□□□□□ -0.09
PCDHB11-201ENST00000354757 GJB2P29033 226 aa14.52□□□□□ -0.09
PCDHB11-201ENST00000354757 CNBD1Q8NA66 436 aa14.52□□□□□ -0.09
PCDHB11-201ENST00000354757 QTRT2Q9H974 415 aaKnown RBP14.52□□□□□ -0.09
PCDHB11-201ENST00000354757 SMIM5Q71RC9 77 aa14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 MAGEB6Q8N7X4 407 aa14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 STX8Q9UNK0 236 aa14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 RXRAP19793 462 aa14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 PUS3Q9BZE2 481 aaKnown RBP14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 SLC4A4Q9Y6R1 1079 aa14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 CPSF1Q10570 1443 aaKnown RBP14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 ANKARQ7Z5J8 1434 aa14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 APBA3O96018 575 aa14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 UQCRFS1P1P0C7P4 283 aa14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 TTF1Q15361 905 aaPredicted RBP14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 XAGE2Q96GT9 111 aa14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 TTC41PQ6P2S7 1318 aa14.51□□□□□ -0.09
PCDHB11-201ENST00000354757 TRIM37O94972 964 aa14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 TMEM67Q5HYA8 995 aa14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 SSH3Q8TE77 659 aa14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 USP26Q9BXU7 913 aa14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 CIZ1Q9ULV3 898 aaPredicted RBP14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 AGLP35573 1532 aa14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 PDE4CQ08493 712 aa14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 SLC12A7Q9Y666 1083 aa14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 PDE8AO60658 829 aa14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 NAA16Q6N069 864 aaPredicted RBP14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 IQCA1Q86XH1 822 aa14.5□□□□□ -0.09
PCDHB11-201ENST00000354757 SYCE3A1L190 88 aa14.49□□□□□ -0.09
PCDHB11-201ENST00000354757 TSPY2A6NKD2 308 aa14.49□□□□□ -0.09
PCDHB11-201ENST00000354757 CRKLP46109 303 aaKnown RBP14.49□□□□□ -0.09
PCDHB11-201ENST00000354757 ZNF444Q8N0Y2 327 aaPredicted RBP14.49□□□□□ -0.09
PCDHB11-201ENST00000354757 VAT1LQ9HCJ6 419 aa14.49□□□□□ -0.09
PCDHB11-201ENST00000354757 PICALMQ13492 652 aa14.49□□□□□ -0.09
PCDHB11-201ENST00000354757 KLF18A0A0U1RQI7 1052 aa14.49□□□□□ -0.09
PCDHB11-201ENST00000354757 UNC5CLQ8IV45 518 aa14.49□□□□□ -0.09
PCDHB11-201ENST00000354757 C8orf76Q96K31 380 aa14.49□□□□□ -0.09
PCDHB11-201ENST00000354757 GOLGA8AA7E2F4 631 aa14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 C1orf167Q5SNV9 1468 aa14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 MFSD6Q6ZSS7 791 aa14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 ZNF396Q96N95 335 aaPredicted RBP14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 SEC62Q99442 399 aaKnown RBP14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 TLR7Q9NYK1 1049 aaKnown RBP14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 SYNE4Q8N205 404 aa14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 AK2P54819 239 aa14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 USPL1Q5W0Q7 1092 aa14.48□□□□□ -0.09
PCDHB11-201ENST00000354757 CREB3L3Q68CJ9 461 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms