RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 USP21Q9UK80 565 aa12.96□□□□□ -0.33
SLC6A20-201ENST00000353278 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.33
SLC6A20-201ENST00000353278 TBCAO75347 108 aaKnown RBP12.96□□□□□ -0.34
SLC6A20-201ENST00000353278 HOXC9P31274 260 aa12.96□□□□□ -0.34
SLC6A20-201ENST00000353278 SLAIN2Q9P270 581 aa12.96□□□□□ -0.34
SLC6A20-201ENST00000353278 ANAPC15P60006 121 aa12.96□□□□□ -0.34
SLC6A20-201ENST00000353278 EYA1Q99502 592 aa12.96□□□□□ -0.34
SLC6A20-201ENST00000353278 GJA3Q9Y6H8 435 aa12.96□□□□□ -0.34
SLC6A20-201ENST00000353278 LDHBP07195 334 aaKnown RBP12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 ARHGEF10O15013 1369 aa12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 ITSN2Q9NZM3 1697 aa12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 PLS1Q14651 629 aa12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 FAM98CQ17RN3 349 aaKnown RBP12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 TCERG1LQ5VWI1 586 aa12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 FAM177A1Q8N128 213 aaPredicted RBP12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 ATP10AO60312 1499 aa12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 EZRP15311 586 aaKnown RBP12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 GNAT2P19087 354 aa12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 RNMTO43148 476 aaKnown RBP12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 ZBTB43O43298 467 aa12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 SMARCC2Q8TAQ2 1214 aa12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 BICD1Q96G01 975 aa12.95□□□□□ -0.34
SLC6A20-201ENST00000353278 CCDC174Q6PII3 467 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 MEIS3Q99687 375 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 CCDC40Q4G0X9 1142 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 FERMT2Q96AC1 680 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 BIN2Q9UBW5 565 aaPredicted RBP12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 CTAGE5O15320 804 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 BEGAINQ9BUH8 593 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 ABCC1P33527 1531 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 MAP3K19Q56UN5 1328 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 BMP15O95972 392 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 ORAI2Q96SN7 254 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 SH2D4AQ9H788 454 aa12.94□□□□□ -0.34
SLC6A20-201ENST00000353278 ERLIN1O75477 346 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 CA8P35219 290 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 TTC6Q86TZ1 520 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 YTHDC2Q9H6S0 1430 aaKnown RBP12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 SH3TC1Q8TE82 1336 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 USP37Q86T82 979 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 GBP2P32456 591 aaPredicted RBP12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 MCM9Q9NXL9 1143 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 H0YIN7 160 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 MTIF2P46199 727 aaKnown RBP12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 RTN1Q16799 776 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 BMP2KLQ5H9B9 411 aa12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 HELBQ8NG08 1087 aaPredicted RBP12.93□□□□□ -0.34
SLC6A20-201ENST00000353278 APBA3O96018 575 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 C20orf194Q5TEA3 1177 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 PDE6BP35913 854 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 CAMK4Q16566 473 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 MCMDC2Q4G0Z9 681 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 CCDC191Q8NCU4 936 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 C6orf50Q9HD87 102 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 ATP8B2P98198 1209 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 NCBP1Q09161 790 aaKnown RBP12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 KANK3Q6NY19 840 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 CCDC87Q9NVE4 849 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 ENOX2Q16206 610 aaKnown RBP12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 FSIP1Q8NA03 581 aa12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 DDX21Q9NR30 783 aaKnown RBP eCLIP12.92□□□□□ -0.34
SLC6A20-201ENST00000353278 UFL1O94874 794 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 TDRD12Q587J7 1177 aaKnown RBP12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 HEATR3Q7Z4Q2 680 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 CCDC112Q8NEF3 446 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 STX6O43752 255 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 USP8P40818 1118 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 HOOK2Q96ED9 719 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 ASXL1Q8IXJ9 1541 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 SPDYE3A6NKU9 549 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 CALM1P0DP23 149 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 CALM2P0DP24 149 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 CALM3P0DP25 149 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 SFPQP23246 707 aaKnown RBP eCLIP12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 RAB11FIP4Q86YS3 637 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 C8orf58Q8NAV2 365 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 SUPT20HQ8NEM7 779 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 RBM25P49756 843 aaKnown RBP12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 NAPAP54920 295 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 TTC22Q5TAA0 569 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 FAM114A1Q8IWE2 563 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 LARGE2Q8N3Y3 721 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 BRF1Q92994 677 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 PAG1Q9NWQ8 432 aa12.91□□□□□ -0.34
SLC6A20-201ENST00000353278 UGGT2Q9NYU1 1516 aa12.9□□□□□ -0.34
SLC6A20-201ENST00000353278 TAX1BP1Q86VP1 789 aa12.9□□□□□ -0.34
SLC6A20-201ENST00000353278 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
SLC6A20-201ENST00000353278 DENND2AQ9ULE3 1009 aa12.9□□□□□ -0.34
SLC6A20-201ENST00000353278 TSHZ3Q63HK5 1081 aa12.9□□□□□ -0.34
SLC6A20-201ENST00000353278 MCM4P33991 863 aa12.9□□□□□ -0.34
SLC6A20-201ENST00000353278 ANKRD44Q8N8A2 993 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms