RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 AFDNP55196 1824 aaKnown RBP29.12■■■□□ 2.25
CPNE1-202ENST00000352393 KDM6AO15550 1401 aaPredicted RBP29.12■■■□□ 2.25
CPNE1-202ENST00000352393 HMGN5P82970 282 aaKnown RBP29.12■■■□□ 2.25
CPNE1-202ENST00000352393 SCAND2PQ9GZW5 306 aaPredicted RBP29.12■■■□□ 2.25
CPNE1-202ENST00000352393 GTF2F1P35269 517 aaKnown RBP eCLIP29.11■■■□□ 2.256e-10■■■□□ 14.7
CPNE1-202ENST00000352393 NEXNQ0ZGT2 675 aa29.11■■■□□ 2.25
CPNE1-202ENST00000352393 MRVI1Q9Y6F6 885 aa29.11■■■□□ 2.25
CPNE1-202ENST00000352393 COL15A1P39059 1388 aa29.11■■■□□ 2.25
CPNE1-202ENST00000352393 PLCB2Q00722 1185 aa29.11■■■□□ 2.25
CPNE1-202ENST00000352393 ZNF790Q6PG37 636 aa29.11■■■□□ 2.25
CPNE1-202ENST00000352393 TYRO3Q06418 890 aa29.1■■■□□ 2.25
CPNE1-202ENST00000352393 KIAA1524Q8TCG1 905 aa29.1■■■□□ 2.25
CPNE1-202ENST00000352393 COPRSQ9NQ92 184 aa29.1■■■□□ 2.25
CPNE1-202ENST00000352393 NPHP3Q7Z494 1330 aa29.1■■■□□ 2.25
CPNE1-202ENST00000352393 ORAI2Q96SN7 254 aa29.09■■■□□ 2.25
CPNE1-202ENST00000352393 METTL22Q9BUU2 404 aaPredicted RBP29.09■■■□□ 2.25
CPNE1-202ENST00000352393 ATP5JP18859 108 aa29.09■■■□□ 2.25
CPNE1-202ENST00000352393 XAGE3Q8WTP9 111 aa29.09■■■□□ 2.25
CPNE1-202ENST00000352393 ZMYND15Q9H091 742 aa29.09■■■□□ 2.25
CPNE1-202ENST00000352393 KRT32Q14532 448 aa29.08■■■□□ 2.25
CPNE1-202ENST00000352393 RBM43Q6ZSC3 357 aaKnown RBP29.08■■■□□ 2.25
CPNE1-202ENST00000352393 EDC3Q96F86 508 aaKnown RBP29.08■■■□□ 2.25
CPNE1-202ENST00000352393 LEO1Q8WVC0 666 aaPredicted RBP29.08■■■□□ 2.25
CPNE1-202ENST00000352393 SPATA32Q96LK8 384 aa29.08■■■□□ 2.25
CPNE1-202ENST00000352393 DBNLQ9UJU6 430 aaKnown RBP29.08■■■□□ 2.25
CPNE1-202ENST00000352393 ARFGEF2Q9Y6D5 1785 aa29.07■■■□□ 2.24
CPNE1-202ENST00000352393 ERBB3P21860 1342 aa29.07■■■□□ 2.24
CPNE1-202ENST00000352393 RFX5P48382 616 aaPredicted RBP29.07■■■□□ 2.24
CPNE1-202ENST00000352393 SLC39A6Q13433 755 aa29.07■■■□□ 2.24
CPNE1-202ENST00000352393 GTF3C6Q969F1 213 aa29.07■■■□□ 2.24
CPNE1-202ENST00000352393 MYD88Q99836 296 aa29.07■■■□□ 2.24
CPNE1-202ENST00000352393 SLC52A2Q9HAB3 445 aa29.07■■■□□ 2.24
CPNE1-202ENST00000352393 DDX19AQ9NUU7 478 aaKnown RBP29.07■■■□□ 2.24
CPNE1-202ENST00000352393 ZNF609O15014 1411 aa29.06■■■□□ 2.24
CPNE1-202ENST00000352393 DACT1Q9NYF0 836 aa29.06■■■□□ 2.24
CPNE1-202ENST00000352393 PYCARDQ9ULZ3 195 aa29.06■■■□□ 2.24
CPNE1-202ENST00000352393 MYH15Q9Y2K3 1946 aa29.06■■■□□ 2.24
CPNE1-202ENST00000352393 GOLGA6L6A8MZA4 724 aa29.06■■■□□ 2.24
CPNE1-202ENST00000352393 MYL6BP14649 208 aa29.06■■■□□ 2.24
CPNE1-202ENST00000352393 CAMK4Q16566 473 aa29.06■■■□□ 2.24
CPNE1-202ENST00000352393 CHMP3Q9Y3E7 222 aa29.06■■■□□ 2.24
CPNE1-202ENST00000352393 STK3Q13188 491 aa29.05■■■□□ 2.24
CPNE1-202ENST00000352393 TNNI3KQ59H18 835 aa29.05■■■□□ 2.24
CPNE1-202ENST00000352393 TNMDQ9H2S6 317 aa29.05■■■□□ 2.24
CPNE1-202ENST00000352393 CLSTN2Q9H4D0 955 aa29.05■■■□□ 2.24
CPNE1-202ENST00000352393 FPGT-TNNI3KV9GXZ4 949 aa29.05■■■□□ 2.24
CPNE1-202ENST00000352393 ADAMTSL3P82987 1691 aa29.05■■■□□ 2.24
CPNE1-202ENST00000352393 KIF1AQ12756 1690 aa29.05■■■□□ 2.24
CPNE1-202ENST00000352393 COPS6Q7L5N1 327 aa29.05■■■□□ 2.24
CPNE1-202ENST00000352393 LRP10Q7Z4F1 713 aa29.05■■■□□ 2.24
CPNE1-202ENST00000352393 MST1RQ04912 1400 aa29.04■■■□□ 2.24
CPNE1-202ENST00000352393 LAMA4Q16363 1823 aa29.04■■■□□ 2.24
CPNE1-202ENST00000352393 PTPN12Q05209 780 aaKnown RBP29.03■■■□□ 2.24
CPNE1-202ENST00000352393 SPC24Q8NBT2 197 aa29.03■■■□□ 2.24
CPNE1-202ENST00000352393 TFIP11Q9UBB9 837 aaKnown RBP29.03■■■□□ 2.24
CPNE1-202ENST00000352393 ALS2Q96Q42 1657 aa29.03■■■□□ 2.24
CPNE1-202ENST00000352393 RESTQ13127 1097 aa29.03■■■□□ 2.24
CPNE1-202ENST00000352393 RABL6Q3YEC7 729 aaPredicted RBP29.03■■■□□ 2.24
CPNE1-202ENST00000352393 NEK1Q96PY6 1258 aa29.03■■■□□ 2.24
CPNE1-202ENST00000352393 ABCC6O95255 1503 aa29.02■■■□□ 2.24
CPNE1-202ENST00000352393 JAK2O60674 1132 aa29.02■■■□□ 2.24
CPNE1-202ENST00000352393 LUZP1Q86V48 1076 aa29.02■■■□□ 2.24
CPNE1-202ENST00000352393 GOLGA6L4A6NEF3 574 aa29.02■■■□□ 2.24
CPNE1-202ENST00000352393 TFCP2Q12800 502 aa29.02■■■□□ 2.24
CPNE1-202ENST00000352393 LMOD2Q6P5Q4 547 aa29.02■■■□□ 2.24
CPNE1-202ENST00000352393 CKAP2LQ8IYA6 745 aa29.02■■■□□ 2.24
CPNE1-202ENST00000352393 CBX8Q9HC52 389 aa29.02■■■□□ 2.24
CPNE1-202ENST00000352393 U3KPZ7 1027 aaPredicted RBP29.02■■■□□ 2.24
CPNE1-202ENST00000352393 ANO6Q4KMQ2 910 aa29.01■■■□□ 2.23
CPNE1-202ENST00000352393 PGBD1Q96JS3 809 aa29■■■□□ 2.23
CPNE1-202ENST00000352393 ZNF710Q8N1W2 664 aa29■■■□□ 2.23
CPNE1-202ENST00000352393 JARID2Q92833 1246 aaPredicted RBP29■■■□□ 2.23
CPNE1-202ENST00000352393 BRF1Q92994 677 aa29■■■□□ 2.23
CPNE1-202ENST00000352393 ZNF496Q96IT1 587 aaPredicted RBP29■■■□□ 2.23
CPNE1-202ENST00000352393 PHKG2P15735 406 aa28.99■■■□□ 2.23
CPNE1-202ENST00000352393 ANKRD13DQ6ZTN6 518 aa28.99■■■□□ 2.23
CPNE1-202ENST00000352393 LAMB4A4D0S4 1761 aa28.99■■■□□ 2.23
CPNE1-202ENST00000352393 MEGF6O75095 1541 aa28.98■■■□□ 2.23
CPNE1-202ENST00000352393 GLI3P10071 1580 aa28.98■■■□□ 2.23
CPNE1-202ENST00000352393 Q6ZUG5 572 aa28.98■■■□□ 2.23
CPNE1-202ENST00000352393 TDRD7Q8NHU6 1098 aaKnown RBP28.98■■■□□ 2.23
CPNE1-202ENST00000352393 RAPGEF4Q8WZA2 1011 aa28.98■■■□□ 2.23
CPNE1-202ENST00000352393 HAUS7Q99871 368 aa28.98■■■□□ 2.23
CPNE1-202ENST00000352393 CYP21A2P08686 494 aa28.97■■■□□ 2.23
CPNE1-202ENST00000352393 CCDC129Q6ZRS4 1044 aa28.97■■■□□ 2.23
CPNE1-202ENST00000352393 NFATC2IPQ8NCF5 419 aa28.97■■■□□ 2.23
CPNE1-202ENST00000352393 NR1I2O75469 434 aa28.97■■■□□ 2.23
CPNE1-202ENST00000352393 PTGS1P23219 599 aa28.97■■■□□ 2.23
CPNE1-202ENST00000352393 TSC1Q92574 1164 aa28.97■■■□□ 2.23
CPNE1-202ENST00000352393 DBNDD2Q9BQY9 259 aa28.97■■■□□ 2.23
CPNE1-202ENST00000352393 NDUFB9Q9Y6M9 179 aa28.97■■■□□ 2.23
CPNE1-202ENST00000352393 MCMDC2Q4G0Z9 681 aa28.96■■■□□ 2.23
CPNE1-202ENST00000352393 KRT28Q7Z3Y7 464 aa28.96■■■□□ 2.23
CPNE1-202ENST00000352393 KIF3AQ9Y496 699 aa28.96■■■□□ 2.23
CPNE1-202ENST00000352393 CHGBP05060 677 aa28.96■■■□□ 2.23
CPNE1-202ENST00000352393 UBE3BQ7Z3V4 1068 aa28.96■■■□□ 2.23
CPNE1-202ENST00000352393 PLA2G4DQ86XP0 818 aa28.96■■■□□ 2.23
CPNE1-202ENST00000352393 SMARCC2Q8TAQ2 1214 aa28.96■■■□□ 2.23
CPNE1-202ENST00000352393 SEC62Q99442 399 aaKnown RBP28.96■■■□□ 2.23
CPNE1-202ENST00000352393 SH3TC1Q8TE82 1336 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 228.5 ms